Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068603
CDS Infomation

pacid=37478771 polypeptide=PGSC0003DMP400046356 locus=PGSC0003DMG400026671 ID=PGSC0003DMT400068603.v4.03 annot-version=v4.03
Sequence

ATGCCTGCTCTAGGTTGTTGTGTAGAATCTGCTGTTTCCCCTCCTCTTGGCTATTCCTTC
CTTTCCACGCCGGAGATTTTTTCCTCCGGCGTACCTCCGTCGACAAACGCTGTCCCTTTT
ACCACCCATTGGTCACCGGAGCTCTCATCCGATCTGTATCGGGTTGATGGATGGGGTGCT
CCTTATTTCACCGTTAATTCTTCCGGTGATATATCTGTCCGGCCACATGGTACAGATACC
CTTCCTCACCAGGAAATTGATCTCCTTAAGGTTGTGAAGAAGGCTTCCGACCCGATAAAT
TCTGGTGGGCTCGGGTTACAACTTCCACTCGTTGTTCGGTTTCCTGATGTTTTGAAGAAC
CGATTGGAGTCTCTTCAATCGGCTTTTGATTATGCTGTCCAATCTGAAGGATATGAGGCT
CATTACCAAGGTGTTTATCCTGTTAAATGCAATCAGGACAGGTTCGTTGTTGAAGATATT
GTCAAATTCGGGTCGGGTTTCCGGTTTGGTCTTGAAGCTGGGTCAAAACCTGAGCTCCTC
CTAGCCATGAGCTCTCTATGCAAGGGCAGCTCGGAGGGTCTTCTTGTATGCAACGGATTC
AAGGATGCAGAATACATTTCACTTGCTTTGGTTGCAAGAAAGCTCCAATTGAACACGGTG
ATTGTGCTTGAACAAGAGGAGGAGCTTGATTTGGTGATTGACATCAGCCGTAAAATGGCG
GTCCGGCCTGTGATTGGGCTCCGGGCTAAGCTTAGGACCAAACATTCCGGTCATTTTGGA
TCCACTTCTGGAGAGAAAGGTAAGTTTGGGCTTACAACAACTCAGATCCTTCGTGTGGTG
AGGAAACTCGAAGAATCCGGAATGTTGGATTGTCTTCAGCTGCTGCATTTCCATATTGGA
TCTCAGATCCCTTCAACGGCGTTGCTTGCTGATGGTGTTGGTGAGGCTGCTCAGGTTTAT
TCTGAGTTGGTCCGCCTTGGTGCTGGCATGAAATTCATTGATATTGGCGGTGGGCTTGGA
ATTGACTACGATGGTACCAAATCTTCCGATTCTGATGTTTCCGTCGGATATGGCCTTCAG
GATTACGCCTCTACAGTTGTTCAAGCTGTCCGGTTTGTTTGTGACCGGAAGAACGTGAAG
CATCCGGTGATCTGTAGCGAAAGTGGCAGAGCAATTGTATCTCATCACTCTGTTCTGATA
TTTGAAGCTGTGTCTTCAACTACTACACGTTCTCAAGAGTTGTCCTCGGTGGGTCTCCAG
TCCTTTGTGGAGAAACTTAATGATGATGCTCGTGCTGATTACCGGAATCTATCTGCTGCT
GCTATTCGCGGAGAGTACGATACCTGTATGCTTTATGCCGATCAGTTGAAACAGAGATGT
GTGGAGCAGTTCAAAGACGGTAATTTGGACATTGAACAGCTTGCTGCCGTAGATGCCGTC
TGTGACTTTGTGTCAAAAGCTATTGGAGCTTCTGACCCTGTTCGCACATATCACGTGAAT
CTGTCCGTTTTCACTTCAATTCCTGATTTCTGGGCAATTGACCAACTATTCCCGATTGTT
CCCATCCACAAACTAGATGAACGTCCTTCAGCTCGGGGAATTCTATCCGACTTGACATGT
GACAGTGATGGAAAGATCGATAAATTCATTGGAGGCGAGTCAAGCTTGCCTCTCCATGAA
TTGGGAAGTGGAAATGGCGCGCCTTATTATCTGGGAATGTTTTTAGGCGGGGCATATGAG
GAAGCCCTCGGGGGACTCCATAACCTATTTGGCGGACCTAGCGTCTTGCGTGTGTCACAA
AGCGACAGCCCTCACAGCTTCGCTGTAACATATGCAGTGCCTGGGCCGTCCTGTGCTGAC
GTCCTCCGAGCAATGCAACACGAGCCTGAACTCATGTTCGAGACACTCAAGCACCGTGCG
GAGGAATTCATGCACAAGGAAGAAGAAGAAGAAGAAAATAAGGAAGTGGCATTTGCATCA
TTGGCCAGCAGCCTAAATCAGTCGTTCCACAACATGCCTTATCTTGCGCCACATTCGTCT
TGCTGCTTTAGTGCTGCTGCAAACAGCGGTGGGTATTACTATTGCAATGATGAGAATATT
GTTGGTGTTGGCGCAGAATGTGCAATAGGGGAGGAAGAGTTTTGGCCATACTGCGTTGCT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400046356
PEP Infomation

pacid=37478771 transcript=PGSC0003DMT400068603 locus=PGSC0003DMG400026671 ID=PGSC0003DMT400068603.v4.03 annot-version=v4.03
Sequence

MPALGCCVESAVSPPLGYSFLSTPEIFSSGVPPSTNAVPFTTHWSPELSSDLYRVDGWGA
PYFTVNSSGDISVRPHGTDTLPHQEIDLLKVVKKASDPINSGGLGLQLPLVVRFPDVLKN
RLESLQSAFDYAVQSEGYEAHYQGVYPVKCNQDRFVVEDIVKFGSGFRFGLEAGSKPELL
LAMSSLCKGSSEGLLVCNGFKDAEYISLALVARKLQLNTVIVLEQEEELDLVIDISRKMA
VRPVIGLRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLEESGMLDCLQLLHFHIG
SQIPSTALLADGVGEAAQVYSELVRLGAGMKFIDIGGGLGIDYDGTKSSDSDVSVGYGLQ
DYASTVVQAVRFVCDRKNVKHPVICSESGRAIVSHHSVLIFEAVSSTTTRSQELSSVGLQ
SFVEKLNDDARADYRNLSAAAIRGEYDTCMLYADQLKQRCVEQFKDGNLDIEQLAAVDAV
CDFVSKAIGASDPVRTYHVNLSVFTSIPDFWAIDQLFPIVPIHKLDERPSARGILSDLTC
DSDGKIDKFIGGESSLPLHELGSGNGAPYYLGMFLGGAYEEALGGLHNLFGGPSVLRVSQ
SDSPHSFAVTYAVPGPSCADVLRAMQHEPELMFETLKHRAEEFMHKEEEEEENKEVAFAS
LASSLNQSFHNMPYLAPHSSCCFSAAANSGGYYYCNDENIVGVGAECAIGEEEFWPYCVA
*

Transcript Sequence

Transcript ID

PGSC0003DMT400068603
Transcript Infomation

pacid=37478771 locus=PGSC0003DMG400026671 ID=PGSC0003DMT400068603.v4.03 annot-version=v4.03
Sequence

ATGCCTGCTCTAGGTTGTTGTGTAGAATCTGCTGTTTCCCCTCCTCTTGGCTATTCCTTC
CTTTCCACGCCGGAGATTTTTTCCTCCGGCGTACCTCCGTCGACAAACGCTGTCCCTTTT
ACCACCCATTGGTCACCGGAGCTCTCATCCGATCTGTATCGGGTTGATGGATGGGGTGCT
CCTTATTTCACCGTTAATTCTTCCGGTGATATATCTGTCCGGCCACATGGTACAGATACC
CTTCCTCACCAGGAAATTGATCTCCTTAAGGTTGTGAAGAAGGCTTCCGACCCGATAAAT
TCTGGTGGGCTCGGGTTACAACTTCCACTCGTTGTTCGGTTTCCTGATGTTTTGAAGAAC
CGATTGGAGTCTCTTCAATCGGCTTTTGATTATGCTGTCCAATCTGAAGGATATGAGGCT
CATTACCAAGGTGTTTATCCTGTTAAATGCAATCAGGACAGGTTCGTTGTTGAAGATATT
GTCAAATTCGGGTCGGGTTTCCGGTTTGGTCTTGAAGCTGGGTCAAAACCTGAGCTCCTC
CTAGCCATGAGCTCTCTATGCAAGGGCAGCTCGGAGGGTCTTCTTGTATGCAACGGATTC
AAGGATGCAGAATACATTTCACTTGCTTTGGTTGCAAGAAAGCTCCAATTGAACACGGTG
ATTGTGCTTGAACAAGAGGAGGAGCTTGATTTGGTGATTGACATCAGCCGTAAAATGGCG
GTCCGGCCTGTGATTGGGCTCCGGGCTAAGCTTAGGACCAAACATTCCGGTCATTTTGGA
TCCACTTCTGGAGAGAAAGGTAAGTTTGGGCTTACAACAACTCAGATCCTTCGTGTGGTG
AGGAAACTCGAAGAATCCGGAATGTTGGATTGTCTTCAGCTGCTGCATTTCCATATTGGA
TCTCAGATCCCTTCAACGGCGTTGCTTGCTGATGGTGTTGGTGAGGCTGCTCAGGTTTAT
TCTGAGTTGGTCCGCCTTGGTGCTGGCATGAAATTCATTGATATTGGCGGTGGGCTTGGA
ATTGACTACGATGGTACCAAATCTTCCGATTCTGATGTTTCCGTCGGATATGGCCTTCAG
GATTACGCCTCTACAGTTGTTCAAGCTGTCCGGTTTGTTTGTGACCGGAAGAACGTGAAG
CATCCGGTGATCTGTAGCGAAAGTGGCAGAGCAATTGTATCTCATCACTCTGTTCTGATA
TTTGAAGCTGTGTCTTCAACTACTACACGTTCTCAAGAGTTGTCCTCGGTGGGTCTCCAG
TCCTTTGTGGAGAAACTTAATGATGATGCTCGTGCTGATTACCGGAATCTATCTGCTGCT
GCTATTCGCGGAGAGTACGATACCTGTATGCTTTATGCCGATCAGTTGAAACAGAGATGT
GTGGAGCAGTTCAAAGACGGTAATTTGGACATTGAACAGCTTGCTGCCGTAGATGCCGTC
TGTGACTTTGTGTCAAAAGCTATTGGAGCTTCTGACCCTGTTCGCACATATCACGTGAAT
CTGTCCGTTTTCACTTCAATTCCTGATTTCTGGGCAATTGACCAACTATTCCCGATTGTT
CCCATCCACAAACTAGATGAACGTCCTTCAGCTCGGGGAATTCTATCCGACTTGACATGT
GACAGTGATGGAAAGATCGATAAATTCATTGGAGGCGAGTCAAGCTTGCCTCTCCATGAA
TTGGGAAGTGGAAATGGCGCGCCTTATTATCTGGGAATGTTTTTAGGCGGGGCATATGAG
GAAGCCCTCGGGGGACTCCATAACCTATTTGGCGGACCTAGCGTCTTGCGTGTGTCACAA
AGCGACAGCCCTCACAGCTTCGCTGTAACATATGCAGTGCCTGGGCCGTCCTGTGCTGAC
GTCCTCCGAGCAATGCAACACGAGCCTGAACTCATGTTCGAGACACTCAAGCACCGTGCG
GAGGAATTCATGCACAAGGAAGAAGAAGAAGAAGAAAATAAGGAAGTGGCATTTGCATCA
TTGGCCAGCAGCCTAAATCAGTCGTTCCACAACATGCCTTATCTTGCGCCACATTCGTCT
TGCTGCTTTAGTGCTGCTGCAAACAGCGGTGGGTATTACTATTGCAATGATGAGAATATT
GTTGGTGTTGGCGCAGAATGTGCAATAGGGGAGGAAGAGTTTTGGCCATACTGCGTTGCT
TAA