Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068494
CDS Infomation

pacid=37478712 polypeptide=PGSC0003DMP400046274 locus=PGSC0003DMG400026636 ID=PGSC0003DMT400068494.v4.03 annot-version=v4.03
Sequence

ATGAAAAGGACACCTGAATCAGGAAAACCACTAGCCGAGAACCGTATTGAGGCTGAGGTG
ACAAATATTTACCCAACCTTTAAAAAAGAGGTGGGAACTATATCCGATGTCCATGACTTT
CTGGAGATGGACTTCACTGTTCCTCTTCAAACATGGAAAGGAAACCACTCATATCAGGAG
CAAGAGGAACTTATGCCTAATGCTGGTACAATCAAGCGATGTGATGACTCACTTGAAGAT
AGTGGCTTTATGACATTCTATGGAGCAAGTCATCCTCCAGAACCTGTTGATACCGACCTA
ATGAAACCAGTCTATGTACCAATTGGTCCTAATAAAGTAGACGGTAAATGCCTATTGAAA
AACATGTCTCTGAAGGATTCTTCCCTGGATGATATTTCAATCAAGGTTCTTAACATGAAA
CCTAGTTCATTTCTTCTTTCACCTGCAGAGAGATGGGCTGAAAATCCAAATGATCTTGGT
GTAGTATCCTCTCCATTTATGGTTCCTCGTCCATCTCAAAATATGTTAGCAAGTCTACCC
CCTGATTCTGAAGAAAAAGAATGTCTTTGGGATGCATCATTATCACCAAGCAGCAATGTC
AGTCCATATAGTAGCATTGATAGTGCTGGTGTTGGCACAGCTATGAGCATTCCTAACAGC
TGCACAAGAACATATAGGAGTGATCGGATGCTGAGTGAAAGCTTGCTTATTATGGATGGA
AACTGTGAGGGCACTAAACTGATTATTCAAGGGGATTCACTAGAAAGTGCTAAAACTAGC
TTTAGCAGGGAAAGTGATAGCAGTGAACTTAGTGATGATAGTAACTGGAGTAACATTACC
GGCAGTGCCAATAAGCCGCACAAAGGGAATGATCCCAGATGCAAGGCTATTCTTGCAATA
CGGGCACGTGATGGTATATTAGGCATGAGTCACTTTAGGTTAGTGAAAAGACTTGGTTGT
GGTGACATTGGCACTGTTTATCTTTCAGAGCTAAATGGGACTTGCTGCAATTTTGCAATG
AAAGTGATGGATAAGGCATCGCTTGCAAGTAGGAAAAAATTAACCCGTTCTCGAACAGAA
AAAGAAATCCTTCAGCTGTTAGATCACCCATTCTTACCAACCTTGTATACTCATTTTGAA
ACTGACAGATTTTCATGTTTAGTCATGGAATATTGCCCAGGAGGAGATCTACATACTCTA
CGACAAAGACAGCCTGGGAAGCATTTTTCAGAATACTCTGCAAGGTTTTATGCTGCAGAA
GTTTTATTGGCTCTCGAATATCTTCACATGCTAGGTGTACTTTACCGAGACTTAAAGCCT
GAAAATGTTCTAGTGCGTGATGATGGCCACATCATGCTTTCGGATTTTGATCTATCCCTG
AAATGTTCAGTTTCACCTATGGTCATAAGGACATCATCTAATGATCCCTCTAAACGAGGA
GCTGCATTATGTGTGCAGCCAGCCTGTATTGCTCCCACATCTACATGCATTCAGCCAACA
TGCTTCCTCCCCCGAATATTTTCTCAAAAGAGCAAAAAGATATCACAAAAGCCTCGAACT
GAGCCTGGTTTTCCTGCTAATGCTATGCCTGAGCTAGTTGCAGAACCTACTGCAGCACGG
TCAATGTCATTTGTTGGGACTCATGAATACTTAGCCCCTGAAATTATCAAGGGAGAAGGC
CATGGCAATGCAGTTGATTGGTGGACATTTGGCATATTTCTGTATGAATTACTATATGGT
AAAACCCCATTCAAGGGATCAGGAAACAGGGCAACTATTTTCAATGTAGTGGGACAGCAG
CTCAAGTTTCCAGATTCTCCTGCAACGAGTAATGCCAGCCGCAATCTTATTCAAGGATTG
CTCATTAAAGAGCCTCAACACCGTCTCGGGGTGAAAAGAGGAGCAAGTGAGTTAAAGCAA
CACCCTTTCTTTGAAGGTGTTAATTGGGCACTGATTCGTTCCAGTACCCCACCTGAAGTG
CCAAGACAGGTTAAAGTAGAGCTTCCACGCAAGTTTAAGCAAGTGAACCCTGTTGAAGTT
TGCAGTAAAAGAAATGCAGGAACAAATGTGAATTCTGGGGGTAATAATTATCTTGACATT
GAGTTCTTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046274
PEP Infomation

pacid=37478712 transcript=PGSC0003DMT400068494 locus=PGSC0003DMG400026636 ID=PGSC0003DMT400068494.v4.03 annot-version=v4.03
Sequence

MKRTPESGKPLAENRIEAEVTNIYPTFKKEVGTISDVHDFLEMDFTVPLQTWKGNHSYQE
QEELMPNAGTIKRCDDSLEDSGFMTFYGASHPPEPVDTDLMKPVYVPIGPNKVDGKCLLK
NMSLKDSSLDDISIKVLNMKPSSFLLSPAERWAENPNDLGVVSSPFMVPRPSQNMLASLP
PDSEEKECLWDASLSPSSNVSPYSSIDSAGVGTAMSIPNSCTRTYRSDRMLSESLLIMDG
NCEGTKLIIQGDSLESAKTSFSRESDSSELSDDSNWSNITGSANKPHKGNDPRCKAILAI
RARDGILGMSHFRLVKRLGCGDIGTVYLSELNGTCCNFAMKVMDKASLASRKKLTRSRTE
KEILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYSARFYAAE
VLLALEYLHMLGVLYRDLKPENVLVRDDGHIMLSDFDLSLKCSVSPMVIRTSSNDPSKRG
AALCVQPACIAPTSTCIQPTCFLPRIFSQKSKKISQKPRTEPGFPANAMPELVAEPTAAR
SMSFVGTHEYLAPEIIKGEGHGNAVDWWTFGIFLYELLYGKTPFKGSGNRATIFNVVGQQ
LKFPDSPATSNASRNLIQGLLIKEPQHRLGVKRGASELKQHPFFEGVNWALIRSSTPPEV
PRQVKVELPRKFKQVNPVEVCSKRNAGTNVNSGGNNYLDIEFF*

Transcript Sequence

Transcript ID

PGSC0003DMT400068494
Transcript Infomation

pacid=37478712 locus=PGSC0003DMG400026636 ID=PGSC0003DMT400068494.v4.03 annot-version=v4.03
Sequence

ATGAAAAGGACACCTGAATCAGGAAAACCACTAGCCGAGAACCGTATTGAGGCTGAGGTG
ACAAATATTTACCCAACCTTTAAAAAAGAGGTGGGAACTATATCCGATGTCCATGACTTT
CTGGAGATGGACTTCACTGTTCCTCTTCAAACATGGAAAGGAAACCACTCATATCAGGAG
CAAGAGGAACTTATGCCTAATGCTGGTACAATCAAGCGATGTGATGACTCACTTGAAGAT
AGTGGCTTTATGACATTCTATGGAGCAAGTCATCCTCCAGAACCTGTTGATACCGACCTA
ATGAAACCAGTCTATGTACCAATTGGTCCTAATAAAGTAGACGGTAAATGCCTATTGAAA
AACATGTCTCTGAAGGATTCTTCCCTGGATGATATTTCAATCAAGGTTCTTAACATGAAA
CCTAGTTCATTTCTTCTTTCACCTGCAGAGAGATGGGCTGAAAATCCAAATGATCTTGGT
GTAGTATCCTCTCCATTTATGGTTCCTCGTCCATCTCAAAATATGTTAGCAAGTCTACCC
CCTGATTCTGAAGAAAAAGAATGTCTTTGGGATGCATCATTATCACCAAGCAGCAATGTC
AGTCCATATAGTAGCATTGATAGTGCTGGTGTTGGCACAGCTATGAGCATTCCTAACAGC
TGCACAAGAACATATAGGAGTGATCGGATGCTGAGTGAAAGCTTGCTTATTATGGATGGA
AACTGTGAGGGCACTAAACTGATTATTCAAGGGGATTCACTAGAAAGTGCTAAAACTAGC
TTTAGCAGGGAAAGTGATAGCAGTGAACTTAGTGATGATAGTAACTGGAGTAACATTACC
GGCAGTGCCAATAAGCCGCACAAAGGGAATGATCCCAGATGCAAGGCTATTCTTGCAATA
CGGGCACGTGATGGTATATTAGGCATGAGTCACTTTAGGTTAGTGAAAAGACTTGGTTGT
GGTGACATTGGCACTGTTTATCTTTCAGAGCTAAATGGGACTTGCTGCAATTTTGCAATG
AAAGTGATGGATAAGGCATCGCTTGCAAGTAGGAAAAAATTAACCCGTTCTCGAACAGAA
AAAGAAATCCTTCAGCTGTTAGATCACCCATTCTTACCAACCTTGTATACTCATTTTGAA
ACTGACAGATTTTCATGTTTAGTCATGGAATATTGCCCAGGAGGAGATCTACATACTCTA
CGACAAAGACAGCCTGGGAAGCATTTTTCAGAATACTCTGCAAGGTTTTATGCTGCAGAA
GTTTTATTGGCTCTCGAATATCTTCACATGCTAGGTGTACTTTACCGAGACTTAAAGCCT
GAAAATGTTCTAGTGCGTGATGATGGCCACATCATGCTTTCGGATTTTGATCTATCCCTG
AAATGTTCAGTTTCACCTATGGTCATAAGGACATCATCTAATGATCCCTCTAAACGAGGA
GCTGCATTATGTGTGCAGCCAGCCTGTATTGCTCCCACATCTACATGCATTCAGCCAACA
TGCTTCCTCCCCCGAATATTTTCTCAAAAGAGCAAAAAGATATCACAAAAGCCTCGAACT
GAGCCTGGTTTTCCTGCTAATGCTATGCCTGAGCTAGTTGCAGAACCTACTGCAGCACGG
TCAATGTCATTTGTTGGGACTCATGAATACTTAGCCCCTGAAATTATCAAGGGAGAAGGC
CATGGCAATGCAGTTGATTGGTGGACATTTGGCATATTTCTGTATGAATTACTATATGGT
AAAACCCCATTCAAGGGATCAGGAAACAGGGCAACTATTTTCAATGTAGTGGGACAGCAG
CTCAAGTTTCCAGATTCTCCTGCAACGAGTAATGCCAGCCGCAATCTTATTCAAGGATTG
CTCATTAAAGAGCCTCAACACCGTCTCGGGGTGAAAAGAGGAGCAAGTGAGTTAAAGCAA
CACCCTTTCTTTGAAGGTGTTAATTGGGCACTGATTCGTTCCAGTACCCCACCTGAAGTG
CCAAGACAGGTTAAAGTAGAGCTTCCACGCAAGTTTAAGCAAGTGAACCCTGTTGAAGTT
TGCAGTAAAAGAAATGCAGGAACAAATGTGAATTCTGGGGGTAATAATTATCTTGACATT
GAGTTCTTTTAG