Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068569
CDS Infomation

pacid=37480005 polypeptide=PGSC0003DMP400046327 locus=PGSC0003DMG400026666 ID=PGSC0003DMT400068569.v4.03 annot-version=v4.03
Sequence

ATGGCCGATCCTGTAATTGGTGCTACAATTCAAGTTTTGCTCGAAAAATTGCTTTCTCTC
ACTATTGAGGAACTCAGTAGCTCAAGGGACTGCAAGAAAGATTTGGAAATGCTTACACAA
AATGCATCCTTGATCCAAGCTTTCATTCATGATGCTGAAAGACGACAAGTTGACGATCAG
GCTGTGAAACTATGGCTCAAGATGCTTGAGAGATCTGCTGAAAATGCTGAAAATGTGTTT
GACGAATTCAGGTATGAATCTATCAAAAGACAAGTGAATTTCCGAAACAAACCAATGAAA
AAGGTCAGTGATTTCATTTCTCATACAACTTTTAAGAGCAAAATGTCTCGAAAAATCAAC
AACATCAATGAAAAGTTGAGGGCTATCAATAAGTTAGCCAAAGACCTCAGTCTCCAATCA
CTCATGGTTCCTCCTCAGCATATACTACCAATTCGAGAAACAGATTCTGTAGTAGTTCCT
TCGGAGGTTGTTGGTAGAGACAACGATGTTGCAGAAATAAAGAGGAAGATGTTGAACATC
AGAGAGGATGTTGTTCTGTGCACCATTCCCATAGCTGGTATGGGGGGTTTAGGAAAAACA
ACTTTGGCTAAGAGAATTTTCAACGATGAACAGATCGAGAAACACTTTGAAAAGAGAGTT
TGGTTGTGTCTGCCTGAAATGTCAGAAACGAAGAGCTTTCTTCAACTAATCCTCGAATCC
CTGACAAAGAGGAAAGTTGAGGTCCAAAGCAGAGACATAATAGTCAAGACGCTACAAGAT
GAACTGGCAGGAAGAAAGTATTTACTTGTTCTGGATGATTTATGGCGTGTTGACTCTACA
TTGTGGGTAGAGTTTGTCGACACCTTGCGAGGAATAAATACATCCCGAGGAAACTTCATT
CTTGTGACTACTCGTATGGAACAGGTGGCGTCCACAGTAGCAGCAGTAGCTCCTCATAGG
TTGGAAAAATTAGCAAAAGATCATTGTTGGTCCATTTTCAAACAAATAGCATTTGTTGAT
GTGGAAGTTCCAGAGGAAATAGTGATCATGGAGAACAGGATTGTGGAAATGTGTCAAGGT
CTACCATTGGCTGCAAGTGTGTTGGGAGGCCTCTTACGCAACAAGGAAAAACATGAATGG
CAGACAATTCTTGATGGAAACACCCTTGTTGCAGGTGAAGATGATAACGGAGAAAATAGC
ATAAAGAAAATCCTAAAACTCAGCTATGATTATCTACCATCTCCACATCTGAAAAAATGC
TTTGCTTACTTTGCAATGTTTCCAAAAGATTTTGAGTTTGAAAAGGACCAACTAATCCAA
CTCTGGATGGCAGAAGGCTTTCTTCATCCATGTCAAGAGATCACCGTAATGGAAGTCATT
GGGAACAAGTTCTTTCAACTCTTGTTGCGAAATTCCTTGCTACAAGATGTTAAGTTAGAT
GAGCACAACAATATTACACACTGTAAGATGCTTGTGCATGATTTGGCTGGAGATATCTTA
AAATCTAAACTATTTGATCCGAAGGGCGATGGTGGAGAAAATCTTTCTCAAGTGCGATAC
TTTGGATGGGACTCACCAAGTGATCAAATATATAAGATAAATGAGCCAGGAAATTTGTGC
ACACTGTTTTGGAAAAGCAATTATATATTGGAAGATATGCTGTTGAGTTTTAAGTTCTTG
AAAGTTTTAAATTTGTCCAGTTCAGGAATCAAGGAGTTGTCAGCCAAAGTCGGGAAGCTA
ATATACTTGAGATATCTTGATCTCTCAGACACTAACATCACAGCCTTGCCCCACTCCATT
TGTGAGCTCTATAATTTGCAAACATTTAGAGTCAATGGCTGTTATTCACTCGGTGAACTT
CCATTTGAGATGGGAAATATGATAAGTTTGAGACACATATATTGCCATTCTCGGTCTCAG
ATGCCACTTAACATGGGACAATTGACTTGTCTTCAGACCCTACAATATTTCAATGTGGGT
TTAGAGAAAGGTCGTCGAATAGAAGAATTAGGCCGTTTGAAGAACCTTAGAGGTGAATTG
ACAATCAATGAGCTGGAATCAGTCCGTAGTAAAGAAGAAGCGCGAACAGCATATTTACAA
GAGAAATCAAATATTTACAAGCTGGCATATGCATGGTTCCATGATGAACCAGAATCCTGT
GAAACCATTGATGAGCATGTGTTGGATGGTCTTCAACCGCATCGTAACTTGAAAACCTTA
GAAGTGAAGAACTATTTAGGGTTACATAAGGTAGAATGCATCAAACCTACATTTTATGGT
ATTGATGGTAACAATATTGGATCAAGCAGCAATATCCAAGTGTTCCCATCATTGAAAGAA
CTAGTATTGGAGGATATGCGTAGCCTTATTGAGTGGAAGGGAGATGAAGTTGGAGTAAGA
ATGTTTCCTAGGCTTGAGAAGTTGAGGATTAGTAACTGTCCATTGTTAAAAAGTACTCCA
AGTCAATTTGAAATCCTCCGTGAATTAACAATTGAAGAAGTTGACAGTGAAATGCCATTG
TTGAACTTGTGCAGCAACTTGACATCTCTCGTAACGCTTAGTGTCTATGATGTGAAAGAG
CTCACTTTTTTTCCAGATGAGATGCTATGCAACAACGTTTCACTTCAACACCTATGGGTC
TCAGACTGCGGAGAGTTTCAAGAATTGCCACAAAGCTTGTACAATCTCCATTCTCTTAAG
AGCTTAAGGATTAACCTCTGTACCAATTTCAGTTCCTTTCCTGTTCCCACTGGAGAGAAT
TATTTGACTTCCCTCCAAAGTTTTCGGTTATGGAACTGTGATGGATTGACCAGTTTACCA
AGTGGGATGCTAGAGCATTGTCGGTCTCTGAAATCTTTGAAGGTCTTCAACTGTAAAAAC
TTAATTTCCTTCCCTTTACATTTTGGGGAAATGCCTTCACTTTCATATTTGAATATATCA
CAATGTCCCAAATTAATTCGTGTACCCACAGGGGGCCTTCACCGTTTCATTGGGTTACTG
AATTTGGAAATTGGTCCTTTCTCAGAGATGGTGGATTTTGAGGCATTCCAATATATTTTT
GATGGCATTCAGCAGCTATTGTCCCTTCGTAGGTTGTGTGTGTTCGGATATTTGCTCTGG
GATTCTCTTCCCTATCAGTTTATGCAACTCTCTGACCTAAGACAAATCCATATATATGAT
TTCGGAATCGAGGCTCTTCCTCATAGACTTGAGAACCTTACTTCTCTTGAAACATTAGAG
CTAAGGAGGTGCAAACGGCTACAACTTCTGGACTTCTCAGATGCCATGCCCAAATTACAG
CATCTCCGGATCCAGGATTGTCCATTGTTAGAAGCTTTGTCGGATGGGCTCTGCAACCTT
GTTTCTTTGCAAGAGTTAGTTTTATGGACATGCGAGAAACTAGAGCATCTGCCAACTAGA
GATGCCATGCAACGCCTCACCAAATTACGGAACCTAGAAATTAAAGGCTGCCCAAAGTTA
GAAGAAAGTTGCACAAATCAGAGTGGCCCAAACTCCCAATGGTCCAACATTTCCCATATT
CCAAAAATTAAAGTAGGCAGAAGGATAATTCAGGATAGACGGGCAAAGTCTTCGCCAATC
TTCTGCCTCAGTATCCACTGCCACCCTATATCCACCTCTTCTCTCACAATTCGTGCAACT
TCTTCCTATGCTGATGAGCTTGTTAAGATTGCTGTGCTGAGCATTCCCAACAGACCATCT
GCATTGGCAGTGAAGGAAGCAGCCTGGGGTTTGGCTCGCTACGCAGCCATTTCTCAGGAC
AGTAGTTTGGTCCCAATAGTAGAGCCACAAATATTGCTGGATGGTGACCATGGCATTGAC
AGGACTTTTGAGGTTGCGCAAAAAGTTTGGGCCGAGGTTTTTGTTTACCTAGTAGCTGAG
GACAATGTCATGTTTGAGGGTATTCTCCTCAAGCGAAGTATGGTCACTCCTGGTGCTGAA
TGCAAAGACAGAGCCACTCCAGAGCAAGTTGCTGATTATACTCTTAAGCTCCTCCAAAGA
AGAATTCCCCCAGCTGTACCTGGAATCATGGCAAGTTTCCTCATCATTTTAGGCTATTAC
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400046327
PEP Infomation

pacid=37480005 transcript=PGSC0003DMT400068569 locus=PGSC0003DMG400026666 ID=PGSC0003DMT400068569.v4.03 annot-version=v4.03
Sequence

MADPVIGATIQVLLEKLLSLTIEELSSSRDCKKDLEMLTQNASLIQAFIHDAERRQVDDQ
AVKLWLKMLERSAENAENVFDEFRYESIKRQVNFRNKPMKKVSDFISHTTFKSKMSRKIN
NINEKLRAINKLAKDLSLQSLMVPPQHILPIRETDSVVVPSEVVGRDNDVAEIKRKMLNI
REDVVLCTIPIAGMGGLGKTTLAKRIFNDEQIEKHFEKRVWLCLPEMSETKSFLQLILES
LTKRKVEVQSRDIIVKTLQDELAGRKYLLVLDDLWRVDSTLWVEFVDTLRGINTSRGNFI
LVTTRMEQVASTVAAVAPHRLEKLAKDHCWSIFKQIAFVDVEVPEEIVIMENRIVEMCQG
LPLAASVLGGLLRNKEKHEWQTILDGNTLVAGEDDNGENSIKKILKLSYDYLPSPHLKKC
FAYFAMFPKDFEFEKDQLIQLWMAEGFLHPCQEITVMEVIGNKFFQLLLRNSLLQDVKLD
EHNNITHCKMLVHDLAGDILKSKLFDPKGDGGENLSQVRYFGWDSPSDQIYKINEPGNLC
TLFWKSNYILEDMLLSFKFLKVLNLSSSGIKELSAKVGKLIYLRYLDLSDTNITALPHSI
CELYNLQTFRVNGCYSLGELPFEMGNMISLRHIYCHSRSQMPLNMGQLTCLQTLQYFNVG
LEKGRRIEELGRLKNLRGELTINELESVRSKEEARTAYLQEKSNIYKLAYAWFHDEPESC
ETIDEHVLDGLQPHRNLKTLEVKNYLGLHKVECIKPTFYGIDGNNIGSSSNIQVFPSLKE
LVLEDMRSLIEWKGDEVGVRMFPRLEKLRISNCPLLKSTPSQFEILRELTIEEVDSEMPL
LNLCSNLTSLVTLSVYDVKELTFFPDEMLCNNVSLQHLWVSDCGEFQELPQSLYNLHSLK
SLRINLCTNFSSFPVPTGENYLTSLQSFRLWNCDGLTSLPSGMLEHCRSLKSLKVFNCKN
LISFPLHFGEMPSLSYLNISQCPKLIRVPTGGLHRFIGLLNLEIGPFSEMVDFEAFQYIF
DGIQQLLSLRRLCVFGYLLWDSLPYQFMQLSDLRQIHIYDFGIEALPHRLENLTSLETLE
LRRCKRLQLLDFSDAMPKLQHLRIQDCPLLEALSDGLCNLVSLQELVLWTCEKLEHLPTR
DAMQRLTKLRNLEIKGCPKLEESCTNQSGPNSQWSNISHIPKIKVGRRIIQDRRAKSSPI
FCLSIHCHPISTSSLTIRATSSYADELVKIAVLSIPNRPSALAVKEAAWGLARYAAISQD
SSLVPIVEPQILLDGDHGIDRTFEVAQKVWAEVFVYLVAEDNVMFEGILLKRSMVTPGAE
CKDRATPEQVADYTLKLLQRRIPPAVPGIMASFLIILGYY*

Transcript Sequence

Transcript ID

PGSC0003DMT400068569
Transcript Infomation

pacid=37480005 locus=PGSC0003DMG400026666 ID=PGSC0003DMT400068569.v4.03 annot-version=v4.03
Sequence

ATGGCCGATCCTGTAATTGGTGCTACAATTCAAGTTTTGCTCGAAAAATTGCTTTCTCTC
ACTATTGAGGAACTCAGTAGCTCAAGGGACTGCAAGAAAGATTTGGAAATGCTTACACAA
AATGCATCCTTGATCCAAGCTTTCATTCATGATGCTGAAAGACGACAAGTTGACGATCAG
GCTGTGAAACTATGGCTCAAGATGCTTGAGAGATCTGCTGAAAATGCTGAAAATGTGTTT
GACGAATTCAGGTATGAATCTATCAAAAGACAAGTGAATTTCCGAAACAAACCAATGAAA
AAGGTCAGTGATTTCATTTCTCATACAACTTTTAAGAGCAAAATGTCTCGAAAAATCAAC
AACATCAATGAAAAGTTGAGGGCTATCAATAAGTTAGCCAAAGACCTCAGTCTCCAATCA
CTCATGGTTCCTCCTCAGCATATACTACCAATTCGAGAAACAGATTCTGTAGTAGTTCCT
TCGGAGGTTGTTGGTAGAGACAACGATGTTGCAGAAATAAAGAGGAAGATGTTGAACATC
AGAGAGGATGTTGTTCTGTGCACCATTCCCATAGCTGGTATGGGGGGTTTAGGAAAAACA
ACTTTGGCTAAGAGAATTTTCAACGATGAACAGATCGAGAAACACTTTGAAAAGAGAGTT
TGGTTGTGTCTGCCTGAAATGTCAGAAACGAAGAGCTTTCTTCAACTAATCCTCGAATCC
CTGACAAAGAGGAAAGTTGAGGTCCAAAGCAGAGACATAATAGTCAAGACGCTACAAGAT
GAACTGGCAGGAAGAAAGTATTTACTTGTTCTGGATGATTTATGGCGTGTTGACTCTACA
TTGTGGGTAGAGTTTGTCGACACCTTGCGAGGAATAAATACATCCCGAGGAAACTTCATT
CTTGTGACTACTCGTATGGAACAGGTGGCGTCCACAGTAGCAGCAGTAGCTCCTCATAGG
TTGGAAAAATTAGCAAAAGATCATTGTTGGTCCATTTTCAAACAAATAGCATTTGTTGAT
GTGGAAGTTCCAGAGGAAATAGTGATCATGGAGAACAGGATTGTGGAAATGTGTCAAGGT
CTACCATTGGCTGCAAGTGTGTTGGGAGGCCTCTTACGCAACAAGGAAAAACATGAATGG
CAGACAATTCTTGATGGAAACACCCTTGTTGCAGGTGAAGATGATAACGGAGAAAATAGC
ATAAAGAAAATCCTAAAACTCAGCTATGATTATCTACCATCTCCACATCTGAAAAAATGC
TTTGCTTACTTTGCAATGTTTCCAAAAGATTTTGAGTTTGAAAAGGACCAACTAATCCAA
CTCTGGATGGCAGAAGGCTTTCTTCATCCATGTCAAGAGATCACCGTAATGGAAGTCATT
GGGAACAAGTTCTTTCAACTCTTGTTGCGAAATTCCTTGCTACAAGATGTTAAGTTAGAT
GAGCACAACAATATTACACACTGTAAGATGCTTGTGCATGATTTGGCTGGAGATATCTTA
AAATCTAAACTATTTGATCCGAAGGGCGATGGTGGAGAAAATCTTTCTCAAGTGCGATAC
TTTGGATGGGACTCACCAAGTGATCAAATATATAAGATAAATGAGCCAGGAAATTTGTGC
ACACTGTTTTGGAAAAGCAATTATATATTGGAAGATATGCTGTTGAGTTTTAAGTTCTTG
AAAGTTTTAAATTTGTCCAGTTCAGGAATCAAGGAGTTGTCAGCCAAAGTCGGGAAGCTA
ATATACTTGAGATATCTTGATCTCTCAGACACTAACATCACAGCCTTGCCCCACTCCATT
TGTGAGCTCTATAATTTGCAAACATTTAGAGTCAATGGCTGTTATTCACTCGGTGAACTT
CCATTTGAGATGGGAAATATGATAAGTTTGAGACACATATATTGCCATTCTCGGTCTCAG
ATGCCACTTAACATGGGACAATTGACTTGTCTTCAGACCCTACAATATTTCAATGTGGGT
TTAGAGAAAGGTCGTCGAATAGAAGAATTAGGCCGTTTGAAGAACCTTAGAGGTGAATTG
ACAATCAATGAGCTGGAATCAGTCCGTAGTAAAGAAGAAGCGCGAACAGCATATTTACAA
GAGAAATCAAATATTTACAAGCTGGCATATGCATGGTTCCATGATGAACCAGAATCCTGT
GAAACCATTGATGAGCATGTGTTGGATGGTCTTCAACCGCATCGTAACTTGAAAACCTTA
GAAGTGAAGAACTATTTAGGGTTACATAAGGTAGAATGCATCAAACCTACATTTTATGGT
ATTGATGGTAACAATATTGGATCAAGCAGCAATATCCAAGTGTTCCCATCATTGAAAGAA
CTAGTATTGGAGGATATGCGTAGCCTTATTGAGTGGAAGGGAGATGAAGTTGGAGTAAGA
ATGTTTCCTAGGCTTGAGAAGTTGAGGATTAGTAACTGTCCATTGTTAAAAAGTACTCCA
AGTCAATTTGAAATCCTCCGTGAATTAACAATTGAAGAAGTTGACAGTGAAATGCCATTG
TTGAACTTGTGCAGCAACTTGACATCTCTCGTAACGCTTAGTGTCTATGATGTGAAAGAG
CTCACTTTTTTTCCAGATGAGATGCTATGCAACAACGTTTCACTTCAACACCTATGGGTC
TCAGACTGCGGAGAGTTTCAAGAATTGCCACAAAGCTTGTACAATCTCCATTCTCTTAAG
AGCTTAAGGATTAACCTCTGTACCAATTTCAGTTCCTTTCCTGTTCCCACTGGAGAGAAT
TATTTGACTTCCCTCCAAAGTTTTCGGTTATGGAACTGTGATGGATTGACCAGTTTACCA
AGTGGGATGCTAGAGCATTGTCGGTCTCTGAAATCTTTGAAGGTCTTCAACTGTAAAAAC
TTAATTTCCTTCCCTTTACATTTTGGGGAAATGCCTTCACTTTCATATTTGAATATATCA
CAATGTCCCAAATTAATTCGTGTACCCACAGGGGGCCTTCACCGTTTCATTGGGTTACTG
AATTTGGAAATTGGTCCTTTCTCAGAGATGGTGGATTTTGAGGCATTCCAATATATTTTT
GATGGCATTCAGCAGCTATTGTCCCTTCGTAGGTTGTGTGTGTTCGGATATTTGCTCTGG
GATTCTCTTCCCTATCAGTTTATGCAACTCTCTGACCTAAGACAAATCCATATATATGAT
TTCGGAATCGAGGCTCTTCCTCATAGACTTGAGAACCTTACTTCTCTTGAAACATTAGAG
CTAAGGAGGTGCAAACGGCTACAACTTCTGGACTTCTCAGATGCCATGCCCAAATTACAG
CATCTCCGGATCCAGGATTGTCCATTGTTAGAAGCTTTGTCGGATGGGCTCTGCAACCTT
GTTTCTTTGCAAGAGTTAGTTTTATGGACATGCGAGAAACTAGAGCATCTGCCAACTAGA
GATGCCATGCAACGCCTCACCAAATTACGGAACCTAGAAATTAAAGGCTGCCCAAAGTTA
GAAGAAAGTTGCACAAATCAGAGTGGCCCAAACTCCCAATGGTCCAACATTTCCCATATT
CCAAAAATTAAAGTAGGCAGAAGGATAATTCAGGATAGACGGGCAAAGTCTTCGCCAATC
TTCTGCCTCAGTATCCACTGCCACCCTATATCCACCTCTTCTCTCACAATTCGTGCAACT
TCTTCCTATGCTGATGAGCTTGTTAAGATTGCTGTGCTGAGCATTCCCAACAGACCATCT
GCATTGGCAGTGAAGGAAGCAGCCTGGGGTTTGGCTCGCTACGCAGCCATTTCTCAGGAC
AGTAGTTTGGTCCCAATAGTAGAGCCACAAATATTGCTGGATGGTGACCATGGCATTGAC
AGGACTTTTGAGGTTGCGCAAAAAGTTTGGGCCGAGGTTTTTGTTTACCTAGTAGCTGAG
GACAATGTCATGTTTGAGGGTATTCTCCTCAAGCGAAGTATGGTCACTCCTGGTGCTGAA
TGCAAAGACAGAGCCACTCCAGAGCAAGTTGCTGATTATACTCTTAAGCTCCTCCAAAGA
AGAATTCCCCCAGCTGTACCTGGAATCATGGCAAGTTTCCTCATCATTTTAGGCTATTAC
TAA