Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069211
CDS Infomation

pacid=37453225 polypeptide=PGSC0003DMP400046734 locus=PGSC0003DMG400026920 ID=PGSC0003DMT400069211.v4.03 annot-version=v4.03
Sequence

ATGGAATCTCAGCCAGCATCTCCAGGATTCGGAGCGTCATTGCAACTGAAGGACTGCATA
GAAGAGCTGCTGAGATTCACACTTGTTTCCTCCATTGACGGCACTCTTGAAATTGACTTA
GGTCTCTCTAAAGACTATTGCTCCACCCTCTTACAAGAAGATCCTTCCGACCCCTTTTTC
AATCCCACTGGTCTTTCTGAAGGAGTTCCTTTATATCCTTTATACAAGCGCCTTGCAGCA
TCCTTATATGAGGCTATTTCTTCTGAAGCCTTGCCAAGGACAGAAAACAAACTTGCAGTA
ATGCAAGAAACTAGTTCTTTGAAGCAAAAGGAAGAAGAGTGGGCTAGTTTAATTAGGGAA
AAAGGTTCACATTTGCTCAATGTGCTTAAATCTGTGGACTTTGAACTCCATGTTCAGGAG
CCTTACTTCTCTCTACTTAGAAACGGACAGAAAACAGTTGAAGGAAGGTGTGCTGTTGGA
CACTATAATAAAATTGAACCAGGTTCGTCCATCCTCATCAACAAATGTTTAGTTCTTCAA
GTTCAGGATGTCCATCATTATCATTCATTCCATGAAATGTTAGAAGCAGAAAGTCTTAAA
GAAGTTCTTCCTGGAGTGGATACCACTGAAGAAGGTGTCCAAGTTTACCGGAGATTTTAC
TCAGAAGAGAAAGAAAGGTCAAATGGTGTTCTTGCTATCAGTGTTAAGAAGCTGGTTTCT
CAGCCTTCCATCAATTTGAGCTCCATGCTATCTGAACTGAGCTATGCTGGTGTTCAGAGG
CTTTTAGGATTCGTATGTACAGCTGGAACAGTTTCTGAGGCACTTCCACCGCCAACATCT
TCTCTAATCTCATCATTTCTATTGCCACATAATCCAAATACTAAAGGTTGTACATTGACT
GATGGAGCGAGGGCATTGTCAAAGCACGTTAACAGGAGCAGTGACAGATACTGGGGTAGT
TTTTCTGGAAGTGATTCTGATAAAAATAGGATTGCCCTGGATGTCATCAGGAACTTAATA
ACGCGTTCCTGCTGGATGAATGTGCATATTGTTCCACCACATGGTGTTGTTTTTGAGATA
AGAGTTGTTAATGGTTACGGTGCACGGTGGTCTAAAGATGGAAGTAAGTTTATTGGTTTC
CTTGAGCCCTATATGGAGGATGGCCATTCAAAGGGATGGAGGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046734
PEP Infomation

pacid=37453225 transcript=PGSC0003DMT400069211 locus=PGSC0003DMG400026920 ID=PGSC0003DMT400069211.v4.03 annot-version=v4.03
Sequence

MESQPASPGFGASLQLKDCIEELLRFTLVSSIDGTLEIDLGLSKDYCSTLLQEDPSDPFF
NPTGLSEGVPLYPLYKRLAASLYEAISSEALPRTENKLAVMQETSSLKQKEEEWASLIRE
KGSHLLNVLKSVDFELHVQEPYFSLLRNGQKTVEGRCAVGHYNKIEPGSSILINKCLVLQ
VQDVHHYHSFHEMLEAESLKEVLPGVDTTEEGVQVYRRFYSEEKERSNGVLAISVKKLVS
QPSINLSSMLSELSYAGVQRLLGFVCTAGTVSEALPPPTSSLISSFLLPHNPNTKGCTLT
DGARALSKHVNRSSDRYWGSFSGSDSDKNRIALDVIRNLITRSCWMNVHIVPPHGVVFEI
RVVNGYGARWSKDGSKFIGFLEPYMEDGHSKGWRH*

Transcript Sequence

Transcript ID

PGSC0003DMT400069211
Transcript Infomation

pacid=37453225 locus=PGSC0003DMG400026920 ID=PGSC0003DMT400069211.v4.03 annot-version=v4.03
Sequence

ATGGAATCTCAGCCAGCATCTCCAGGATTCGGAGCGTCATTGCAACTGAAGGACTGCATA
GAAGAGCTGCTGAGATTCACACTTGTTTCCTCCATTGACGGCACTCTTGAAATTGACTTA
GGTCTCTCTAAAGACTATTGCTCCACCCTCTTACAAGAAGATCCTTCCGACCCCTTTTTC
AATCCCACTGGTCTTTCTGAAGGAGTTCCTTTATATCCTTTATACAAGCGCCTTGCAGCA
TCCTTATATGAGGCTATTTCTTCTGAAGCCTTGCCAAGGACAGAAAACAAACTTGCAGTA
ATGCAAGAAACTAGTTCTTTGAAGCAAAAGGAAGAAGAGTGGGCTAGTTTAATTAGGGAA
AAAGGTTCACATTTGCTCAATGTGCTTAAATCTGTGGACTTTGAACTCCATGTTCAGGAG
CCTTACTTCTCTCTACTTAGAAACGGACAGAAAACAGTTGAAGGAAGGTGTGCTGTTGGA
CACTATAATAAAATTGAACCAGGTTCGTCCATCCTCATCAACAAATGTTTAGTTCTTCAA
GTTCAGGATGTCCATCATTATCATTCATTCCATGAAATGTTAGAAGCAGAAAGTCTTAAA
GAAGTTCTTCCTGGAGTGGATACCACTGAAGAAGGTGTCCAAGTTTACCGGAGATTTTAC
TCAGAAGAGAAAGAAAGGTCAAATGGTGTTCTTGCTATCAGTGTTAAGAAGCTGGTTTCT
CAGCCTTCCATCAATTTGAGCTCCATGCTATCTGAACTGAGCTATGCTGGTGTTCAGAGG
CTTTTAGGATTCGTATGTACAGCTGGAACAGTTTCTGAGGCACTTCCACCGCCAACATCT
TCTCTAATCTCATCATTTCTATTGCCACATAATCCAAATACTAAAGGTTGTACATTGACT
GATGGAGCGAGGGCATTGTCAAAGCACGTTAACAGGAGCAGTGACAGATACTGGGGTAGT
TTTTCTGGAAGTGATTCTGATAAAAATAGGATTGCCCTGGATGTCATCAGGAACTTAATA
ACGCGTTCCTGCTGGATGAATGTGCATATTGTTCCACCACATGGTGTTGTTTTTGAGATA
AGAGTTGTTAATGGTTACGGTGCACGGTGGTCTAAAGATGGAAGTAAGTTTATTGGTTTC
CTTGAGCCCTATATGGAGGATGGCCATTCAAAGGGATGGAGGCACTGA