Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068887
CDS Infomation

pacid=37455536 polypeptide=PGSC0003DMP400046535 locus=PGSC0003DMG400026790 ID=PGSC0003DMT400068887.v4.03 annot-version=v4.03
Sequence

ATGGGCAGAAGTAGAGTTTTAGCGATCATTTTCATATTGTTAATCGTTTCAGCAACTTCA
AACGCGAAACTATTCAATTCCAGAAAGTTAGTTGATTTAATACAAAGCACCAATTCATCT
TCTGAACAAATTTCTGCATCAAATACTCCAGTTGAGGGTGAAAAGGAAGTCAATGATAAC
AAGTCTGTAATCGCAAAAGAGAAGCCTGGAAATCCTAAGGGAAACAATGATCCACCAAAA
ACCAGGCCAGAGGAACTAAATTCAACTATAGTCAATGATGGGAGATCACAAACTGAAAAA
CAAAAGCCTAAAGATCCTCAAGTAATCAATGAAGCACCTAAAGATTTGAAGGACCAGAAT
TCAACTGTAGTCAATGATGGAAGTTCAAAAGCTGAAAGTGAACAGCCTAAAGATCCTCAG
GGAAGAAATGGTCCAACAAATATTGATTCAAAAGAGCCAAATACCACTGTAGTGAATGGT
GGGAGCTCTAAAGCTGACAAAGAGAACCCTAAAGATCCTCAGCCTCAGGGAGGCAATCAC
TTACCAAAATTGGATCCGGATGGGTCTAAAAATGATAAAAATGTGACTGTTGAAACCCCT
CCACCTGTTGAGAAGAAGGAGAATGAAGAAAAGAAGAAAATAGATGAAACAATAAACTCG
GAAGTGAACACCAATGAGAGCTGTCAGAAGGCTACAAAAATGTGCAGGATTGGACAAACA
CTGCTTGCATGCATTCAGACACCCCAGAATGGATCTACTGAATTGTTACTTGTGGTGCAA
AATGAAGGGGAAAAAGGAGTCAAAGTAAATATCAATATCCAACCTCCTCTAGATGGTTCT
CCACAACCTCCTATTGAAATACCCAAACATCAAGTGGAAAAGATCGATATTTCATCAATC
TTGGGCAAAGGTGCTGAAATAGTGCTGAATGCTGGAGATGCTAGTTGCAGGCTTCAATTG
GACAGGCATGTTTCTGTGGAGAACATTCTGCAGCAGGTGTCTCTTTATTCTAAGCGTATG
ACCCCCATCTATGGTGCATATTTCCTTTTCCTTGTAGCCCTACTTTTTGGCGGGACATGG
GCTTGCTGCAAGCTAAGGAAGAAGAGACATCAAGATGGTGTTGCGTATCAGGAATTAGAG
ATGGGAATGCCGGAATCTGCCTCAGCTGCAAATGTTGTTGCAGTAGATGGTTGGGATCAG
GATTGGGATGACGATTGGGATGAGGAGAATGCAGTGAAGTCACCAGGTGGACATACCTAT
GGGAACATCTCTGCTAATGGCCTCACGTCTAGGTCTTCTAAAAAGGACGGATGGGAAAAT
GACTGGGATGATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046535
PEP Infomation

pacid=37455536 transcript=PGSC0003DMT400068887 locus=PGSC0003DMG400026790 ID=PGSC0003DMT400068887.v4.03 annot-version=v4.03
Sequence

MGRSRVLAIIFILLIVSATSNAKLFNSRKLVDLIQSTNSSSEQISASNTPVEGEKEVNDN
KSVIAKEKPGNPKGNNDPPKTRPEELNSTIVNDGRSQTEKQKPKDPQVINEAPKDLKDQN
STVVNDGSSKAESEQPKDPQGRNGPTNIDSKEPNTTVVNGGSSKADKENPKDPQPQGGNH
LPKLDPDGSKNDKNVTVETPPPVEKKENEEKKKIDETINSEVNTNESCQKATKMCRIGQT
LLACIQTPQNGSTELLLVVQNEGEKGVKVNINIQPPLDGSPQPPIEIPKHQVEKIDISSI
LGKGAEIVLNAGDASCRLQLDRHVSVENILQQVSLYSKRMTPIYGAYFLFLVALLFGGTW
ACCKLRKKRHQDGVAYQELEMGMPESASAANVVAVDGWDQDWDDDWDEENAVKSPGGHTY
GNISANGLTSRSSKKDGWENDWDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400068887
Transcript Infomation

pacid=37455536 locus=PGSC0003DMG400026790 ID=PGSC0003DMT400068887.v4.03 annot-version=v4.03
Sequence

ATGGGCAGAAGTAGAGTTTTAGCGATCATTTTCATATTGTTAATCGTTTCAGCAACTTCA
AACGCGAAACTATTCAATTCCAGAAAGTTAGTTGATTTAATACAAAGCACCAATTCATCT
TCTGAACAAATTTCTGCATCAAATACTCCAGTTGAGGGTGAAAAGGAAGTCAATGATAAC
AAGTCTGTAATCGCAAAAGAGAAGCCTGGAAATCCTAAGGGAAACAATGATCCACCAAAA
ACCAGGCCAGAGGAACTAAATTCAACTATAGTCAATGATGGGAGATCACAAACTGAAAAA
CAAAAGCCTAAAGATCCTCAAGTAATCAATGAAGCACCTAAAGATTTGAAGGACCAGAAT
TCAACTGTAGTCAATGATGGAAGTTCAAAAGCTGAAAGTGAACAGCCTAAAGATCCTCAG
GGAAGAAATGGTCCAACAAATATTGATTCAAAAGAGCCAAATACCACTGTAGTGAATGGT
GGGAGCTCTAAAGCTGACAAAGAGAACCCTAAAGATCCTCAGCCTCAGGGAGGCAATCAC
TTACCAAAATTGGATCCGGATGGGTCTAAAAATGATAAAAATGTGACTGTTGAAACCCCT
CCACCTGTTGAGAAGAAGGAGAATGAAGAAAAGAAGAAAATAGATGAAACAATAAACTCG
GAAGTGAACACCAATGAGAGCTGTCAGAAGGCTACAAAAATGTGCAGGATTGGACAAACA
CTGCTTGCATGCATTCAGACACCCCAGAATGGATCTACTGAATTGTTACTTGTGGTGCAA
AATGAAGGGGAAAAAGGAGTCAAAGTAAATATCAATATCCAACCTCCTCTAGATGGTTCT
CCACAACCTCCTATTGAAATACCCAAACATCAAGTGGAAAAGATCGATATTTCATCAATC
TTGGGCAAAGGTGCTGAAATAGTGCTGAATGCTGGAGATGCTAGTTGCAGGCTTCAATTG
GACAGGCATGTTTCTGTGGAGAACATTCTGCAGCAGGTGTCTCTTTATTCTAAGCGTATG
ACCCCCATCTATGGTGCATATTTCCTTTTCCTTGTAGCCCTACTTTTTGGCGGGACATGG
GCTTGCTGCAAGCTAAGGAAGAAGAGACATCAAGATGGTGTTGCGTATCAGGAATTAGAG
ATGGGAATGCCGGAATCTGCCTCAGCTGCAAATGTTGTTGCAGTAGATGGTTGGGATCAG
GATTGGGATGACGATTGGGATGAGGAGAATGCAGTGAAGTCACCAGGTGGACATACCTAT
GGGAACATCTCTGCTAATGGCCTCACGTCTAGGTCTTCTAAAAAGGACGGATGGGAAAAT
GACTGGGATGATTAG