Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068929
CDS Infomation

pacid=37462109 polypeptide=PGSC0003DMP400046553 locus=PGSC0003DMG400026810 ID=PGSC0003DMT400068929.v4.03 annot-version=v4.03
Sequence

ATGGATAGAGGAGACAGAATAATTGCCTGTTATTCTAATTTGCTGCTTTCTGTCTCTATC
GGGTTCTTGCTTTTTTCAGTTGTCAGTTCACAAATTCCTTTGGGTTCCAAACTAACAGTA
GAAGAGAACAATTATTGGTTCTCATCCAATAAGGACTATGCAATTGGATTCTTGAACTTC
TCCGACCAGTATAGCTTTGGTGTCCGTTTCAATGCAATTTATATACCTAGCAGTGAGCAA
GCAGCCATTTGGACTGCAGGGTGGAATGTTAAAGTTAGTAGCAAAGCATATTTTGAGCTT
TCCCTAACTGGGGAAATGATATTGTTTGATCCAGCAAAGGGAAAAATTGTTTGGCAAAGC
AAAACTGGCAACACATCTGTTGAATCAGCTGTTCTTCTTGATGATGGCAACTTTGTCCTG
TTAAATAGGAATAAGAGTGCTGTTTGGCAGAGTTTTGAAAGTCCATCTGACACAATGCTG
TCTGGCCAGAGTTTATCTGTTGGCCAGTCTCTTCGAGCTTCTAGCAGGGGTTCTTTAACA
AGTTATTACAGTCTTCATATGAATGTTTCTGGTGAGATGCAGCTTAGGTGGGAGACTAGT
ATCATTTACTGGACTGTTGGGGGTCCTAAATCTGCTGTACGAGCCATTCTTGGCTCTGAC
GGAATCCTCCAACTACTTGATCAGCAATCGCAAGCTGTTTGGTCAGTCTATGGTGAGGAC
CACAATGATTCTGATGTGAAGTTTCGGTTCCTCAGACTAGATTCTGATGGTAATCTTCGG
ATATACTCATGGGAAAATAATGCAACATCATGGAGAACAGTTTGGCAAGCTATAATTAAT
CAGTGTGATGTCTTCGCAACCTGTGCTACCAATGGTATTTGCACCTTGAATGCATCTGAC
TCTTATGTTTGTTGGTGTCCATTTAGATCTACAAGAGACTCAAACTCTGAATGTCTAATT
CCATACAAACCAAGTTGTGAATCCGGTTCATCCATGATCCTTCATGAGCATATGTATTTG
TACGGAATATACCCACCAAACAACACAGTTGTGCAAACCAATTTGCAGCAGTGTAGAACT
CTGTGTCAGAAAGATCCATCCTGCCATGCTGCATCCTTTATCAACAATGGCACTCCACAA
TGCCACATGATGAACTCCCGGTATGTTGGTGGTCAATCAGATCCTTCTTTGGGTTCCGTT
ACTTTTGTCAAAACTTGTTCAGACCCAATTGCTGTTTTACCTCCGCCTGTACCTGCTCCG
AGAAAGGTATCACAGAAAATTTGTGTTGCTTGTCTGTTAGAAGTTGCTGCTGCGTCAATC
GTTGTGTTTGTCATGCTTCAATTCAGCATTGGAGTTTACCTTTTTAGGAGAAGGAAACAT
ATGATGCAGAAATCTGCTTTACCCCATATAGTGCCTAATGCTACTGGCTGCATCGTGTTT
TCTTACTCTGAAATCAAAGACCTGACTGATAATTTTAAGCAACAAATTGGGCAGAATGTG
TTCAAAGGTCTACTTCCAGATAATAGGCTTGTTGCAGTTAAAGATCTCAATGCCTCTATT
GATGAAAGGAGGTTCCGGGCTGCAGTTCTAAAAATAGGAAGCATATACCACAAAAATCTT
TTGAGGCTGGATGGTTATTGCTGTGAGTCCGGCCGTAGGTTATTGGTTTATGAGCTTGCC
AAATATGGTTCTGTTGACAAATGTTTAGAAGAACCTAGAATGTGCAAGAGATTGACGTGG
AGAAAAAGAATGGATATATGTTTGTCAGTGGCAAGGGCCATATCTTACTTGCATACAGGA
TGTAGGGAGTTTATTAGTCATGGAAATCTTAAATGTGAAAATGTTGTCTTAGATGATGAA
TTAGAGGCCAAAGTTAGTGAATTTGGACTGAGGACTATTCAAGCTGAGGCTTCCAGTAGC
GGGGGGTTAGCAGAGACAGATGTAAGAGATTTTGGCAAAGTGATGGTGGTATTAATCACT
GGATGCCAAAATGCGGATGAAGCTTGTTATTGGTCCTATGAAAAATGGGTGAAAGCTGAA
AAGGAAATGGCCATGGATCAGCGAATTGTGGTTGGCACCGATTCAGAAGAGTTAGAACGA
GCATTAAGAATTGCATTTTGGTGCTTACAAGGTGATGAACGTATGAGGCCATCAATGGGA
GAGGTAATCAAGGTACTGGAGGGAACTCTGACTGTCGATCCTCCACCACCTCCTTTTGCT
CATAATCAACAGTGGCCACCTGATGATGAATCACCATCTGAATCATATTCAGCACTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046553
PEP Infomation

pacid=37462109 transcript=PGSC0003DMT400068929 locus=PGSC0003DMG400026810 ID=PGSC0003DMT400068929.v4.03 annot-version=v4.03
Sequence

MDRGDRIIACYSNLLLSVSIGFLLFSVVSSQIPLGSKLTVEENNYWFSSNKDYAIGFLNF
SDQYSFGVRFNAIYIPSSEQAAIWTAGWNVKVSSKAYFELSLTGEMILFDPAKGKIVWQS
KTGNTSVESAVLLDDGNFVLLNRNKSAVWQSFESPSDTMLSGQSLSVGQSLRASSRGSLT
SYYSLHMNVSGEMQLRWETSIIYWTVGGPKSAVRAILGSDGILQLLDQQSQAVWSVYGED
HNDSDVKFRFLRLDSDGNLRIYSWENNATSWRTVWQAIINQCDVFATCATNGICTLNASD
SYVCWCPFRSTRDSNSECLIPYKPSCESGSSMILHEHMYLYGIYPPNNTVVQTNLQQCRT
LCQKDPSCHAASFINNGTPQCHMMNSRYVGGQSDPSLGSVTFVKTCSDPIAVLPPPVPAP
RKVSQKICVACLLEVAAASIVVFVMLQFSIGVYLFRRRKHMMQKSALPHIVPNATGCIVF
SYSEIKDLTDNFKQQIGQNVFKGLLPDNRLVAVKDLNASIDERRFRAAVLKIGSIYHKNL
LRLDGYCCESGRRLLVYELAKYGSVDKCLEEPRMCKRLTWRKRMDICLSVARAISYLHTG
CREFISHGNLKCENVVLDDELEAKVSEFGLRTIQAEASSSGGLAETDVRDFGKVMVVLIT
GCQNADEACYWSYEKWVKAEKEMAMDQRIVVGTDSEELERALRIAFWCLQGDERMRPSMG
EVIKVLEGTLTVDPPPPPFAHNQQWPPDDESPSESYSAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400068929
Transcript Infomation

pacid=37462109 locus=PGSC0003DMG400026810 ID=PGSC0003DMT400068929.v4.03 annot-version=v4.03
Sequence

ATGGATAGAGGAGACAGAATAATTGCCTGTTATTCTAATTTGCTGCTTTCTGTCTCTATC
GGGTTCTTGCTTTTTTCAGTTGTCAGTTCACAAATTCCTTTGGGTTCCAAACTAACAGTA
GAAGAGAACAATTATTGGTTCTCATCCAATAAGGACTATGCAATTGGATTCTTGAACTTC
TCCGACCAGTATAGCTTTGGTGTCCGTTTCAATGCAATTTATATACCTAGCAGTGAGCAA
GCAGCCATTTGGACTGCAGGGTGGAATGTTAAAGTTAGTAGCAAAGCATATTTTGAGCTT
TCCCTAACTGGGGAAATGATATTGTTTGATCCAGCAAAGGGAAAAATTGTTTGGCAAAGC
AAAACTGGCAACACATCTGTTGAATCAGCTGTTCTTCTTGATGATGGCAACTTTGTCCTG
TTAAATAGGAATAAGAGTGCTGTTTGGCAGAGTTTTGAAAGTCCATCTGACACAATGCTG
TCTGGCCAGAGTTTATCTGTTGGCCAGTCTCTTCGAGCTTCTAGCAGGGGTTCTTTAACA
AGTTATTACAGTCTTCATATGAATGTTTCTGGTGAGATGCAGCTTAGGTGGGAGACTAGT
ATCATTTACTGGACTGTTGGGGGTCCTAAATCTGCTGTACGAGCCATTCTTGGCTCTGAC
GGAATCCTCCAACTACTTGATCAGCAATCGCAAGCTGTTTGGTCAGTCTATGGTGAGGAC
CACAATGATTCTGATGTGAAGTTTCGGTTCCTCAGACTAGATTCTGATGGTAATCTTCGG
ATATACTCATGGGAAAATAATGCAACATCATGGAGAACAGTTTGGCAAGCTATAATTAAT
CAGTGTGATGTCTTCGCAACCTGTGCTACCAATGGTATTTGCACCTTGAATGCATCTGAC
TCTTATGTTTGTTGGTGTCCATTTAGATCTACAAGAGACTCAAACTCTGAATGTCTAATT
CCATACAAACCAAGTTGTGAATCCGGTTCATCCATGATCCTTCATGAGCATATGTATTTG
TACGGAATATACCCACCAAACAACACAGTTGTGCAAACCAATTTGCAGCAGTGTAGAACT
CTGTGTCAGAAAGATCCATCCTGCCATGCTGCATCCTTTATCAACAATGGCACTCCACAA
TGCCACATGATGAACTCCCGGTATGTTGGTGGTCAATCAGATCCTTCTTTGGGTTCCGTT
ACTTTTGTCAAAACTTGTTCAGACCCAATTGCTGTTTTACCTCCGCCTGTACCTGCTCCG
AGAAAGGTATCACAGAAAATTTGTGTTGCTTGTCTGTTAGAAGTTGCTGCTGCGTCAATC
GTTGTGTTTGTCATGCTTCAATTCAGCATTGGAGTTTACCTTTTTAGGAGAAGGAAACAT
ATGATGCAGAAATCTGCTTTACCCCATATAGTGCCTAATGCTACTGGCTGCATCGTGTTT
TCTTACTCTGAAATCAAAGACCTGACTGATAATTTTAAGCAACAAATTGGGCAGAATGTG
TTCAAAGGTCTACTTCCAGATAATAGGCTTGTTGCAGTTAAAGATCTCAATGCCTCTATT
GATGAAAGGAGGTTCCGGGCTGCAGTTCTAAAAATAGGAAGCATATACCACAAAAATCTT
TTGAGGCTGGATGGTTATTGCTGTGAGTCCGGCCGTAGGTTATTGGTTTATGAGCTTGCC
AAATATGGTTCTGTTGACAAATGTTTAGAAGAACCTAGAATGTGCAAGAGATTGACGTGG
AGAAAAAGAATGGATATATGTTTGTCAGTGGCAAGGGCCATATCTTACTTGCATACAGGA
TGTAGGGAGTTTATTAGTCATGGAAATCTTAAATGTGAAAATGTTGTCTTAGATGATGAA
TTAGAGGCCAAAGTTAGTGAATTTGGACTGAGGACTATTCAAGCTGAGGCTTCCAGTAGC
GGGGGGTTAGCAGAGACAGATGTAAGAGATTTTGGCAAAGTGATGGTGGTATTAATCACT
GGATGCCAAAATGCGGATGAAGCTTGTTATTGGTCCTATGAAAAATGGGTGAAAGCTGAA
AAGGAAATGGCCATGGATCAGCGAATTGTGGTTGGCACCGATTCAGAAGAGTTAGAACGA
GCATTAAGAATTGCATTTTGGTGCTTACAAGGTGATGAACGTATGAGGCCATCAATGGGA
GAGGTAATCAAGGTACTGGAGGGAACTCTGACTGTCGATCCTCCACCACCTCCTTTTGCT
CATAATCAACAGTGGCCACCTGATGATGAATCACCATCTGAATCATATTCAGCACTGTAG