Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400069107
CDS Infomation

pacid=37457444 polypeptide=PGSC0003DMP400046667 locus=PGSC0003DMG400026880 ID=PGSC0003DMT400069107.v4.03 annot-version=v4.03
Sequence

ATGGTTTTGTTGATTCAATCGAATATTGCTCGTCGATCGGCGATACAAATTGCCTCTGCT
CTCCGTCAGTTCCACCGCACGATTGATCTTGTTTGTTGTGAGGGAGTGAGAGCGAGAGTG
AGATTTTTGTCGACCATTGATGATGCTGCCGAAAAACAGAGTCATGAGAAGGTGTCGAAT
AAACCATCAATATGCACCGCCGACGAGCTTCATTATGTCTCCCTTAGTACTTGTGATTGG
AGACTTGCTCTCTGGCGCTACCTTCCTCCTCCGCAGGCTCCAAGGAGAAATCACCCGCTT
CTTCTCTTGTCTGGCATAGGGACTAATGCTATTGGATATGATCTTTCGCCTCAGTCATCA
TTTGCTCGGTACATGTGTAATCAAGGATTTGATACGTGGATTCTTGAAGTCCGTGGAACT
GGGTTGAGCGTGCGGGAACCAGATCCTAAAAACATTGAGAAATCTGCACACACAGCATCT
AATGAGATGGAAAATGCTAATGACAGAGGTCTTTCTGCAGCACAGCAGTCAACAAAGGTC
CAGGGTGCCTCAGAAAAGGACCATGCTGCCTTGGTCCATGAAGAACCCACTGTGGTTTCA
ACAATATGGAATGAGTCAAGACTGGTGACCAAACTTACAGAAACTTTTATACGCTTGTCG
GAGAGAGTCTCTGGCTTTGTCAGTGGACATTGGTCGAAGATTGTCTTTCCTAAACTTGTT
CGTCGAATATTAAAACGATTGGAGGATTCTTTTCCTTACAAACGGGTCAACAGAATAAGG
AAGAAATTGTTAAGTCTGCTAGAGATGAAGGAGAACTCAGCTGTCATTGATAGCCAAGTT
GGGGCACTGAGCAAGAAGCTAGTAAATATCTTTGAAGAAGGTCATCGTTCTGTTTCATCC
CCATTATTTGATCTACAACAACGGTTGACAACTACAGTAGGAGATTTTCAGGAACAGCTT
GACTTAATCCTCAAGTATGATTGGGACTTTGATACTTACCTGGAAGAGGATGTCCCTGCT
GCGATGGAATATATAAAGGCCCAAACTAGACCAAAGGACGGCAAACTACTCGCAATTGGA
CATTCTATGGGAGGAATATTACTGTATGCCAGGCTATCACGGTGTGGTTTGGAAGGAAGA
AAGCCTGGATTAGCAGCTATTGTTACTTTGGCTTCATCACTTGATTACACATCATCAAAG
TCCGCACTCAAACTGCTTGTACCACTTGCTGATCCTGCTCAGGTTCTCAATGTTCCTGTC
ATTCCTCTAGGGACATTAGTGGCTGCTGCTTATCCTCTAACATCTCGCGCTCCTTATGCC
TTGGCTTGGCTTAATGAAATGATATCTGCCACAGACATGATGCATCCAGACCAGATGAAA
AAACTTGTAGGGAGCAGCTTTTGTAATATTCCTGCTAAGCTTCTTTTGCAGATGACTACG
GCTTTTCAAGAGCGAGGGCTCCGTGATAGAAGTGGTAAAATCTTCTACAAGGATCACCTT
CACAAAAGTAGGGTACCTGTCTTAGCTCTTGCAGGAGATCTAGACCAAATCTGTCCCCCA
GAAGCTGTATATGAAACAGTGAAGCTTATCCCTGAGAACTTAGTGAAGTACAAAGTATTT
GGCGATGCTGATGGTCCACATTATGCTCATTATGACTTGGTGTGTGGACGCATGGCTGCA
GAGCGATTGTATCCTCGCATAGTCAAATTTTTAAGCCGATATGATCGGACCAGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046667
PEP Infomation

pacid=37457444 transcript=PGSC0003DMT400069107 locus=PGSC0003DMG400026880 ID=PGSC0003DMT400069107.v4.03 annot-version=v4.03
Sequence

MVLLIQSNIARRSAIQIASALRQFHRTIDLVCCEGVRARVRFLSTIDDAAEKQSHEKVSN
KPSICTADELHYVSLSTCDWRLALWRYLPPPQAPRRNHPLLLLSGIGTNAIGYDLSPQSS
FARYMCNQGFDTWILEVRGTGLSVREPDPKNIEKSAHTASNEMENANDRGLSAAQQSTKV
QGASEKDHAALVHEEPTVVSTIWNESRLVTKLTETFIRLSERVSGFVSGHWSKIVFPKLV
RRILKRLEDSFPYKRVNRIRKKLLSLLEMKENSAVIDSQVGALSKKLVNIFEEGHRSVSS
PLFDLQQRLTTTVGDFQEQLDLILKYDWDFDTYLEEDVPAAMEYIKAQTRPKDGKLLAIG
HSMGGILLYARLSRCGLEGRKPGLAAIVTLASSLDYTSSKSALKLLVPLADPAQVLNVPV
IPLGTLVAAAYPLTSRAPYALAWLNEMISATDMMHPDQMKKLVGSSFCNIPAKLLLQMTT
AFQERGLRDRSGKIFYKDHLHKSRVPVLALAGDLDQICPPEAVYETVKLIPENLVKYKVF
GDADGPHYAHYDLVCGRMAAERLYPRIVKFLSRYDRTS*

Transcript Sequence

Transcript ID

PGSC0003DMT400069107
Transcript Infomation

pacid=37457444 locus=PGSC0003DMG400026880 ID=PGSC0003DMT400069107.v4.03 annot-version=v4.03
Sequence

ATGGTTTTGTTGATTCAATCGAATATTGCTCGTCGATCGGCGATACAAATTGCCTCTGCT
CTCCGTCAGTTCCACCGCACGATTGATCTTGTTTGTTGTGAGGGAGTGAGAGCGAGAGTG
AGATTTTTGTCGACCATTGATGATGCTGCCGAAAAACAGAGTCATGAGAAGGTGTCGAAT
AAACCATCAATATGCACCGCCGACGAGCTTCATTATGTCTCCCTTAGTACTTGTGATTGG
AGACTTGCTCTCTGGCGCTACCTTCCTCCTCCGCAGGCTCCAAGGAGAAATCACCCGCTT
CTTCTCTTGTCTGGCATAGGGACTAATGCTATTGGATATGATCTTTCGCCTCAGTCATCA
TTTGCTCGGTACATGTGTAATCAAGGATTTGATACGTGGATTCTTGAAGTCCGTGGAACT
GGGTTGAGCGTGCGGGAACCAGATCCTAAAAACATTGAGAAATCTGCACACACAGCATCT
AATGAGATGGAAAATGCTAATGACAGAGGTCTTTCTGCAGCACAGCAGTCAACAAAGGTC
CAGGGTGCCTCAGAAAAGGACCATGCTGCCTTGGTCCATGAAGAACCCACTGTGGTTTCA
ACAATATGGAATGAGTCAAGACTGGTGACCAAACTTACAGAAACTTTTATACGCTTGTCG
GAGAGAGTCTCTGGCTTTGTCAGTGGACATTGGTCGAAGATTGTCTTTCCTAAACTTGTT
CGTCGAATATTAAAACGATTGGAGGATTCTTTTCCTTACAAACGGGTCAACAGAATAAGG
AAGAAATTGTTAAGTCTGCTAGAGATGAAGGAGAACTCAGCTGTCATTGATAGCCAAGTT
GGGGCACTGAGCAAGAAGCTAGTAAATATCTTTGAAGAAGGTCATCGTTCTGTTTCATCC
CCATTATTTGATCTACAACAACGGTTGACAACTACAGTAGGAGATTTTCAGGAACAGCTT
GACTTAATCCTCAAGTATGATTGGGACTTTGATACTTACCTGGAAGAGGATGTCCCTGCT
GCGATGGAATATATAAAGGCCCAAACTAGACCAAAGGACGGCAAACTACTCGCAATTGGA
CATTCTATGGGAGGAATATTACTGTATGCCAGGCTATCACGGTGTGGTTTGGAAGGAAGA
AAGCCTGGATTAGCAGCTATTGTTACTTTGGCTTCATCACTTGATTACACATCATCAAAG
TCCGCACTCAAACTGCTTGTACCACTTGCTGATCCTGCTCAGGTTCTCAATGTTCCTGTC
ATTCCTCTAGGGACATTAGTGGCTGCTGCTTATCCTCTAACATCTCGCGCTCCTTATGCC
TTGGCTTGGCTTAATGAAATGATATCTGCCACAGACATGATGCATCCAGACCAGATGAAA
AAACTTGTAGGGAGCAGCTTTTGTAATATTCCTGCTAAGCTTCTTTTGCAGATGACTACG
GCTTTTCAAGAGCGAGGGCTCCGTGATAGAAGTGGTAAAATCTTCTACAAGGATCACCTT
CACAAAAGTAGGGTACCTGTCTTAGCTCTTGCAGGAGATCTAGACCAAATCTGTCCCCCA
GAAGCTGTATATGAAACAGTGAAGCTTATCCCTGAGAACTTAGTGAAGTACAAAGTATTT
GGCGATGCTGATGGTCCACATTATGCTCATTATGACTTGGTGTGTGGACGCATGGCTGCA
GAGCGATTGTATCCTCGCATAGTCAAATTTTTAAGCCGATATGATCGGACCAGCTAG