Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068742
CDS Infomation

pacid=37430871 polypeptide=PGSC0003DMP400046451 locus=PGSC0003DMG400026732 ID=PGSC0003DMT400068742.v4.03 annot-version=v4.03
Sequence

ATGTGCTCTATCAATTCAGTGCAGGCCGATGAAGGCTGCAGTTTACTAAATGCCAGATTG
GCGGGATTGCAAAAGAAGTGGAATGATATATGCCAGCGTCTTCATCACATACATTCATTT
CAACCAGATGCTTTGCAAGCCAGGTCACATCTTCCCAGTTTGGGCATCTTTCAGAGTTCT
GCTGCTGGGGACGAAAGCAGAAACAAAGATTTACTGTTGGATGCAAGACTTACTAATCAA
AGTTCAATGTCATCAGACTTGCAAAATACCTCCTGGACCAAAAATACCATGTCAAAATCA
GTCGTGTCTGAAGGTGATTCTGATTCCCAAGCTGAAGTACCGGCTCAGAGTTTAGAAACT
CAGCATCTGAAGATGGAAAATATCTGGACCCCGTACCGTCATGCTCTCCGTGATTTGAGC
CTGCCCCTTGATCGAACATCATCAGCCTCAAAAGCTTCTGTTAGCACAGACCTGGGGTTG
GGAACTGTTCACATATCCACTGTAAGAGATCTGTCGAAACCCAGTTTTCCGGAGAATGAG
GATCGCCTTCCTTACTTTTCAGGATCGTTTTCTTCCTCTGTTCCTCAGTTAGACAAGGAC
TTGGATGTGGAAGACTTTAAGAACCTTTATAAAGCTCTTTCTGGACATGTTTATTGGCAA
GAGGAAGCCATTTATGCCATTAGTCATACTGTCGCTCGCTGCAGAAGTGGTAATGGAAGG
AGTCATGTCTCTAGCAAAGGAAATATCTGGCTCAGCTTCATTGGACCTGACGAGGTGGGG
AAACAAAAAATTGCAAAAGCTCTTGCTGAGAATGTCTTTGGTAACTACAATAGCTTGCTC
TCTGTGGATCTGGGCTCTAGCGATGGGATTAGCTGCTCAAATTCTCTGCTTATCCATCAA
AATATAAGAAATGGTCACATGAATCTTAGGGGAAAGACAGTCATTGACTACATCGCAGAG
GAGTTAAGCAAGAAGCGCTGTTCTATTGTGCTTCTTGAAAACATAGAAAAGGCTGATTTT
CCTGTTCAGAATAGCTTATCTCGCGCTATCAGAACTGGTAAATTTTTGAACTTGCACGGG
AAGGAAACCAGTATCAATAATATGATTTTTGTGCTTACCTCGAAATCTGCAAAAGTTACT
AAAGATTTCTTTTCCAGTAAAAAATCTCTCGAGTTTTCAGAAGAAAAGATATTAGCAGCC
AAAAACTTGCAGATGCAGATAGCAATTGGATCTGGCTATCGAAATAGGATTGAAGTGAAG
AATACAAATTTGTGGATTACTTCAGGGGATAGAACATTAGAATCTTTCTCTGCATATAAA
AGAAAGCAGACAGACAACAGTGACTCGAACGATGACAAGTTGCTTCAAATGCCAAAACGT
TTGTGCACTGTCCCAAAATCTTCTCTTGATTTGAATTTGCCTGTGGAAGAGATGGAGGAG
GAGAATGAATGTGATGAGTGTGACAGTGACTCTGGTTCTGAAGGGTCAAAAGCATGGTTG
GAAGAAATCTTAGAGCAAATGGACAACAATGTGGTCTTCAAGCCATTTGATTTTGGAGCT
CTAGCTGAGAAAATCTTGAATGAAATCAACATAAACCTTAAGAAGATTGTTGGAGTAGAT
ATCAAGCTGGAGATTGACTCAGAAGTAATGGTACAGATACTTGCTGCTGCTTGGTTATCA
GACAGAAAGGAAGCTGTTGAGGATTGGGTTGAGAAGGTTCTCTGCAGGAGCTTTATGGAT
GTCCGAAACAGGTTCCAACATATTGCTGATAGTGTGATAAGATTAGTTCATTGTCAAGGC
ATTGCTGTAGAAGACCAGGCTCCTGGAATTTACTTTCCGGCAAAAATAACAATAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400046451
PEP Infomation

pacid=37430871 transcript=PGSC0003DMT400068742 locus=PGSC0003DMG400026732 ID=PGSC0003DMT400068742.v4.03 annot-version=v4.03
Sequence

MCSINSVQADEGCSLLNARLAGLQKKWNDICQRLHHIHSFQPDALQARSHLPSLGIFQSS
AAGDESRNKDLLLDARLTNQSSMSSDLQNTSWTKNTMSKSVVSEGDSDSQAEVPAQSLET
QHLKMENIWTPYRHALRDLSLPLDRTSSASKASVSTDLGLGTVHISTVRDLSKPSFPENE
DRLPYFSGSFSSSVPQLDKDLDVEDFKNLYKALSGHVYWQEEAIYAISHTVARCRSGNGR
SHVSSKGNIWLSFIGPDEVGKQKIAKALAENVFGNYNSLLSVDLGSSDGISCSNSLLIHQ
NIRNGHMNLRGKTVIDYIAEELSKKRCSIVLLENIEKADFPVQNSLSRAIRTGKFLNLHG
KETSINNMIFVLTSKSAKVTKDFFSSKKSLEFSEEKILAAKNLQMQIAIGSGYRNRIEVK
NTNLWITSGDRTLESFSAYKRKQTDNSDSNDDKLLQMPKRLCTVPKSSLDLNLPVEEMEE
ENECDECDSDSGSEGSKAWLEEILEQMDNNVVFKPFDFGALAEKILNEININLKKIVGVD
IKLEIDSEVMVQILAAAWLSDRKEAVEDWVEKVLCRSFMDVRNRFQHIADSVIRLVHCQG
IAVEDQAPGIYFPAKITIE*

Transcript Sequence

Transcript ID

PGSC0003DMT400068742
Transcript Infomation

pacid=37430871 locus=PGSC0003DMG400026732 ID=PGSC0003DMT400068742.v4.03 annot-version=v4.03
Sequence

ATGTGCTCTATCAATTCAGTGCAGGCCGATGAAGGCTGCAGTTTACTAAATGCCAGATTG
GCGGGATTGCAAAAGAAGTGGAATGATATATGCCAGCGTCTTCATCACATACATTCATTT
CAACCAGATGCTTTGCAAGCCAGGTCACATCTTCCCAGTTTGGGCATCTTTCAGAGTTCT
GCTGCTGGGGACGAAAGCAGAAACAAAGATTTACTGTTGGATGCAAGACTTACTAATCAA
AGTTCAATGTCATCAGACTTGCAAAATACCTCCTGGACCAAAAATACCATGTCAAAATCA
GTCGTGTCTGAAGGTGATTCTGATTCCCAAGCTGAAGTACCGGCTCAGAGTTTAGAAACT
CAGCATCTGAAGATGGAAAATATCTGGACCCCGTACCGTCATGCTCTCCGTGATTTGAGC
CTGCCCCTTGATCGAACATCATCAGCCTCAAAAGCTTCTGTTAGCACAGACCTGGGGTTG
GGAACTGTTCACATATCCACTGTAAGAGATCTGTCGAAACCCAGTTTTCCGGAGAATGAG
GATCGCCTTCCTTACTTTTCAGGATCGTTTTCTTCCTCTGTTCCTCAGTTAGACAAGGAC
TTGGATGTGGAAGACTTTAAGAACCTTTATAAAGCTCTTTCTGGACATGTTTATTGGCAA
GAGGAAGCCATTTATGCCATTAGTCATACTGTCGCTCGCTGCAGAAGTGGTAATGGAAGG
AGTCATGTCTCTAGCAAAGGAAATATCTGGCTCAGCTTCATTGGACCTGACGAGGTGGGG
AAACAAAAAATTGCAAAAGCTCTTGCTGAGAATGTCTTTGGTAACTACAATAGCTTGCTC
TCTGTGGATCTGGGCTCTAGCGATGGGATTAGCTGCTCAAATTCTCTGCTTATCCATCAA
AATATAAGAAATGGTCACATGAATCTTAGGGGAAAGACAGTCATTGACTACATCGCAGAG
GAGTTAAGCAAGAAGCGCTGTTCTATTGTGCTTCTTGAAAACATAGAAAAGGCTGATTTT
CCTGTTCAGAATAGCTTATCTCGCGCTATCAGAACTGGTAAATTTTTGAACTTGCACGGG
AAGGAAACCAGTATCAATAATATGATTTTTGTGCTTACCTCGAAATCTGCAAAAGTTACT
AAAGATTTCTTTTCCAGTAAAAAATCTCTCGAGTTTTCAGAAGAAAAGATATTAGCAGCC
AAAAACTTGCAGATGCAGATAGCAATTGGATCTGGCTATCGAAATAGGATTGAAGTGAAG
AATACAAATTTGTGGATTACTTCAGGGGATAGAACATTAGAATCTTTCTCTGCATATAAA
AGAAAGCAGACAGACAACAGTGACTCGAACGATGACAAGTTGCTTCAAATGCCAAAACGT
TTGTGCACTGTCCCAAAATCTTCTCTTGATTTGAATTTGCCTGTGGAAGAGATGGAGGAG
GAGAATGAATGTGATGAGTGTGACAGTGACTCTGGTTCTGAAGGGTCAAAAGCATGGTTG
GAAGAAATCTTAGAGCAAATGGACAACAATGTGGTCTTCAAGCCATTTGATTTTGGAGCT
CTAGCTGAGAAAATCTTGAATGAAATCAACATAAACCTTAAGAAGATTGTTGGAGTAGAT
ATCAAGCTGGAGATTGACTCAGAAGTAATGGTACAGATACTTGCTGCTGCTTGGTTATCA
GACAGAAAGGAAGCTGTTGAGGATTGGGTTGAGAAGGTTCTCTGCAGGAGCTTTATGGAT
GTCCGAAACAGGTTCCAACATATTGCTGATAGTGTGATAAGATTAGTTCATTGTCAAGGC
ATTGCTGTAGAAGACCAGGCTCCTGGAATTTACTTTCCGGCAAAAATAACAATAGAATGA