Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069312
CDS Infomation

pacid=37451092 polypeptide=PGSC0003DMP400046799 locus=PGSC0003DMG400026962 ID=PGSC0003DMT400069312.v4.03 annot-version=v4.03
Sequence

ATGGAATACGGCACCGGAGGTGGTGGTGGTGGTGGTGGTGGAGCTTCGTCAAGTGGCGGT
GACGCCACAGATGCTCACCGGAAGAAGAAACGTTTCCATCGACATACAGCTCATCAAATT
CAAAGCCTTGAATCTGTGTTCAAGGAATGTCCACATCCAGACGAGAAAATTAGATTGCAG
TTGAGTAGAGATTTGGGTTTGGCTCCTCGTCAAATAAAGTTTTGGTTCCAAAATAGGAGG
ACTCAATTGAAGAGTCAACATGAGAGAGCAGATAATAGTGCACTTCGATCAGAAAATGAT
AGAATTCGATGTGAAAACATCGCGATAAGGGAAGCAATCAAGAATGTGATATGTCCATCT
TGTGGAGGTCCTCCAGTTACTGAAGACACTTATTTTGATGAACAAAAATTGAGAATGGAG
AATTTGCAACTAAAAGAGGAGCTTGACAAAATTTCAAGCATTGCTGCAAAGTATATGGGG
AGGCCTATTTCGCAACTTCCACCAGTGCAACCTGTTCATTTGTCCTCACTTAACTTAATG
TCCATGCCTAATTTTGGACTAACTGGTCCTTCACTTGATCTTGATCTTCTCCCTGGAAGT
TTGAGTACTTATCCAAATTTACCATGTCCTACATTGAACATATCAGACATGGATAAGTCC
CTTATGGCTGATATTGCTGGCAATGCCATGGAAGAACTGATTAGGCTTTTACAAACTAAC
GAACCTTTGTGGACAAAGTCCACAGCTGATGGCAGAGATGTACTTGACATCGATAACTAT
GACCAGATTTTTCCAAAGGCTAACAGTTCGTTGAAAAATCCAAATGTTCGTGTTGAGGCT
TCCAGGCAATCAGGTGTTGTGATCATGAATGGTTTGGCCTTAGTCGACATGTTCATGGAT
GTGAATAAATGGGTGGAATTCTTTCCTACAATTGTTTCAAAGGCAAGAACACTTGAAGTA
ATATCATGTGGCATGATGGGCAGTCGGAGTAGTACATTACAATTGATGTATGAAGAACAG
CAAGTGCTTTCGCCATTAGTCCCAACACGACAATTCTACTTCCTACGGTTTTGCCAGCAG
ATTGAGACGGGCTCGTGGGCAATTGTTGATGTTTCCTATGATATTACTCAAGAAAATATG
TACCCTCCCTCTTCTTGTAAGGTTCATAAGCTCCCATCTGGATGTTTGATACAAGACATG
CCCAATGGTTATTCCAAGGTAACTTGGTTGGAACATGTTGAAGTGGAAGAGAAAGGTTCA
ATTCATAGGCTATATAGAGATCTTATATATAGTGGTATGGCATTTGGAGCAGAGAGATGG
CTTGGTTCTCTTCAGAGATTGTGTGAGAGATATGCTTGTTTAATGGTTAGCGGCAACTCT
TCTCGTGAACTTGGAGGAGTGATTCCGTCACCAGAAGGGAAGAAAAGCATGATGAAAGTG
GCTCAAAGAATGGTGAGCAGTTTCTGTGCCAGCATAAATCCGTCCAATGGACACCAGTGG
AACAACATTTCTACATTGGATGAATTTGAAGTTAGAGCCACCCTTCAAAAGTGCACAGAT
CCTGGCCAGCCCAATGGTGTAGTCATCAGTGCAGCTTCCACTATTTGGCTCCCAGTTCCT
CCACAACATGTTTTCAATTTCCTCAGGGACGAAAGGACTCGACCTCAGTGGGATGTTCTT
TCCAACCAAAATCCAGTACAAGAGGTAGCTCACATTGCAAATGGCTCTCACCCAGGGAAT
TCTATTTCTGTGCTCAGGGCCTATAACACTAGCCAGAATAACATGTTGATACTTCAAGAA
AGTTGCATAGACTCATCAGGTTCACTAGTAGTCTACAGTCCTGTTGATTTACAATCCATC
AACATTGCAATGAGTGGTGAAGACACCACCTACATCCCTTTGCTCCCCTCAGGTTTCACA
ATATCACAAGATGGACGAGGGTCCAACGAGGCATTATCGATGAATAATGGTAGTACCATG
GGAGGAGCAGGTGCAGGGGGGTCACTAGTGACAGTAGTGTTTCAGATATTGGTAAGCAGT
TTATCATCATCAGCCAAAATGAGCCCAGAATCAGTAAACACAGTTAATAACCTTATAGGC
AACACTATCCACCAAATTAAAACTGCCTTGAATTGCTCCACTTCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046799
PEP Infomation

pacid=37451092 transcript=PGSC0003DMT400069312 locus=PGSC0003DMG400026962 ID=PGSC0003DMT400069312.v4.03 annot-version=v4.03
Sequence

MEYGTGGGGGGGGGASSSGGDATDAHRKKKRFHRHTAHQIQSLESVFKECPHPDEKIRLQ
LSRDLGLAPRQIKFWFQNRRTQLKSQHERADNSALRSENDRIRCENIAIREAIKNVICPS
CGGPPVTEDTYFDEQKLRMENLQLKEELDKISSIAAKYMGRPISQLPPVQPVHLSSLNLM
SMPNFGLTGPSLDLDLLPGSLSTYPNLPCPTLNISDMDKSLMADIAGNAMEELIRLLQTN
EPLWTKSTADGRDVLDIDNYDQIFPKANSSLKNPNVRVEASRQSGVVIMNGLALVDMFMD
VNKWVEFFPTIVSKARTLEVISCGMMGSRSSTLQLMYEEQQVLSPLVPTRQFYFLRFCQQ
IETGSWAIVDVSYDITQENMYPPSSCKVHKLPSGCLIQDMPNGYSKVTWLEHVEVEEKGS
IHRLYRDLIYSGMAFGAERWLGSLQRLCERYACLMVSGNSSRELGGVIPSPEGKKSMMKV
AQRMVSSFCASINPSNGHQWNNISTLDEFEVRATLQKCTDPGQPNGVVISAASTIWLPVP
PQHVFNFLRDERTRPQWDVLSNQNPVQEVAHIANGSHPGNSISVLRAYNTSQNNMLILQE
SCIDSSGSLVVYSPVDLQSINIAMSGEDTTYIPLLPSGFTISQDGRGSNEALSMNNGSTM
GGAGAGGSLVTVVFQILVSSLSSSAKMSPESVNTVNNLIGNTIHQIKTALNCSTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400069312
Transcript Infomation

pacid=37451092 locus=PGSC0003DMG400026962 ID=PGSC0003DMT400069312.v4.03 annot-version=v4.03
Sequence

ATGGAATACGGCACCGGAGGTGGTGGTGGTGGTGGTGGTGGAGCTTCGTCAAGTGGCGGT
GACGCCACAGATGCTCACCGGAAGAAGAAACGTTTCCATCGACATACAGCTCATCAAATT
CAAAGCCTTGAATCTGTGTTCAAGGAATGTCCACATCCAGACGAGAAAATTAGATTGCAG
TTGAGTAGAGATTTGGGTTTGGCTCCTCGTCAAATAAAGTTTTGGTTCCAAAATAGGAGG
ACTCAATTGAAGAGTCAACATGAGAGAGCAGATAATAGTGCACTTCGATCAGAAAATGAT
AGAATTCGATGTGAAAACATCGCGATAAGGGAAGCAATCAAGAATGTGATATGTCCATCT
TGTGGAGGTCCTCCAGTTACTGAAGACACTTATTTTGATGAACAAAAATTGAGAATGGAG
AATTTGCAACTAAAAGAGGAGCTTGACAAAATTTCAAGCATTGCTGCAAAGTATATGGGG
AGGCCTATTTCGCAACTTCCACCAGTGCAACCTGTTCATTTGTCCTCACTTAACTTAATG
TCCATGCCTAATTTTGGACTAACTGGTCCTTCACTTGATCTTGATCTTCTCCCTGGAAGT
TTGAGTACTTATCCAAATTTACCATGTCCTACATTGAACATATCAGACATGGATAAGTCC
CTTATGGCTGATATTGCTGGCAATGCCATGGAAGAACTGATTAGGCTTTTACAAACTAAC
GAACCTTTGTGGACAAAGTCCACAGCTGATGGCAGAGATGTACTTGACATCGATAACTAT
GACCAGATTTTTCCAAAGGCTAACAGTTCGTTGAAAAATCCAAATGTTCGTGTTGAGGCT
TCCAGGCAATCAGGTGTTGTGATCATGAATGGTTTGGCCTTAGTCGACATGTTCATGGAT
GTGAATAAATGGGTGGAATTCTTTCCTACAATTGTTTCAAAGGCAAGAACACTTGAAGTA
ATATCATGTGGCATGATGGGCAGTCGGAGTAGTACATTACAATTGATGTATGAAGAACAG
CAAGTGCTTTCGCCATTAGTCCCAACACGACAATTCTACTTCCTACGGTTTTGCCAGCAG
ATTGAGACGGGCTCGTGGGCAATTGTTGATGTTTCCTATGATATTACTCAAGAAAATATG
TACCCTCCCTCTTCTTGTAAGGTTCATAAGCTCCCATCTGGATGTTTGATACAAGACATG
CCCAATGGTTATTCCAAGGTAACTTGGTTGGAACATGTTGAAGTGGAAGAGAAAGGTTCA
ATTCATAGGCTATATAGAGATCTTATATATAGTGGTATGGCATTTGGAGCAGAGAGATGG
CTTGGTTCTCTTCAGAGATTGTGTGAGAGATATGCTTGTTTAATGGTTAGCGGCAACTCT
TCTCGTGAACTTGGAGGAGTGATTCCGTCACCAGAAGGGAAGAAAAGCATGATGAAAGTG
GCTCAAAGAATGGTGAGCAGTTTCTGTGCCAGCATAAATCCGTCCAATGGACACCAGTGG
AACAACATTTCTACATTGGATGAATTTGAAGTTAGAGCCACCCTTCAAAAGTGCACAGAT
CCTGGCCAGCCCAATGGTGTAGTCATCAGTGCAGCTTCCACTATTTGGCTCCCAGTTCCT
CCACAACATGTTTTCAATTTCCTCAGGGACGAAAGGACTCGACCTCAGTGGGATGTTCTT
TCCAACCAAAATCCAGTACAAGAGGTAGCTCACATTGCAAATGGCTCTCACCCAGGGAAT
TCTATTTCTGTGCTCAGGGCCTATAACACTAGCCAGAATAACATGTTGATACTTCAAGAA
AGTTGCATAGACTCATCAGGTTCACTAGTAGTCTACAGTCCTGTTGATTTACAATCCATC
AACATTGCAATGAGTGGTGAAGACACCACCTACATCCCTTTGCTCCCCTCAGGTTTCACA
ATATCACAAGATGGACGAGGGTCCAACGAGGCATTATCGATGAATAATGGTAGTACCATG
GGAGGAGCAGGTGCAGGGGGGTCACTAGTGACAGTAGTGTTTCAGATATTGGTAAGCAGT
TTATCATCATCAGCCAAAATGAGCCCAGAATCAGTAAACACAGTTAATAACCTTATAGGC
AACACTATCCACCAAATTAAAACTGCCTTGAATTGCTCCACTTCCTGA