Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068513
CDS Infomation

pacid=37455312 polypeptide=PGSC0003DMP400046287 locus=PGSC0003DMG400026647 ID=PGSC0003DMT400068513.v4.03 annot-version=v4.03
Sequence

ATGGACAATTCCTATAGCCTAGTTATTCTTGCATTGATCTTTTGCCCTATTCTTGTGAGA
GCTCAATCTTTTGATTTTGCTTACAATGGATTCAATAACTCAAATATCATTAGAGATGGA
ATTGCAATTATCAATCCAAATGGTGCACTTAAGCTCACTAATAGATCACAAAATGTTATA
GGTCATGCTTTCCACCCCAATCCTGTACCAATTTTCAACTCCAGTACTAAAAATGTTACT
TCATTTAGTACATACTTCGTCTTCGCCATTGTCTCTCTAGAGAAAACCTCTGGTGGCTTT
GGATTTGCTTTCACCTTATCTCCATCCCCGGGTTTTCCGGGTGCTAAGGGAGCTCATTTT
CTTGGAGTCGTCAACAGTAGTAACGATGGCAATGATACTAACCACATCTTTATGGTTGAA
TTTGACACTGTGGATGGTCATGACGAAGGTGTGGACACAGGTGGAAATCAAATTGGGATT
AACAGAAATGGCATGAGGCATATCACGTCAGAATCAGCTGATTACTATAATAATGCTACT
TCTGAAACAAAACCAGTAGATCTACAAAACAGAGAATCAATTCAGGCTTGGATCGATTAT
GATGGAATGAGCAAAGTGGTAAATGTAACTATATCTCCCATAAAAGTTCCAAAGCCAATT
ATACCTCTGATCAGTCGGGATGTAGATTTATCTCCTGTGTTGAAAGAGACTACGTATGCT
GGTTTCTCAGCAGCCACGGGAGATAAAGCGAGCTCTCATTACATCTTGGGTTGGAGTTTT
CGGTTGAATGGAGCTGCTGATCCTTTAGATCTTGAAAAGCTACCAGTTGCCCCACCTGAA
GTGGTAACATCCTCCAAGAATTCCCATCTCAAAAGGGCCTTGATCGGAACATTTTGCTCC
GTGGTTATCCTGCTCCTTGGAGCATTTTATATCTATAGAAGGATGAGGCAGCATGAAGTT
CTAGAGGACTGGGAGCTGGATTGTCCTCACAGGTTCCGATTTAGAGATCTTTACAAGGCA
ACTAAGGGATTCAAGGAAAGTGAACTAATTGGAGTTGGAGGATTTGGTGCTGTTTACAAG
GGTGTTTTGCCTACTAATGGAGCCGAGGTTGCAGTGAAGAAGATATCGAGCAATTCTCTC
CAAGGAATAAGAGAATTTGCAGCGGAGATCGAAAGCTTAGGCAGGTTAAGGCACAAACAC
TTGATCAACCTACAAGGCTGGTGCAAGAACAAGAATGATCTTCTCCTAGTGTATGACTTT
GTCCCAAATGGAAGTCTTGATTCATTACTTTACAGGCAGAAAAGGGACATTGTTCTAACA
TGGGAACAGAGATTTAACATCATCAAAGGGATTGCTGCAGGGCTTCTTTACTTGCATGAA
GAATGGGAACAAGTGGTAATACATCGCGATGTGAAGAGCAGTAACGTCCTAATTGATGGT
GAAATGAATGGTCGATTAGGGGATTTTGGGCTAGCAAGATTATACGACCATGGCAAGAAT
TCACACACAACAAATGTTGTTGGCACAATAGGGTACATTGCACCAGAATTGACACGGACA
GGGAAGGCCTCAACGAGCACGGATGTGTATGCATATGGTGTACTACTTCTTGAAGTAGCT
AGTGGAAGACCTCCTATTGTCTATGAACCAGGGAAAGGAGCTTTAGTACTAGCTGATTGG
GTGATAGAATGTTTACAACTAGGTAATATTCTTGATGCAGTTGATCAAAGGTTGAATTCA
GTCTATGTAGATAAAGAGGTTCAAATGATTTTGAGACTTGGGCTTGTTTGTTCACACCCA
AGACCAGAAGCTAGGCCAACAATGAGACAAGTAATGAAGTACCTCAATGGAGATGAATCA
CTTCCAGTTTTTGAGCAGCAGTTGAGCTGTATTGGATCTGGTAGGGTTGATGAAATCACA
GCCAAGTTCTTGGAAGTATTTTCTACTGATACAATCAATATATCACATCGTTCGCTATCC
GTCGGACAGACATCATCTAGTTCACTCCATTCTGGTAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400046287
PEP Infomation

pacid=37455312 transcript=PGSC0003DMT400068513 locus=PGSC0003DMG400026647 ID=PGSC0003DMT400068513.v4.03 annot-version=v4.03
Sequence

MDNSYSLVILALIFCPILVRAQSFDFAYNGFNNSNIIRDGIAIINPNGALKLTNRSQNVI
GHAFHPNPVPIFNSSTKNVTSFSTYFVFAIVSLEKTSGGFGFAFTLSPSPGFPGAKGAHF
LGVVNSSNDGNDTNHIFMVEFDTVDGHDEGVDTGGNQIGINRNGMRHITSESADYYNNAT
SETKPVDLQNRESIQAWIDYDGMSKVVNVTISPIKVPKPIIPLISRDVDLSPVLKETTYA
GFSAATGDKASSHYILGWSFRLNGAADPLDLEKLPVAPPEVVTSSKNSHLKRALIGTFCS
VVILLLGAFYIYRRMRQHEVLEDWELDCPHRFRFRDLYKATKGFKESELIGVGGFGAVYK
GVLPTNGAEVAVKKISSNSLQGIREFAAEIESLGRLRHKHLINLQGWCKNKNDLLLVYDF
VPNGSLDSLLYRQKRDIVLTWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSSNVLIDG
EMNGRLGDFGLARLYDHGKNSHTTNVVGTIGYIAPELTRTGKASTSTDVYAYGVLLLEVA
SGRPPIVYEPGKGALVLADWVIECLQLGNILDAVDQRLNSVYVDKEVQMILRLGLVCSHP
RPEARPTMRQVMKYLNGDESLPVFEQQLSCIGSGRVDEITAKFLEVFSTDTINISHRSLS
VGQTSSSSLHSGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400068513
Transcript Infomation

pacid=37455312 locus=PGSC0003DMG400026647 ID=PGSC0003DMT400068513.v4.03 annot-version=v4.03
Sequence

ATGGACAATTCCTATAGCCTAGTTATTCTTGCATTGATCTTTTGCCCTATTCTTGTGAGA
GCTCAATCTTTTGATTTTGCTTACAATGGATTCAATAACTCAAATATCATTAGAGATGGA
ATTGCAATTATCAATCCAAATGGTGCACTTAAGCTCACTAATAGATCACAAAATGTTATA
GGTCATGCTTTCCACCCCAATCCTGTACCAATTTTCAACTCCAGTACTAAAAATGTTACT
TCATTTAGTACATACTTCGTCTTCGCCATTGTCTCTCTAGAGAAAACCTCTGGTGGCTTT
GGATTTGCTTTCACCTTATCTCCATCCCCGGGTTTTCCGGGTGCTAAGGGAGCTCATTTT
CTTGGAGTCGTCAACAGTAGTAACGATGGCAATGATACTAACCACATCTTTATGGTTGAA
TTTGACACTGTGGATGGTCATGACGAAGGTGTGGACACAGGTGGAAATCAAATTGGGATT
AACAGAAATGGCATGAGGCATATCACGTCAGAATCAGCTGATTACTATAATAATGCTACT
TCTGAAACAAAACCAGTAGATCTACAAAACAGAGAATCAATTCAGGCTTGGATCGATTAT
GATGGAATGAGCAAAGTGGTAAATGTAACTATATCTCCCATAAAAGTTCCAAAGCCAATT
ATACCTCTGATCAGTCGGGATGTAGATTTATCTCCTGTGTTGAAAGAGACTACGTATGCT
GGTTTCTCAGCAGCCACGGGAGATAAAGCGAGCTCTCATTACATCTTGGGTTGGAGTTTT
CGGTTGAATGGAGCTGCTGATCCTTTAGATCTTGAAAAGCTACCAGTTGCCCCACCTGAA
GTGGTAACATCCTCCAAGAATTCCCATCTCAAAAGGGCCTTGATCGGAACATTTTGCTCC
GTGGTTATCCTGCTCCTTGGAGCATTTTATATCTATAGAAGGATGAGGCAGCATGAAGTT
CTAGAGGACTGGGAGCTGGATTGTCCTCACAGGTTCCGATTTAGAGATCTTTACAAGGCA
ACTAAGGGATTCAAGGAAAGTGAACTAATTGGAGTTGGAGGATTTGGTGCTGTTTACAAG
GGTGTTTTGCCTACTAATGGAGCCGAGGTTGCAGTGAAGAAGATATCGAGCAATTCTCTC
CAAGGAATAAGAGAATTTGCAGCGGAGATCGAAAGCTTAGGCAGGTTAAGGCACAAACAC
TTGATCAACCTACAAGGCTGGTGCAAGAACAAGAATGATCTTCTCCTAGTGTATGACTTT
GTCCCAAATGGAAGTCTTGATTCATTACTTTACAGGCAGAAAAGGGACATTGTTCTAACA
TGGGAACAGAGATTTAACATCATCAAAGGGATTGCTGCAGGGCTTCTTTACTTGCATGAA
GAATGGGAACAAGTGGTAATACATCGCGATGTGAAGAGCAGTAACGTCCTAATTGATGGT
GAAATGAATGGTCGATTAGGGGATTTTGGGCTAGCAAGATTATACGACCATGGCAAGAAT
TCACACACAACAAATGTTGTTGGCACAATAGGGTACATTGCACCAGAATTGACACGGACA
GGGAAGGCCTCAACGAGCACGGATGTGTATGCATATGGTGTACTACTTCTTGAAGTAGCT
AGTGGAAGACCTCCTATTGTCTATGAACCAGGGAAAGGAGCTTTAGTACTAGCTGATTGG
GTGATAGAATGTTTACAACTAGGTAATATTCTTGATGCAGTTGATCAAAGGTTGAATTCA
GTCTATGTAGATAAAGAGGTTCAAATGATTTTGAGACTTGGGCTTGTTTGTTCACACCCA
AGACCAGAAGCTAGGCCAACAATGAGACAAGTAATGAAGTACCTCAATGGAGATGAATCA
CTTCCAGTTTTTGAGCAGCAGTTGAGCTGTATTGGATCTGGTAGGGTTGATGAAATCACA
GCCAAGTTCTTGGAAGTATTTTCTACTGATACAATCAATATATCACATCGTTCGCTATCC
GTCGGACAGACATCATCTAGTTCACTCCATTCTGGTAGATGA