Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068388
CDS Infomation

pacid=37452109 polypeptide=PGSC0003DMP400046213 locus=PGSC0003DMG400026594 ID=PGSC0003DMT400068388.v4.03 annot-version=v4.03
Sequence

ATGGCAATTGGAACAGTAATTGGTGCAACAATTGGTATTTTGATAGCGATTTTTTGTGTA
AAATCGTTTTACACATTATGGTGGTGGCCAAAGATGATCGAAAAGAAGCTGAAGAAGGAA
GGTATTCATGGGCTGCCCTACCAATTTCTGTTTGGAAATCTGAAAGAGATGACTAGAATG
TCTAGAGAAGCAAAGAAAACACCGTTAGTAAATCATGATATCGTTCCTTGGGTTAATCCT
TTTATTCTTCATCTTTCTAAAACTTACGAGAGATTATTTGTGATGTGGGCTGGACCAACA
CCTCGGATTGTAGTATCAGATCCAAAGCTAATTAAAGAAGTGGTGAACAGACATAATGAA
TTTCAGAAGCCTCAAGCCAATGCCTTCATTGACATGTTTGTTACTGGACTTGCTAGTTAC
AATGGTCAAAAATGGGACCACCATAGAAAGATACTAAACCCTGCTTTTCATATAGAGAAG
ATTAAGAGGTTGTACCCAGCATTTTGTGATTGTTGTGATGAAATGATAAATAGATGGGAG
GAATTGGTTAGCAAAAGTGGAAGTTGTGAGTTGGATGTGGCAGATGAATTCCTAAATGTA
GGTGGAGATGTTATATCTAAAGCTGCTTTTGGTAGCAATATTGAAGAAGGAAGGACTATT
TTCATACTTCAGAAAGAGCAGTGCGATCTTATTTTGGCTTCTCCATTTACTCTTTTCTTT
CCCTTACTAAGATTCTTTCCAACAGCATCAAACAGAAGAGCAAGATACATCTACAAGAAA
GTGTTATCATTGATTAACGGAATAATAGAGAAGAAAAAAGACACTATGCGAAGAGGAGTC
TCACAAAGTGATGATATTTTAGGGTTACTCTTAAAAGGAGGACTATCAACCACTGAAATA
ATTGAAGAATGTAAGGAATTCTATCTTGCAGGACAAGATACAACCACAGCTTTGCTCTCT
TGGACATTGGTTGCCTTGAGTATGCACCCTGAGTGGCAAGACAAAGCTAGAAATGAAGTC
TTTCAAGTCCTTGGAAAAAACAAACCAAAGTTTGAGGACTTGAATCAATTAAAAATAATG
AACATGATCTTCCAAGAGGTGTTGAGATTATATCCAGCACTCACCCTTATGCGAAGCACC
GTAAAGAACACTAAATTGGGAGATATGACAATTCCTGCAGGAGTACAAATATTTGTGCCT
ATATATATAGCACATCGTGATCCCCAAGTATGGGGAGACGATGCATTGATATTCAATCCA
AATAGGTTCTCAGAAGGGGTATCCAAAGCTGCAAAAGAGCCCTTGTATTTCCCCTTTGGT
TGGGGTCCTCGAATGTGCATTGGTAATAACTTTGGCATGGCAGAAGCCAAGCTCGTTTTA
TCTCAAATTCTGCAGCGTTTTTGGTTTAAGCTCTCTCCTTCCTATGTTCATGCCCCTCAG
GCAATACTCGTTATGAAGCCTCAGTATGGTGCTCAGATAATCCTCAACAAGCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046213
PEP Infomation

pacid=37452109 transcript=PGSC0003DMT400068388 locus=PGSC0003DMG400026594 ID=PGSC0003DMT400068388.v4.03 annot-version=v4.03
Sequence

MAIGTVIGATIGILIAIFCVKSFYTLWWWPKMIEKKLKKEGIHGLPYQFLFGNLKEMTRM
SREAKKTPLVNHDIVPWVNPFILHLSKTYERLFVMWAGPTPRIVVSDPKLIKEVVNRHNE
FQKPQANAFIDMFVTGLASYNGQKWDHHRKILNPAFHIEKIKRLYPAFCDCCDEMINRWE
ELVSKSGSCELDVADEFLNVGGDVISKAAFGSNIEEGRTIFILQKEQCDLILASPFTLFF
PLLRFFPTASNRRARYIYKKVLSLINGIIEKKKDTMRRGVSQSDDILGLLLKGGLSTTEI
IEECKEFYLAGQDTTTALLSWTLVALSMHPEWQDKARNEVFQVLGKNKPKFEDLNQLKIM
NMIFQEVLRLYPALTLMRSTVKNTKLGDMTIPAGVQIFVPIYIAHRDPQVWGDDALIFNP
NRFSEGVSKAAKEPLYFPFGWGPRMCIGNNFGMAEAKLVLSQILQRFWFKLSPSYVHAPQ
AILVMKPQYGAQIILNKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400068388
Transcript Infomation

pacid=37452109 locus=PGSC0003DMG400026594 ID=PGSC0003DMT400068388.v4.03 annot-version=v4.03
Sequence

ATGGCAATTGGAACAGTAATTGGTGCAACAATTGGTATTTTGATAGCGATTTTTTGTGTA
AAATCGTTTTACACATTATGGTGGTGGCCAAAGATGATCGAAAAGAAGCTGAAGAAGGAA
GGTATTCATGGGCTGCCCTACCAATTTCTGTTTGGAAATCTGAAAGAGATGACTAGAATG
TCTAGAGAAGCAAAGAAAACACCGTTAGTAAATCATGATATCGTTCCTTGGGTTAATCCT
TTTATTCTTCATCTTTCTAAAACTTACGAGAGATTATTTGTGATGTGGGCTGGACCAACA
CCTCGGATTGTAGTATCAGATCCAAAGCTAATTAAAGAAGTGGTGAACAGACATAATGAA
TTTCAGAAGCCTCAAGCCAATGCCTTCATTGACATGTTTGTTACTGGACTTGCTAGTTAC
AATGGTCAAAAATGGGACCACCATAGAAAGATACTAAACCCTGCTTTTCATATAGAGAAG
ATTAAGAGGTTGTACCCAGCATTTTGTGATTGTTGTGATGAAATGATAAATAGATGGGAG
GAATTGGTTAGCAAAAGTGGAAGTTGTGAGTTGGATGTGGCAGATGAATTCCTAAATGTA
GGTGGAGATGTTATATCTAAAGCTGCTTTTGGTAGCAATATTGAAGAAGGAAGGACTATT
TTCATACTTCAGAAAGAGCAGTGCGATCTTATTTTGGCTTCTCCATTTACTCTTTTCTTT
CCCTTACTAAGATTCTTTCCAACAGCATCAAACAGAAGAGCAAGATACATCTACAAGAAA
GTGTTATCATTGATTAACGGAATAATAGAGAAGAAAAAAGACACTATGCGAAGAGGAGTC
TCACAAAGTGATGATATTTTAGGGTTACTCTTAAAAGGAGGACTATCAACCACTGAAATA
ATTGAAGAATGTAAGGAATTCTATCTTGCAGGACAAGATACAACCACAGCTTTGCTCTCT
TGGACATTGGTTGCCTTGAGTATGCACCCTGAGTGGCAAGACAAAGCTAGAAATGAAGTC
TTTCAAGTCCTTGGAAAAAACAAACCAAAGTTTGAGGACTTGAATCAATTAAAAATAATG
AACATGATCTTCCAAGAGGTGTTGAGATTATATCCAGCACTCACCCTTATGCGAAGCACC
GTAAAGAACACTAAATTGGGAGATATGACAATTCCTGCAGGAGTACAAATATTTGTGCCT
ATATATATAGCACATCGTGATCCCCAAGTATGGGGAGACGATGCATTGATATTCAATCCA
AATAGGTTCTCAGAAGGGGTATCCAAAGCTGCAAAAGAGCCCTTGTATTTCCCCTTTGGT
TGGGGTCCTCGAATGTGCATTGGTAATAACTTTGGCATGGCAGAAGCCAAGCTCGTTTTA
TCTCAAATTCTGCAGCGTTTTTGGTTTAAGCTCTCTCCTTCCTATGTTCATGCCCCTCAG
GCAATACTCGTTATGAAGCCTCAGTATGGTGCTCAGATAATCCTCAACAAGCTTTGA