Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068437
CDS Infomation

pacid=37455237 polypeptide=PGSC0003DMP400046237 locus=PGSC0003DMG400026613 ID=PGSC0003DMT400068437.v4.03 annot-version=v4.03
Sequence

ATGGAAGCATCAATTCTGCAACTACTTCTTCTACTATCACTTACATCTTGCACAATTCTC
TTTTACAAAATCAGAGGCCGACGACGATGGCGTTGGCCTCCATCTCCACCATCTCTCCCT
ATAATCGGTCACCTCCATCTCCTCACCGACATGCCCCACCATACCTTCTTCCATCTCTCT
CAAAAACTCGGCCCAATAATCCACCTTCAACTCGGCCAAATCCCAACTCTAATCATCTCT
TCTCCTCGACTAGCTGAACTCATCCTCAAAACAAATGACCATATCTTCTGCAGCCGCCCA
CAAATCATTGCAGCTCAGTACCTCTCCTTCGGTTGCTCTGATATCACTTTTTCACCTTAC
GGTCCTTACTGGCGCCAAGCTAGAAAAATCTGCGTAACGGAATTACTCAGTTCAAAACGA
GTTAACTCGTTTCAATTCATACGAAATGAGGAAATTAACCGTATGATACAATTGATTTCG
TCTCATTTTGATTCCGAGTTATCGTCTGAACTAGATCTGAGTCAGGTTTTCTTTGCTCTT
GCGAATGATATTTTGTGTAGAGTGGCGTTTGGGAAGAGATTTATTGATGATAGATTGAAA
GATAAGGATTTAGTGAGTGTATTGACGGAGACACAGGCGTTGTTAGCGGGGTTTTGTTTA
GGGGATTTTTTTCCAGATTGGGAATGGGTTAATTGGTTGAGTGGGATGAAGAAGAGATTG
ATGAATAATTTGAAGGATTTGAGAGAAGTTTGTGATGAGATTATAGACGAGCATTTGATG
AAAAAGAGAGATGATGATCAAAACGGCGATGGTTCAGAAGACTTTGTTGATGTATTGCTG
AGGGTTCAGAAAAGAGATGATCTACAAGTGCCCATCACCGATGACAACCTCAAAGCTCTT
ATTCTGGATATGTTTGTGGCTGGAACAGATACATCAGCAGCCACATTAGAATGGACAATG
ACAGAGTTGGCTAGGCATCCAAGTGTTATGAAAAAGGCACAAGATGAAGTAAGAAAAATT
GCAGCTAATAAAGGAAAGGTAGAAGAATTTGATCTTCAACATCTACACTATATGAAAGCA
GTAATAAAGGAGACTATGCGACTGCATCCCCCTGTCCCTCTTCTCGTACCTCGTGAATCC
ATCGAAAAATGTACTCTCGATGACTATGAAATACCTGCAAAAACTAGAGTCTTGATCAAC
ACCTATGCCATTGGAAGAGATCCAGAGTACTGGAACAATCCTCTTGACTACAATCCCGAA
AGGTTTATGGAAAAGGATATCGATTTTAGGGGACAAGATTTTAGGTTTCTACCGTTTGGA
GGAGGGAGAAGAGGTTGTCCAGGTTACGCTCTTGGATTAGCTACAATTGAGTTATCATTG
GCTCGTTTGTTGTATCACTTTGATTGGAAACTACCTACTGGAGTAGAAGCTCAAGATGTC
GACTTGTCAGAGATATTTGGATTGGCTACTAGAAAAAGAGTGGCTCTGAAGCTTGTTCCA
ACCATCAACAAGTTATACCTACTCTCTGGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400046237
PEP Infomation

pacid=37455237 transcript=PGSC0003DMT400068437 locus=PGSC0003DMG400026613 ID=PGSC0003DMT400068437.v4.03 annot-version=v4.03
Sequence

MEASILQLLLLLSLTSCTILFYKIRGRRRWRWPPSPPSLPIIGHLHLLTDMPHHTFFHLS
QKLGPIIHLQLGQIPTLIISSPRLAELILKTNDHIFCSRPQIIAAQYLSFGCSDITFSPY
GPYWRQARKICVTELLSSKRVNSFQFIRNEEINRMIQLISSHFDSELSSELDLSQVFFAL
ANDILCRVAFGKRFIDDRLKDKDLVSVLTETQALLAGFCLGDFFPDWEWVNWLSGMKKRL
MNNLKDLREVCDEIIDEHLMKKRDDDQNGDGSEDFVDVLLRVQKRDDLQVPITDDNLKAL
ILDMFVAGTDTSAATLEWTMTELARHPSVMKKAQDEVRKIAANKGKVEEFDLQHLHYMKA
VIKETMRLHPPVPLLVPRESIEKCTLDDYEIPAKTRVLINTYAIGRDPEYWNNPLDYNPE
RFMEKDIDFRGQDFRFLPFGGGRRGCPGYALGLATIELSLARLLYHFDWKLPTGVEAQDV
DLSEIFGLATRKRVALKLVPTINKLYLLSG*

Transcript Sequence

Transcript ID

PGSC0003DMT400068437
Transcript Infomation

pacid=37455237 locus=PGSC0003DMG400026613 ID=PGSC0003DMT400068437.v4.03 annot-version=v4.03
Sequence

ATGGAAGCATCAATTCTGCAACTACTTCTTCTACTATCACTTACATCTTGCACAATTCTC
TTTTACAAAATCAGAGGCCGACGACGATGGCGTTGGCCTCCATCTCCACCATCTCTCCCT
ATAATCGGTCACCTCCATCTCCTCACCGACATGCCCCACCATACCTTCTTCCATCTCTCT
CAAAAACTCGGCCCAATAATCCACCTTCAACTCGGCCAAATCCCAACTCTAATCATCTCT
TCTCCTCGACTAGCTGAACTCATCCTCAAAACAAATGACCATATCTTCTGCAGCCGCCCA
CAAATCATTGCAGCTCAGTACCTCTCCTTCGGTTGCTCTGATATCACTTTTTCACCTTAC
GGTCCTTACTGGCGCCAAGCTAGAAAAATCTGCGTAACGGAATTACTCAGTTCAAAACGA
GTTAACTCGTTTCAATTCATACGAAATGAGGAAATTAACCGTATGATACAATTGATTTCG
TCTCATTTTGATTCCGAGTTATCGTCTGAACTAGATCTGAGTCAGGTTTTCTTTGCTCTT
GCGAATGATATTTTGTGTAGAGTGGCGTTTGGGAAGAGATTTATTGATGATAGATTGAAA
GATAAGGATTTAGTGAGTGTATTGACGGAGACACAGGCGTTGTTAGCGGGGTTTTGTTTA
GGGGATTTTTTTCCAGATTGGGAATGGGTTAATTGGTTGAGTGGGATGAAGAAGAGATTG
ATGAATAATTTGAAGGATTTGAGAGAAGTTTGTGATGAGATTATAGACGAGCATTTGATG
AAAAAGAGAGATGATGATCAAAACGGCGATGGTTCAGAAGACTTTGTTGATGTATTGCTG
AGGGTTCAGAAAAGAGATGATCTACAAGTGCCCATCACCGATGACAACCTCAAAGCTCTT
ATTCTGGATATGTTTGTGGCTGGAACAGATACATCAGCAGCCACATTAGAATGGACAATG
ACAGAGTTGGCTAGGCATCCAAGTGTTATGAAAAAGGCACAAGATGAAGTAAGAAAAATT
GCAGCTAATAAAGGAAAGGTAGAAGAATTTGATCTTCAACATCTACACTATATGAAAGCA
GTAATAAAGGAGACTATGCGACTGCATCCCCCTGTCCCTCTTCTCGTACCTCGTGAATCC
ATCGAAAAATGTACTCTCGATGACTATGAAATACCTGCAAAAACTAGAGTCTTGATCAAC
ACCTATGCCATTGGAAGAGATCCAGAGTACTGGAACAATCCTCTTGACTACAATCCCGAA
AGGTTTATGGAAAAGGATATCGATTTTAGGGGACAAGATTTTAGGTTTCTACCGTTTGGA
GGAGGGAGAAGAGGTTGTCCAGGTTACGCTCTTGGATTAGCTACAATTGAGTTATCATTG
GCTCGTTTGTTGTATCACTTTGATTGGAAACTACCTACTGGAGTAGAAGCTCAAGATGTC
GACTTGTCAGAGATATTTGGATTGGCTACTAGAAAAAGAGTGGCTCTGAAGCTTGTTCCA
ACCATCAACAAGTTATACCTACTCTCTGGTTAA