Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068735
CDS Infomation

pacid=37464561 polypeptide=PGSC0003DMP400046446 locus=PGSC0003DMG400026729 ID=PGSC0003DMT400068735.v4.03 annot-version=v4.03
Sequence

ATGATGAATGTAAGCTTATCCTTTTGTCAGCCATCAACACTCTGCACAAGTAAAAGACAA
TTGCTTCCCTCCACCTCCACCCCCATTTTATTTAGCTTCTCTCATTCTCATAAGAAACTT
CGGCGTTTTGTGACTTGTGCTTCTTCCTCAGAGCTTCCGCTTCTCCCTTTCCCTATTGAC
CAGGTATTAGTTCCTTCAGAGACAAAGACACTACATTTGTATGAAGCAAGATACTTGGCA
CTCTTAGAGGAGTCTCTTTTTAAGAAGAAGAAGTTCTTTGTGCACTTTGTTCTAGATCCT
ATAGCCATCAATGATACATCAGGAGAAGCATCTTTTGCTGCCAGATACGGTTGCCTGGTT
GCAATTGAAAAAGTTGAGCAATTGGAGATTGGTGCATTGGTATCTATTAGGGGTATAGGC
CGTGTCAAAATTCTGAAATTTCAACAGGCAGAACCGTACTTGACAGGTGCGGTCAAACCA
TTGCTGGACAACATTCCATACAGTGATACAGAACTAAGTTCCAAAGTTTTGAAGATAAAA
GAAGCTCTCCGTAGTTTGAATAGCTTGGAAATAAAGCTGAAGGCTCCTCAGGAAGCTTTG
TTGCAAACTTTAACTGCAAACTCTTTGAGATGGTCTGAGAATACACCTTCTCTGGATTGT
GACAACAGCTTCATTCCACCTCTCGCTGAGCTTGTATCCTTTGCAGCACTTCAACCTGTT
TCTGGATCCTCTGAGTCAGAACTGCTGAAGCTGCAAAAGAAGAAGTTGAGGGCAATGGAC
ATCAAGGACACCCTAGACAGACTTGAAGATTCCATTGGATACGTGCAAGATAATATTTCC
TTAGTAGCAGCCAAGCTTGCAATCCAATCTTTAGATTCCCGGTTATGA

Peptide Sequence

PEP ID

PGSC0003DMP400046446
PEP Infomation

pacid=37464561 transcript=PGSC0003DMT400068735 locus=PGSC0003DMG400026729 ID=PGSC0003DMT400068735.v4.03 annot-version=v4.03
Sequence

MMNVSLSFCQPSTLCTSKRQLLPSTSTPILFSFSHSHKKLRRFVTCASSSELPLLPFPID
QVLVPSETKTLHLYEARYLALLEESLFKKKKFFVHFVLDPIAINDTSGEASFAARYGCLV
AIEKVEQLEIGALVSIRGIGRVKILKFQQAEPYLTGAVKPLLDNIPYSDTELSSKVLKIK
EALRSLNSLEIKLKAPQEALLQTLTANSLRWSENTPSLDCDNSFIPPLAELVSFAALQPV
SGSSESELLKLQKKKLRAMDIKDTLDRLEDSIGYVQDNISLVAAKLAIQSLDSRL*

Transcript Sequence

Transcript ID

PGSC0003DMT400068735
Transcript Infomation

pacid=37464561 locus=PGSC0003DMG400026729 ID=PGSC0003DMT400068735.v4.03 annot-version=v4.03
Sequence

ATGATGAATGTAAGCTTATCCTTTTGTCAGCCATCAACACTCTGCACAAGTAAAAGACAA
TTGCTTCCCTCCACCTCCACCCCCATTTTATTTAGCTTCTCTCATTCTCATAAGAAACTT
CGGCGTTTTGTGACTTGTGCTTCTTCCTCAGAGCTTCCGCTTCTCCCTTTCCCTATTGAC
CAGGTATTAGTTCCTTCAGAGACAAAGACACTACATTTGTATGAAGCAAGATACTTGGCA
CTCTTAGAGGAGTCTCTTTTTAAGAAGAAGAAGTTCTTTGTGCACTTTGTTCTAGATCCT
ATAGCCATCAATGATACATCAGGAGAAGCATCTTTTGCTGCCAGATACGGTTGCCTGGTT
GCAATTGAAAAAGTTGAGCAATTGGAGATTGGTGCATTGGTATCTATTAGGGGTATAGGC
CGTGTCAAAATTCTGAAATTTCAACAGGCAGAACCGTACTTGACAGGTGCGGTCAAACCA
TTGCTGGACAACATTCCATACAGTGATACAGAACTAAGTTCCAAAGTTTTGAAGATAAAA
GAAGCTCTCCGTAGTTTGAATAGCTTGGAAATAAAGCTGAAGGCTCCTCAGGAAGCTTTG
TTGCAAACTTTAACTGCAAACTCTTTGAGATGGTCTGAGAATACACCTTCTCTGGATTGT
GACAACAGCTTCATTCCACCTCTCGCTGAGCTTGTATCCTTTGCAGCACTTCAACCTGTT
TCTGGATCCTCTGAGTCAGAACTGCTGAAGCTGCAAAAGAAGAAGTTGAGGGCAATGGAC
ATCAAGGACACCCTAGACAGACTTGAAGATTCCATTGGATACGTGCAAGATAATATTTCC
TTAGTAGCAGCCAAGCTTGCAATCCAATCTTTAGATTCCCGGTTATGA