Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069238
CDS Infomation

pacid=37450515 polypeptide=PGSC0003DMP400046753 locus=PGSC0003DMG400026934 ID=PGSC0003DMT400069238.v4.03 annot-version=v4.03
Sequence

ATGGATTTCCACAGCCTCGCAAGGAGAGAATTGCAAGCTCTTTGCAAGAAGAACAAGATC
CCAGCTAACTTGACCAATGTTGCCATGGCTGATGCTCTTCAATCTCTTGAATTTGTTGAT
GGTATTGAAGAGGTCTTGAAAACATGTGAATCTGATGTTGCCAACCCATCCATGGAATCC
CCTGGAAAGTCAGAAGCATTAGCAAGTGTACCTCGGACTGGTCGCCGAACTACACAACGA
AAGACAATCAAACATGACTCAGAAACTTTGCAGACCACGACAAGGAGTCACTGCAGAACA
AGAGGAACAGTGGTAAGAGACGTTGATGAAGCCAAAAATGATATGCTGGAGACTCCTGCA
TTGCCAACTACCAGAAGGAGGGCTGCAACAACTTCAGTTCGTGCTAAGCTGGAATCTGCA
ATGAAGGAATGTGAACCAAAAGTGGAAATTGTGGATCCGGTTGAGGAAGAAAAGAAAGAT
GTTCCAAAGACACCAGCAGCTGCTCTCACTAGCCAAAGAAAGGAAGTGAAGGCAAAGAGT
TCAGTTAGGCAAGTGTACAGCACTCGTCGATCAGTGAGGTTAGCTGGGAAACCTATGCAG
GAATCAAGCACTCAAGAGGATGAAAAGTCAGGAACCCTTACGTTTGATGCAGTTTCTGAA
GAAACTGATGAAAGTTTGGAGGTGAACTCTGACCTGCAATCTGCTCACAAGTCTGAAGAA
TTAGACAAAAATGGTATTGATTTGAAATCATCCAAGAGTTTGGACATGAAGAACAAATCA
GATACCGTGTCAGTTCAAGATTCAAATACCTTGGTACAAAATAAAATAGACATGGAAGAT
GGTGTTCAACAAGACAGTGCTAATGATCTGGAAGTTGTTGTCTTAGATACAAAAGCAAAA
GAGGGCTCAGAGGAAGTAGCACTTGGCTGCAATAATGATGGATCTGGAGAAGAACCCATG
GAAGAATCTGAAATTGTTGCTGAGGCTAAAGAAGAAATAGATTTTCAGAACAAAAGCCAG
AACTTGGGTGATGATCCCAAGAGTAATTCAGATATCACAAAGCAGCCTAATAGACAGGAT
GAGCCCCATGGTGATACATCTGATTTTATGGCAGAAAATGATGGGGAGGAAGAAGGTCAT
TTTGATTCTGATGTTGCAGGAAAACAAGAGTTGATTGGAGAACAACCTGTAGCTGTAAGT
GTCAATCCAGACACTAACATAGATTTTCACGAGGTGGATTTGTTTGAGCAATCCAATGGT
GAGGAAGAGGCTAAGATGCGTGCAAGTCAGCAGAAGTGTGTGACTAACATGCAAGCTAAC
ATAGATTTTCTTGAGGTGAATTTGTTCGAGCAATTCAATGGTGAGGTCCAGGCTAAGGTG
AGTGGAAGTCAGCAGAAGTGTCTGACTAACATGGAAGATGCAGGAGAAGTTGCTGGAGAA
GAAGAACCCATGGAAGAATATGATGTTGATTGTACTGAGGCTACCATGGATGCACCAGCT
GATGCTCTGGAAGTTGCTGGAGAAGAAGAACAACCCATGGAAGAATTTGATGTTGATTGT
TCTGAGGCTAACGTGGTTGCACCAGCTGATGCTCTGGAAGTTGCTGGAGATGATGAATCC
ATGGATGACTCAGAAATTGATTATGCTGAGGCTACTGTGGAGAGTGCAGCTCACAGTCTT
CCACCCTTGCCTCTCATTTCTAATGCTGCCCCAGAACCAGTCATCACTTTGGCACTGGAT
ACTATGCAAAATCCTTCTGCCTTGACAAGCACAAATTCAGAACTCATCACTCAGACACCA
GTTGAGAATTCATCAGCAGTGACAAGCATAGGACAGATGCTTGTTACAGATAACAAGGAA
AACTTGGTTTGTACGAAAGAAAACAAAGGCACTGCTGGCAATAACTTGCAAAATTTAAGC
TTGAGGAAGCTTACAAAAATGTTGAAAGATTTAAAGATCTCAAAAGATCCTAGTGGAAAG
GAGGCAGTAAACTCAAGATCAGCCTTGCAAAAAGTTCCAGAAAACCGTTTGACGAGTGAA
AACGAAAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046753
PEP Infomation

pacid=37450515 transcript=PGSC0003DMT400069238 locus=PGSC0003DMG400026934 ID=PGSC0003DMT400069238.v4.03 annot-version=v4.03
Sequence

MDFHSLARRELQALCKKNKIPANLTNVAMADALQSLEFVDGIEEVLKTCESDVANPSMES
PGKSEALASVPRTGRRTTQRKTIKHDSETLQTTTRSHCRTRGTVVRDVDEAKNDMLETPA
LPTTRRRAATTSVRAKLESAMKECEPKVEIVDPVEEEKKDVPKTPAAALTSQRKEVKAKS
SVRQVYSTRRSVRLAGKPMQESSTQEDEKSGTLTFDAVSEETDESLEVNSDLQSAHKSEE
LDKNGIDLKSSKSLDMKNKSDTVSVQDSNTLVQNKIDMEDGVQQDSANDLEVVVLDTKAK
EGSEEVALGCNNDGSGEEPMEESEIVAEAKEEIDFQNKSQNLGDDPKSNSDITKQPNRQD
EPHGDTSDFMAENDGEEEGHFDSDVAGKQELIGEQPVAVSVNPDTNIDFHEVDLFEQSNG
EEEAKMRASQQKCVTNMQANIDFLEVNLFEQFNGEVQAKVSGSQQKCLTNMEDAGEVAGE
EEPMEEYDVDCTEATMDAPADALEVAGEEEQPMEEFDVDCSEANVVAPADALEVAGDDES
MDDSEIDYAEATVESAAHSLPPLPLISNAAPEPVITLALDTMQNPSALTSTNSELITQTP
VENSSAVTSIGQMLVTDNKENLVCTKENKGTAGNNLQNLSLRKLTKMLKDLKISKDPSGK
EAVNSRSALQKVPENRLTSENEN*

Transcript Sequence

Transcript ID

PGSC0003DMT400069238
Transcript Infomation

pacid=37450515 locus=PGSC0003DMG400026934 ID=PGSC0003DMT400069238.v4.03 annot-version=v4.03
Sequence

ATGGATTTCCACAGCCTCGCAAGGAGAGAATTGCAAGCTCTTTGCAAGAAGAACAAGATC
CCAGCTAACTTGACCAATGTTGCCATGGCTGATGCTCTTCAATCTCTTGAATTTGTTGAT
GGTATTGAAGAGGTCTTGAAAACATGTGAATCTGATGTTGCCAACCCATCCATGGAATCC
CCTGGAAAGTCAGAAGCATTAGCAAGTGTACCTCGGACTGGTCGCCGAACTACACAACGA
AAGACAATCAAACATGACTCAGAAACTTTGCAGACCACGACAAGGAGTCACTGCAGAACA
AGAGGAACAGTGGTAAGAGACGTTGATGAAGCCAAAAATGATATGCTGGAGACTCCTGCA
TTGCCAACTACCAGAAGGAGGGCTGCAACAACTTCAGTTCGTGCTAAGCTGGAATCTGCA
ATGAAGGAATGTGAACCAAAAGTGGAAATTGTGGATCCGGTTGAGGAAGAAAAGAAAGAT
GTTCCAAAGACACCAGCAGCTGCTCTCACTAGCCAAAGAAAGGAAGTGAAGGCAAAGAGT
TCAGTTAGGCAAGTGTACAGCACTCGTCGATCAGTGAGGTTAGCTGGGAAACCTATGCAG
GAATCAAGCACTCAAGAGGATGAAAAGTCAGGAACCCTTACGTTTGATGCAGTTTCTGAA
GAAACTGATGAAAGTTTGGAGGTGAACTCTGACCTGCAATCTGCTCACAAGTCTGAAGAA
TTAGACAAAAATGGTATTGATTTGAAATCATCCAAGAGTTTGGACATGAAGAACAAATCA
GATACCGTGTCAGTTCAAGATTCAAATACCTTGGTACAAAATAAAATAGACATGGAAGAT
GGTGTTCAACAAGACAGTGCTAATGATCTGGAAGTTGTTGTCTTAGATACAAAAGCAAAA
GAGGGCTCAGAGGAAGTAGCACTTGGCTGCAATAATGATGGATCTGGAGAAGAACCCATG
GAAGAATCTGAAATTGTTGCTGAGGCTAAAGAAGAAATAGATTTTCAGAACAAAAGCCAG
AACTTGGGTGATGATCCCAAGAGTAATTCAGATATCACAAAGCAGCCTAATAGACAGGAT
GAGCCCCATGGTGATACATCTGATTTTATGGCAGAAAATGATGGGGAGGAAGAAGGTCAT
TTTGATTCTGATGTTGCAGGAAAACAAGAGTTGATTGGAGAACAACCTGTAGCTGTAAGT
GTCAATCCAGACACTAACATAGATTTTCACGAGGTGGATTTGTTTGAGCAATCCAATGGT
GAGGAAGAGGCTAAGATGCGTGCAAGTCAGCAGAAGTGTGTGACTAACATGCAAGCTAAC
ATAGATTTTCTTGAGGTGAATTTGTTCGAGCAATTCAATGGTGAGGTCCAGGCTAAGGTG
AGTGGAAGTCAGCAGAAGTGTCTGACTAACATGGAAGATGCAGGAGAAGTTGCTGGAGAA
GAAGAACCCATGGAAGAATATGATGTTGATTGTACTGAGGCTACCATGGATGCACCAGCT
GATGCTCTGGAAGTTGCTGGAGAAGAAGAACAACCCATGGAAGAATTTGATGTTGATTGT
TCTGAGGCTAACGTGGTTGCACCAGCTGATGCTCTGGAAGTTGCTGGAGATGATGAATCC
ATGGATGACTCAGAAATTGATTATGCTGAGGCTACTGTGGAGAGTGCAGCTCACAGTCTT
CCACCCTTGCCTCTCATTTCTAATGCTGCCCCAGAACCAGTCATCACTTTGGCACTGGAT
ACTATGCAAAATCCTTCTGCCTTGACAAGCACAAATTCAGAACTCATCACTCAGACACCA
GTTGAGAATTCATCAGCAGTGACAAGCATAGGACAGATGCTTGTTACAGATAACAAGGAA
AACTTGGTTTGTACGAAAGAAAACAAAGGCACTGCTGGCAATAACTTGCAAAATTTAAGC
TTGAGGAAGCTTACAAAAATGTTGAAAGATTTAAAGATCTCAAAAGATCCTAGTGGAAAG
GAGGCAGTAAACTCAAGATCAGCCTTGCAAAAAGTTCCAGAAAACCGTTTGACGAGTGAA
AACGAAAATTGA