Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068867
CDS Infomation

pacid=37476579 polypeptide=PGSC0003DMP400046528 locus=PGSC0003DMG400026783 ID=PGSC0003DMT400068867.v4.03 annot-version=v4.03
Sequence

ATGGGCGTAGGAGAAAAGGGTCAGCCCCGCAAGAAGATTAAACCTACAATTACTGAAGTT
GAAGTTGAAGATGAAGATGAAGATGAATTCGGAGGAGAATTAATGAATGATTTTACAAAG
TTGGAGCTCAAACCTGATCATGAAAATCGTCCATTATGGGTGTGTTGTGACGGTCGTGTT
TTCCTCGAAACATCTTCTCCTATTTACCACCAAGCTTCTGATTTCCTTATAGCTATTGCT
GAACCTGTTTCCCGCCCTAATTCCATTCATGAATACAACCTTACCCCTCACTCTCTTTAC
GCTGCTGTTTCTGTAAGTCTACAAACTCATACTATCATCTCTGTTCTCAACAAATTATCA
AAAACTAACCTTCCGAAAGAGGTGGTTGATTTTATTCAATCTTCCACCTCTAATTATGGT
AAAGTAAAACTAGTCCTCAAGAAAAATCGTTACTTCATCGAATCACCATGCCCGTTAGTA
TTGAAAACGTTGCTTAAGGATGATGTAATATCTCGAGCACGAATCGCAAATACAATTGAA
GAAGAGGAGGCTGAATATTCCTTTGAAATTGACCCTGCGCAAGTTGAAAGTGTAAAGCAA
CGTTGCTTACCGAATGCCTTAAATTATCCTATGTTGGAAGAGTACGATTTCAGGAACGAT
ACTGTAAATCCTGATTTGGATATAGAGTTGAAAATTAACGCTCAGCCACGGCCTTATCAA
GTGAAGAGTCTTAGTAAGATGTTTGGGAATGGGAGAGCTAGGTCTGGTATTATCGTGCTT
CCGTGTGGTGCAGGCAAATCGTTGGTTGGTGTTTCAGCAGCTACTAGAATTAATAAGAGC
TGTCTTTGTTTAGCTACAAATGCAGTATCTGTTGATCAGTGGGCTTACCAATTCCGTCTT
TGGTCTACCATTCGAGATGATCAAATATGTCGTTTCACTACTGACAGTAAGGAGCAATTT
CGCGGGGATGCTGGAGTTGTGGTGACGACTTATAACATGGTTGCTTTTGGAGGGAAACGT
TCTGAAGAATCTGAGAAGCTTATTGAACAAATACGAAACAGAGAATGGGGATTGCTTCTG
TTAGATGAGGTTCATGTAGTTCCTGCACAGATGTTTAGGAAAGTCATCAGCATCACAAAA
TCTCACTGCAAACTTGGACTTACTGCCACATTGGTTAGGGAAGACGAAAGGATTACCGAT
TTGAATTTCCTTATCGGTCCTAAGTTGTACGAGGCTAATTGGTCTGATTTAGCCAAAGGA
GGATTTATTGCAAATGTGCAGTGTGCTGAAGTTTGGTGTCCCATGACTAAGGAGTTTTTT
GCTGAGTATTTGAAACAGGAAAATCATAGGAAGAGGAAGGCATTGTACGTAATGAATCCT
AATAAATTCAGGGCTTGTGAGTTTCTCATCAGGTTCCACGAGCAGCAGCGTGATGACAAG
ATCATAGTGTTTTCTGACAACTTGTTTGCATTGACAGAGTATTCAATGAGGCTTCGGAAG
CCTATGATCTATGGTTGTACCAGCCACGCCGAGAGAATGAAAATTCTCGAGGCATTTAGA
ACTAATCCTGAAGTGAACACCATTTTTCTTTCAAAAGTGGGTGACAACTCCATAGACATC
CCTGAAGCAAATGTGATCATTCAAATTTCGTCCCATGCTGGTTCAAGGCGCCAAGAGGCA
CAACGACTAGGCCGTATACTCAGGGCAAAGAGGGCGCGCCTTCAAGGGGGATCAAAGACA
GAGGAATACGATGCCTTCTTTTACTCACTTGTATCCACTGATACACAAGAAATGTACTAC
TCAACAAAGAGACAGCAATTCCTGATTGATCAAGGTTACAGCTTTAAGGTGATCACAAAC
TTGCCTCCACCAGACTCAGGGCCTGAGTTGAGTTATTACCATGTAGGCGAACAGCTTGAG
CTTCTTGGGAGGGTACTTAGTGCTGGCGATGATATAGTTGGTATGGAAGAAACAGAAGAA
GAAGAAGAAGACTCCGATGGAAAAGTCGCTAGTAGAGAAAATCGTACAGTGGGATCAATG
AGTACTTATTCAGGAGCCAAAGAAATTATCTATATGGAATACAGTGGAGGGCAGAAGAAA
CCTGGAGCTGGAGGAGTTGTCCAGACAAAGAGCAAGCCCAAGGATTTGTCCAAGAGACAC
GTTTTGTTCAAAAAACGCTACGTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400046528
PEP Infomation

pacid=37476579 transcript=PGSC0003DMT400068867 locus=PGSC0003DMG400026783 ID=PGSC0003DMT400068867.v4.03 annot-version=v4.03
Sequence

MGVGEKGQPRKKIKPTITEVEVEDEDEDEFGGELMNDFTKLELKPDHENRPLWVCCDGRV
FLETSSPIYHQASDFLIAIAEPVSRPNSIHEYNLTPHSLYAAVSVSLQTHTIISVLNKLS
KTNLPKEVVDFIQSSTSNYGKVKLVLKKNRYFIESPCPLVLKTLLKDDVISRARIANTIE
EEEAEYSFEIDPAQVESVKQRCLPNALNYPMLEEYDFRNDTVNPDLDIELKINAQPRPYQ
VKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAATRINKSCLCLATNAVSVDQWAYQFRL
WSTIRDDQICRFTTDSKEQFRGDAGVVVTTYNMVAFGGKRSEESEKLIEQIRNREWGLLL
LDEVHVVPAQMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWSDLAKG
GFIANVQCAEVWCPMTKEFFAEYLKQENHRKRKALYVMNPNKFRACEFLIRFHEQQRDDK
IIVFSDNLFALTEYSMRLRKPMIYGCTSHAERMKILEAFRTNPEVNTIFLSKVGDNSIDI
PEANVIIQISSHAGSRRQEAQRLGRILRAKRARLQGGSKTEEYDAFFYSLVSTDTQEMYY
STKRQQFLIDQGYSFKVITNLPPPDSGPELSYYHVGEQLELLGRVLSAGDDIVGMEETEE
EEEDSDGKVASRENRTVGSMSTYSGAKEIIYMEYSGGQKKPGAGGVVQTKSKPKDLSKRH
VLFKKRYV*

Transcript Sequence

Transcript ID

PGSC0003DMT400068867
Transcript Infomation

pacid=37476579 locus=PGSC0003DMG400026783 ID=PGSC0003DMT400068867.v4.03 annot-version=v4.03
Sequence

ATGGGCGTAGGAGAAAAGGGTCAGCCCCGCAAGAAGATTAAACCTACAATTACTGAAGTT
GAAGTTGAAGATGAAGATGAAGATGAATTCGGAGGAGAATTAATGAATGATTTTACAAAG
TTGGAGCTCAAACCTGATCATGAAAATCGTCCATTATGGGTGTGTTGTGACGGTCGTGTT
TTCCTCGAAACATCTTCTCCTATTTACCACCAAGCTTCTGATTTCCTTATAGCTATTGCT
GAACCTGTTTCCCGCCCTAATTCCATTCATGAATACAACCTTACCCCTCACTCTCTTTAC
GCTGCTGTTTCTGTAAGTCTACAAACTCATACTATCATCTCTGTTCTCAACAAATTATCA
AAAACTAACCTTCCGAAAGAGGTGGTTGATTTTATTCAATCTTCCACCTCTAATTATGGT
AAAGTAAAACTAGTCCTCAAGAAAAATCGTTACTTCATCGAATCACCATGCCCGTTAGTA
TTGAAAACGTTGCTTAAGGATGATGTAATATCTCGAGCACGAATCGCAAATACAATTGAA
GAAGAGGAGGCTGAATATTCCTTTGAAATTGACCCTGCGCAAGTTGAAAGTGTAAAGCAA
CGTTGCTTACCGAATGCCTTAAATTATCCTATGTTGGAAGAGTACGATTTCAGGAACGAT
ACTGTAAATCCTGATTTGGATATAGAGTTGAAAATTAACGCTCAGCCACGGCCTTATCAA
GTGAAGAGTCTTAGTAAGATGTTTGGGAATGGGAGAGCTAGGTCTGGTATTATCGTGCTT
CCGTGTGGTGCAGGCAAATCGTTGGTTGGTGTTTCAGCAGCTACTAGAATTAATAAGAGC
TGTCTTTGTTTAGCTACAAATGCAGTATCTGTTGATCAGTGGGCTTACCAATTCCGTCTT
TGGTCTACCATTCGAGATGATCAAATATGTCGTTTCACTACTGACAGTAAGGAGCAATTT
CGCGGGGATGCTGGAGTTGTGGTGACGACTTATAACATGGTTGCTTTTGGAGGGAAACGT
TCTGAAGAATCTGAGAAGCTTATTGAACAAATACGAAACAGAGAATGGGGATTGCTTCTG
TTAGATGAGGTTCATGTAGTTCCTGCACAGATGTTTAGGAAAGTCATCAGCATCACAAAA
TCTCACTGCAAACTTGGACTTACTGCCACATTGGTTAGGGAAGACGAAAGGATTACCGAT
TTGAATTTCCTTATCGGTCCTAAGTTGTACGAGGCTAATTGGTCTGATTTAGCCAAAGGA
GGATTTATTGCAAATGTGCAGTGTGCTGAAGTTTGGTGTCCCATGACTAAGGAGTTTTTT
GCTGAGTATTTGAAACAGGAAAATCATAGGAAGAGGAAGGCATTGTACGTAATGAATCCT
AATAAATTCAGGGCTTGTGAGTTTCTCATCAGGTTCCACGAGCAGCAGCGTGATGACAAG
ATCATAGTGTTTTCTGACAACTTGTTTGCATTGACAGAGTATTCAATGAGGCTTCGGAAG
CCTATGATCTATGGTTGTACCAGCCACGCCGAGAGAATGAAAATTCTCGAGGCATTTAGA
ACTAATCCTGAAGTGAACACCATTTTTCTTTCAAAAGTGGGTGACAACTCCATAGACATC
CCTGAAGCAAATGTGATCATTCAAATTTCGTCCCATGCTGGTTCAAGGCGCCAAGAGGCA
CAACGACTAGGCCGTATACTCAGGGCAAAGAGGGCGCGCCTTCAAGGGGGATCAAAGACA
GAGGAATACGATGCCTTCTTTTACTCACTTGTATCCACTGATACACAAGAAATGTACTAC
TCAACAAAGAGACAGCAATTCCTGATTGATCAAGGTTACAGCTTTAAGGTGATCACAAAC
TTGCCTCCACCAGACTCAGGGCCTGAGTTGAGTTATTACCATGTAGGCGAACAGCTTGAG
CTTCTTGGGAGGGTACTTAGTGCTGGCGATGATATAGTTGGTATGGAAGAAACAGAAGAA
GAAGAAGAAGACTCCGATGGAAAAGTCGCTAGTAGAGAAAATCGTACAGTGGGATCAATG
AGTACTTATTCAGGAGCCAAAGAAATTATCTATATGGAATACAGTGGAGGGCAGAAGAAA
CCTGGAGCTGGAGGAGTTGTCCAGACAAAGAGCAAGCCCAAGGATTTGTCCAAGAGACAC
GTTTTGTTCAAAAAACGCTACGTCTAA