Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068625
CDS Infomation

pacid=37429100 polypeptide=PGSC0003DMP400046369 locus=PGSC0003DMG400026683 ID=PGSC0003DMT400068625.v4.03 annot-version=v4.03
Sequence

ATGACCATGCATACTAGTGTTTCATCGTCTCCTCTTGGGCCGCCGGCATGTGAGAAGGAT
GCTAAGGCCCTTCAATTCATCGAAGAGATGACTAGAAATGTTGATTCAGTTCAACAGAAA
GTTTTGGCTGAAATACTAAGCCAAAATGCCAACACTGAGTATCTTCAAAGATTCAAACTA
GGTGGTGCTATGGATCGGGATACATTCAAGTCCAAAATGCCAATTGTCACGTATGAGGAA
ATTCAACATGATATTCAACGTATTGCTAATGGAGATCGTTCTCCAATTTTCTCATCTCAT
CCCATCTCTGAGTTCCTCACCAGCTCGGGGACATCTGCTGGTGAGAGAAAGCTGATGCCC
ACAACTCAAGATGAGTTAGACCGGAAACAACTATTGTACAGCCTTCTCATGCCCGTGATG
AATCTGTATGTCCCTGGTCTAGACAAAGGGAAGGGCTTGTACTTTCTATTTATAAAAGCA
GAAACCAAGACACCCAGTGGGCTACTAGCAAGACCTGTCTTGACAAGTTACTACAAAAGT
GATCACTTCAAGACGAGGCCATACGATCCTTACAATGTGTATACTAGTCCCAATGAAGCT
GTACTCTGTGTCGACTCTTTCCAGAGCATGTACTCACAAATGCTTTGTGGCCTTCTTATG
AGAGAACAAGTCCTCCGGTTAGGGGCTGTTTTTGCCTCTGGTCTACTTCGAGCTATTCAT
TTTCTTCAACTCAATTGGCAGCAACTTGCTAAAGATATCGCATCAGGAATATTGAATCCC
CGAGTTTCTGACCCTTCAATAAGGGAATGCATCTCCAAAATACTTAAACCAAATCACGAA
CTCGCAGAGTTCATTATTAAGGAATGCGAAAAACAGAACTGGGAAGGGATTATCACTAGA
ATTTGGCCAAATACAAAGTACTTGGATGTGATTGTCACAGGTGCAATGGCTCAGTACATC
CCTACGCTCGATTATTACAGTGGTGGTTTACCAAAGGCATGTACCATGTACGCATCGTCC
GAGTGTTATTTTGGCCTTAATTTAAATCCAATGTGCAAGCCATCTGAAGTATGTTACACT
ATAATGCCCAATATGTGCTACTATGAGTTTATCCCTCATGACTCAACCAATCCTCGTGAC
TCACCACCCCGTCTCGTGGACCTAGCCAACGTAGAAGTGGGGAAAGAATACGAGCTCGTG
ATCACAACCTACGCTGGATTATGTCGTTACAGAGTCGGTGACATACTCCAGGTCACGGGG
TTTCACAACTCTGCTCCTCAGTTTAAATTCATAAGAAGGAAAAATGTGCTATTGAGCATT
GATTCGGACAAAACTGATGAGGCCGAGTTGCAAAACGCTGTTGATAGCGCTGCTGCAATT
TTGCGCCTGTACAATACTAGCGTGGTCGAGTACACTAGTTATGCCGACACTAAAACCATT
CCGGGACATTACGTTATTTACTATGAATTACTTATTAAGGACCCAACCAATTCGCCAAGC
CACGAGGTTTTGAACCAATGTTGTTTGGCTATGGAAGAATGTTTGAACTCGGTTTATCGA
CAGTGCCGAGTTGCAGATAACTCAATTGGACCACTTGAAATTAGAGTAGTGGAAAATGGT
ACATTTGAAGAGCTAATGGACTATGCAATTTCTAGAGGTGCATCTATAAATCAGTATAAG
GCTCCTAGGTGTGTTAATTTTACACCTATAGTGGAATTATTGGACTCCAGGGTTATTTCA
GTGCATTTTAGTGCAACTGCTCCTCATTGGACCCCAGAACGACAGCGTTTACAAGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400046369
PEP Infomation

pacid=37429100 transcript=PGSC0003DMT400068625 locus=PGSC0003DMG400026683 ID=PGSC0003DMT400068625.v4.03 annot-version=v4.03
Sequence

MTMHTSVSSSPLGPPACEKDAKALQFIEEMTRNVDSVQQKVLAEILSQNANTEYLQRFKL
GGAMDRDTFKSKMPIVTYEEIQHDIQRIANGDRSPIFSSHPISEFLTSSGTSAGERKLMP
TTQDELDRKQLLYSLLMPVMNLYVPGLDKGKGLYFLFIKAETKTPSGLLARPVLTSYYKS
DHFKTRPYDPYNVYTSPNEAVLCVDSFQSMYSQMLCGLLMREQVLRLGAVFASGLLRAIH
FLQLNWQQLAKDIASGILNPRVSDPSIRECISKILKPNHELAEFIIKECEKQNWEGIITR
IWPNTKYLDVIVTGAMAQYIPTLDYYSGGLPKACTMYASSECYFGLNLNPMCKPSEVCYT
IMPNMCYYEFIPHDSTNPRDSPPRLVDLANVEVGKEYELVITTYAGLCRYRVGDILQVTG
FHNSAPQFKFIRRKNVLLSIDSDKTDEAELQNAVDSAAAILRLYNTSVVEYTSYADTKTI
PGHYVIYYELLIKDPTNSPSHEVLNQCCLAMEECLNSVYRQCRVADNSIGPLEIRVVENG
TFEELMDYAISRGASINQYKAPRCVNFTPIVELLDSRVISVHFSATAPHWTPERQRLQV*

Transcript Sequence

Transcript ID

PGSC0003DMT400068625
Transcript Infomation

pacid=37429100 locus=PGSC0003DMG400026683 ID=PGSC0003DMT400068625.v4.03 annot-version=v4.03
Sequence

ATGACCATGCATACTAGTGTTTCATCGTCTCCTCTTGGGCCGCCGGCATGTGAGAAGGAT
GCTAAGGCCCTTCAATTCATCGAAGAGATGACTAGAAATGTTGATTCAGTTCAACAGAAA
GTTTTGGCTGAAATACTAAGCCAAAATGCCAACACTGAGTATCTTCAAAGATTCAAACTA
GGTGGTGCTATGGATCGGGATACATTCAAGTCCAAAATGCCAATTGTCACGTATGAGGAA
ATTCAACATGATATTCAACGTATTGCTAATGGAGATCGTTCTCCAATTTTCTCATCTCAT
CCCATCTCTGAGTTCCTCACCAGCTCGGGGACATCTGCTGGTGAGAGAAAGCTGATGCCC
ACAACTCAAGATGAGTTAGACCGGAAACAACTATTGTACAGCCTTCTCATGCCCGTGATG
AATCTGTATGTCCCTGGTCTAGACAAAGGGAAGGGCTTGTACTTTCTATTTATAAAAGCA
GAAACCAAGACACCCAGTGGGCTACTAGCAAGACCTGTCTTGACAAGTTACTACAAAAGT
GATCACTTCAAGACGAGGCCATACGATCCTTACAATGTGTATACTAGTCCCAATGAAGCT
GTACTCTGTGTCGACTCTTTCCAGAGCATGTACTCACAAATGCTTTGTGGCCTTCTTATG
AGAGAACAAGTCCTCCGGTTAGGGGCTGTTTTTGCCTCTGGTCTACTTCGAGCTATTCAT
TTTCTTCAACTCAATTGGCAGCAACTTGCTAAAGATATCGCATCAGGAATATTGAATCCC
CGAGTTTCTGACCCTTCAATAAGGGAATGCATCTCCAAAATACTTAAACCAAATCACGAA
CTCGCAGAGTTCATTATTAAGGAATGCGAAAAACAGAACTGGGAAGGGATTATCACTAGA
ATTTGGCCAAATACAAAGTACTTGGATGTGATTGTCACAGGTGCAATGGCTCAGTACATC
CCTACGCTCGATTATTACAGTGGTGGTTTACCAAAGGCATGTACCATGTACGCATCGTCC
GAGTGTTATTTTGGCCTTAATTTAAATCCAATGTGCAAGCCATCTGAAGTATGTTACACT
ATAATGCCCAATATGTGCTACTATGAGTTTATCCCTCATGACTCAACCAATCCTCGTGAC
TCACCACCCCGTCTCGTGGACCTAGCCAACGTAGAAGTGGGGAAAGAATACGAGCTCGTG
ATCACAACCTACGCTGGATTATGTCGTTACAGAGTCGGTGACATACTCCAGGTCACGGGG
TTTCACAACTCTGCTCCTCAGTTTAAATTCATAAGAAGGAAAAATGTGCTATTGAGCATT
GATTCGGACAAAACTGATGAGGCCGAGTTGCAAAACGCTGTTGATAGCGCTGCTGCAATT
TTGCGCCTGTACAATACTAGCGTGGTCGAGTACACTAGTTATGCCGACACTAAAACCATT
CCGGGACATTACGTTATTTACTATGAATTACTTATTAAGGACCCAACCAATTCGCCAAGC
CACGAGGTTTTGAACCAATGTTGTTTGGCTATGGAAGAATGTTTGAACTCGGTTTATCGA
CAGTGCCGAGTTGCAGATAACTCAATTGGACCACTTGAAATTAGAGTAGTGGAAAATGGT
ACATTTGAAGAGCTAATGGACTATGCAATTTCTAGAGGTGCATCTATAAATCAGTATAAG
GCTCCTAGGTGTGTTAATTTTACACCTATAGTGGAATTATTGGACTCCAGGGTTATTTCA
GTGCATTTTAGTGCAACTGCTCCTCATTGGACCCCAGAACGACAGCGTTTACAAGTGTAA