Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069226
CDS Infomation

pacid=37452774 polypeptide=PGSC0003DMP400046746 locus=PGSC0003DMG400026927 ID=PGSC0003DMT400069226.v4.03 annot-version=v4.03
Sequence

ATGGATTTTCAGAGTAACCCACAGGGTGAATATGGAAGATTTGAGCAAATACTTGCTCAA
TATCTTCTAAAAAGCTTGCATATTATTTTGAACTTGAGGGTTCCTTCGATAAGATCATAT
GGTGGGTTTGAAGAAGTGAAGAGGAGTGACAAGTGGTTTAATATGGTGTTGGGAGATCGT
CCTGCGGTTTTTGAAAACTTGAATCTGTTGCACGGGGAGCCGATGATAATAGATATAATA
CTCGTTCAAGATAAAGATTGTACTTCATTGAAGCACAATTCAGGTAAAGCATTTGCAGGG
GCATATACAGAAACCATTATAGAGAGGTGGGTCGTGCAATGTGAGAATCGGAGGTCAATG
GTTCCTCACATGGGTGATTCCTCTTACAAGAAAATGTACAAGAAGTCTATTATACTACTC
CGTTCCGTTTATTCAATGTTGAAGCTCCTGCCTGCATTCAAGGCCTTCAAGAAACTATCT
TCGTCAAGTCAGAGTTGTTATTTTGATATTAATTTTAAGGTATCTTCATTTAGTGAGCCA
TTCTCAAGGGCAGAGGAGGAGATGATGAAGCAATTTACTTTTACTTCAGTTGATGCCCAG
CAAGGCCGTCTTTCCTTATCTGTGACATATCGTGAAAATCTGGTGGACTTCAACCTGGAG
AGTTCTGCATCCTTTCCGCCTGAGATCATTACAGATTATGTTGGTAGTCCACTCACTGAT
CCTCTGAGGTCATTCCCTTTGAACTCAACGGATAAGGGTGTTCATAATACTTCGTTTCCA
TTGAGAAGGACACAGTCCTCTTGTTCAGCACCTGTTCAGCGCCCACAGAGTTGGACAAGT
GGTCTCTTCAGGGCACCTTCTTTACCTCAGCCATATGTAGGATCTCCACCTTTGTACCAT
GCACCATATGAGTTTTCAACTTCAGTCAGTGATGTATATGGACAGAGGATTCCACCTAAC
TACAAATATTCGACTCACCAGAAAACAACTAGTTTTGATGATGACCAGCTTTCCCCTCCA
TTTTCATTATCACCATCTCCACCCACATATCTCTCAGGTGCAAATCTTGTGCAGACTCGT
TTGCATTCAGAAACTGGTCCTGTCAGTATCCCTCATCCATTGATAGGCAGAACTTCCAGA
CATATATCTCCTAATTTGTCTGATCCAAACAGGCATTATCTCCCACCTATGTCACCTAGA
TGCACAAAGCATGATTCTTCATCCCATGAATCCCCTTTTGGAATCAGGCCATTAAGGAAA
ATAGATTTGCTAAGGGTTCCAGAGTCAGATACCGGGACTACTAATCCTGGACAAAAGGTG
TCTACAGATGCTAGAGACGATTCAGGGCGGTTCTCAGGTGTGCTCTCTTCAAGTGATTCA
CCACGTGTTGGAGTTTCTAGAAGTTCTAGCAGCAGATTATCTTTTCAGGATGACTTGGAT
GACTGTGATTTTTCCTGTCCTTTTATAGTTGATGATGTTGATACTTCTGATTCCCGAGCC
AGAGAGAACCTTGATCCCAGAAAGTGTTCAGAAGCCTCGTGTAAAGTATCTGCAACAACC
AGAAAATCTCAAGATGCTGCTGTAGGTGCCCTTGTTCACATGCTGAGAACTGCTCCTCCT
TTGCGTCAAGATTCTACTTGTTATACTGCACATTCTATAAAGGGAGAAGTAGAGGGAGAA
ACTGGCACTGCATCTCTGTTCTATGTTCCTAGGAAGGCATCTGATGCATTGGAGGAGCTT
AAAGCTTACACACAATTGAAAGACATCTTACTTCCCAAGAGCATGGCCCGCTCAAGCAGT
GAGGGTGGGAACTTTGCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046746
PEP Infomation

pacid=37452774 transcript=PGSC0003DMT400069226 locus=PGSC0003DMG400026927 ID=PGSC0003DMT400069226.v4.03 annot-version=v4.03
Sequence

MDFQSNPQGEYGRFEQILAQYLLKSLHIILNLRVPSIRSYGGFEEVKRSDKWFNMVLGDR
PAVFENLNLLHGEPMIIDIILVQDKDCTSLKHNSGKAFAGAYTETIIERWVVQCENRRSM
VPHMGDSSYKKMYKKSIILLRSVYSMLKLLPAFKAFKKLSSSSQSCYFDINFKVSSFSEP
FSRAEEEMMKQFTFTSVDAQQGRLSLSVTYRENLVDFNLESSASFPPEIITDYVGSPLTD
PLRSFPLNSTDKGVHNTSFPLRRTQSSCSAPVQRPQSWTSGLFRAPSLPQPYVGSPPLYH
APYEFSTSVSDVYGQRIPPNYKYSTHQKTTSFDDDQLSPPFSLSPSPPTYLSGANLVQTR
LHSETGPVSIPHPLIGRTSRHISPNLSDPNRHYLPPMSPRCTKHDSSSHESPFGIRPLRK
IDLLRVPESDTGTTNPGQKVSTDARDDSGRFSGVLSSSDSPRVGVSRSSSSRLSFQDDLD
DCDFSCPFIVDDVDTSDSRARENLDPRKCSEASCKVSATTRKSQDAAVGALVHMLRTAPP
LRQDSTCYTAHSIKGEVEGETGTASLFYVPRKASDALEELKAYTQLKDILLPKSMARSSS
EGGNFA*

Transcript Sequence

Transcript ID

PGSC0003DMT400069226
Transcript Infomation

pacid=37452774 locus=PGSC0003DMG400026927 ID=PGSC0003DMT400069226.v4.03 annot-version=v4.03
Sequence

ATGGATTTTCAGAGTAACCCACAGGGTGAATATGGAAGATTTGAGCAAATACTTGCTCAA
TATCTTCTAAAAAGCTTGCATATTATTTTGAACTTGAGGGTTCCTTCGATAAGATCATAT
GGTGGGTTTGAAGAAGTGAAGAGGAGTGACAAGTGGTTTAATATGGTGTTGGGAGATCGT
CCTGCGGTTTTTGAAAACTTGAATCTGTTGCACGGGGAGCCGATGATAATAGATATAATA
CTCGTTCAAGATAAAGATTGTACTTCATTGAAGCACAATTCAGGTAAAGCATTTGCAGGG
GCATATACAGAAACCATTATAGAGAGGTGGGTCGTGCAATGTGAGAATCGGAGGTCAATG
GTTCCTCACATGGGTGATTCCTCTTACAAGAAAATGTACAAGAAGTCTATTATACTACTC
CGTTCCGTTTATTCAATGTTGAAGCTCCTGCCTGCATTCAAGGCCTTCAAGAAACTATCT
TCGTCAAGTCAGAGTTGTTATTTTGATATTAATTTTAAGGTATCTTCATTTAGTGAGCCA
TTCTCAAGGGCAGAGGAGGAGATGATGAAGCAATTTACTTTTACTTCAGTTGATGCCCAG
CAAGGCCGTCTTTCCTTATCTGTGACATATCGTGAAAATCTGGTGGACTTCAACCTGGAG
AGTTCTGCATCCTTTCCGCCTGAGATCATTACAGATTATGTTGGTAGTCCACTCACTGAT
CCTCTGAGGTCATTCCCTTTGAACTCAACGGATAAGGGTGTTCATAATACTTCGTTTCCA
TTGAGAAGGACACAGTCCTCTTGTTCAGCACCTGTTCAGCGCCCACAGAGTTGGACAAGT
GGTCTCTTCAGGGCACCTTCTTTACCTCAGCCATATGTAGGATCTCCACCTTTGTACCAT
GCACCATATGAGTTTTCAACTTCAGTCAGTGATGTATATGGACAGAGGATTCCACCTAAC
TACAAATATTCGACTCACCAGAAAACAACTAGTTTTGATGATGACCAGCTTTCCCCTCCA
TTTTCATTATCACCATCTCCACCCACATATCTCTCAGGTGCAAATCTTGTGCAGACTCGT
TTGCATTCAGAAACTGGTCCTGTCAGTATCCCTCATCCATTGATAGGCAGAACTTCCAGA
CATATATCTCCTAATTTGTCTGATCCAAACAGGCATTATCTCCCACCTATGTCACCTAGA
TGCACAAAGCATGATTCTTCATCCCATGAATCCCCTTTTGGAATCAGGCCATTAAGGAAA
ATAGATTTGCTAAGGGTTCCAGAGTCAGATACCGGGACTACTAATCCTGGACAAAAGGTG
TCTACAGATGCTAGAGACGATTCAGGGCGGTTCTCAGGTGTGCTCTCTTCAAGTGATTCA
CCACGTGTTGGAGTTTCTAGAAGTTCTAGCAGCAGATTATCTTTTCAGGATGACTTGGAT
GACTGTGATTTTTCCTGTCCTTTTATAGTTGATGATGTTGATACTTCTGATTCCCGAGCC
AGAGAGAACCTTGATCCCAGAAAGTGTTCAGAAGCCTCGTGTAAAGTATCTGCAACAACC
AGAAAATCTCAAGATGCTGCTGTAGGTGCCCTTGTTCACATGCTGAGAACTGCTCCTCCT
TTGCGTCAAGATTCTACTTGTTATACTGCACATTCTATAAAGGGAGAAGTAGAGGGAGAA
ACTGGCACTGCATCTCTGTTCTATGTTCCTAGGAAGGCATCTGATGCATTGGAGGAGCTT
AAAGCTTACACACAATTGAAAGACATCTTACTTCCCAAGAGCATGGCCCGCTCAAGCAGT
GAGGGTGGGAACTTTGCGTGA