Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068374
CDS Infomation

pacid=37453450 polypeptide=PGSC0003DMP400046203 locus=PGSC0003DMG400026587 ID=PGSC0003DMT400068374.v4.03 annot-version=v4.03
Sequence

ATGGTTTGCACTGAGAATGAATTTTTGGAGTGGAAAGATTTCCCAAAAGGACTTAGAGTC
CTTCTTCTTGATAAAGACTTCAATTTTGCCTCTCAAATGAGATCAAGGCTTCAACAAATG
GACTATATAGTTTACACATTCTGCAATGAGAATGATGCTTTGTCTGCAATCTCAAGCAAG
TCGGAAGTATTCCATGTTGCCATTGTAGAGGTAAGTGCTGGCAACAGCGATGGAGGATTC
AAGTTTCTCGAAAGTGCTAAAGATCTACCAACTATAATGGTGTCAGATATTCACTCTATT
AACATCATGATGAAGTGTATAGCGCTTGGTGCAGTTGAGTTCCTTCAGAAACCATTATCA
GATGATAAACTGAGAAATATATGGCAGCATGTAGTTCACAAGGCATTTCATTCTGGAGGA
AAGAATGTCTCTGAGTCACTTAATCCGGTTAAAGAATCTCTTTTGTCCATGCTAGAGCTC
CAACCAGTAAAGCGCGAAGCAGATAATGAGAATACTAATGAAGCTGTGGTGGAAAACCAA
AAAACATCATCATCCTGCTGCGATAAATATCCAGCTCCTTCAACCCCACAACAGAAACAA
GGAGTAAGGTCAGTGGATGATGGTGATCTCCAAGATCATGCTATCTTGTCAAATGAACAA
GATAGTGGGGTGCATGAAGGGGACACAAAATCTGTCGAAACTACTTGTTGCGATTCTGTT
GCTGAGACTACTGTCTTGGCAGATTCTTCTGAGCGACTAGGAGAGGCTATCACAAAGGAG
GAGCATGATTCTGCTGCTGATCAAAATATGGAGGATCCTATTGCTACTTGTTCACGAAGT
AATGACAATGGCAGTGCTTGTTCTGCTGACCCGAACAAAGCTTATGGTCTCCATAGTTCA
AGTGGGACAAAAGCTAATAAGAAGAAAATGAAGGTAGACTGGACACCTGAACTACACAAG
AAATTTGTTAAAGCAGTCGAGAAAATTGGTATAGATCAAGCCATTCCTTCTCGAATACTA
GAGCTGATGAAAGTAGAAGGCCTGACGAGACATAACATAGCTAGTCATCTCCAGAAATTC
AGGATGCAGCGGAGGCAAATTTTGCCAAAGGAAGATGAAAAAAGATGGCGTCATCCTCAA
CCTAGAGATTCAGTACAGAGGACGTATTATCCACATAAACCTGTCATGGCCTTCCCAAAC
TATCATTCTAACCATGCACCCACAGCTGGTCAATTCTATCCTGCCTGGATACCACCAGGA
GGTTACCCGAATGGTGCACATATGTGGGGTTCGCCTTATTATCCTGGATGGCAACCACCT
GAGACATGGCACTGGAATCCTCAACCAGAGCTGTATGCTGATGTATGGGGTTGCCCCGTT
ACGCCTCCATCTCTAGGATCATGTACGCCATACCCTCAGAATGCATCTGGATTTCACAGG
GCTGAGGGAATACAGAATAGATATAGCATAATAGAGAAATCAGTTGATCTTCACCCGGCG
GAGGAGGTGATAGATAAAGTAGTGAAGGAGGCAATAAACAAGCCATGGTTGCCTCTACCC
TTGGGCCTAAAACCTCCATCAACGGAGAGTGTTCTCGACGCACTTTCTAAACAAGGCATC
TCCACCGTCCCTCCACGCCACCACCGCTCTCATCGCCCCTACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046203
PEP Infomation

pacid=37453450 transcript=PGSC0003DMT400068374 locus=PGSC0003DMG400026587 ID=PGSC0003DMT400068374.v4.03 annot-version=v4.03
Sequence

MVCTENEFLEWKDFPKGLRVLLLDKDFNFASQMRSRLQQMDYIVYTFCNENDALSAISSK
SEVFHVAIVEVSAGNSDGGFKFLESAKDLPTIMVSDIHSINIMMKCIALGAVEFLQKPLS
DDKLRNIWQHVVHKAFHSGGKNVSESLNPVKESLLSMLELQPVKREADNENTNEAVVENQ
KTSSSCCDKYPAPSTPQQKQGVRSVDDGDLQDHAILSNEQDSGVHEGDTKSVETTCCDSV
AETTVLADSSERLGEAITKEEHDSAADQNMEDPIATCSRSNDNGSACSADPNKAYGLHSS
SGTKANKKKMKVDWTPELHKKFVKAVEKIGIDQAIPSRILELMKVEGLTRHNIASHLQKF
RMQRRQILPKEDEKRWRHPQPRDSVQRTYYPHKPVMAFPNYHSNHAPTAGQFYPAWIPPG
GYPNGAHMWGSPYYPGWQPPETWHWNPQPELYADVWGCPVTPPSLGSCTPYPQNASGFHR
AEGIQNRYSIIEKSVDLHPAEEVIDKVVKEAINKPWLPLPLGLKPPSTESVLDALSKQGI
STVPPRHHRSHRPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400068374
Transcript Infomation

pacid=37453450 locus=PGSC0003DMG400026587 ID=PGSC0003DMT400068374.v4.03 annot-version=v4.03
Sequence

ATGGTTTGCACTGAGAATGAATTTTTGGAGTGGAAAGATTTCCCAAAAGGACTTAGAGTC
CTTCTTCTTGATAAAGACTTCAATTTTGCCTCTCAAATGAGATCAAGGCTTCAACAAATG
GACTATATAGTTTACACATTCTGCAATGAGAATGATGCTTTGTCTGCAATCTCAAGCAAG
TCGGAAGTATTCCATGTTGCCATTGTAGAGGTAAGTGCTGGCAACAGCGATGGAGGATTC
AAGTTTCTCGAAAGTGCTAAAGATCTACCAACTATAATGGTGTCAGATATTCACTCTATT
AACATCATGATGAAGTGTATAGCGCTTGGTGCAGTTGAGTTCCTTCAGAAACCATTATCA
GATGATAAACTGAGAAATATATGGCAGCATGTAGTTCACAAGGCATTTCATTCTGGAGGA
AAGAATGTCTCTGAGTCACTTAATCCGGTTAAAGAATCTCTTTTGTCCATGCTAGAGCTC
CAACCAGTAAAGCGCGAAGCAGATAATGAGAATACTAATGAAGCTGTGGTGGAAAACCAA
AAAACATCATCATCCTGCTGCGATAAATATCCAGCTCCTTCAACCCCACAACAGAAACAA
GGAGTAAGGTCAGTGGATGATGGTGATCTCCAAGATCATGCTATCTTGTCAAATGAACAA
GATAGTGGGGTGCATGAAGGGGACACAAAATCTGTCGAAACTACTTGTTGCGATTCTGTT
GCTGAGACTACTGTCTTGGCAGATTCTTCTGAGCGACTAGGAGAGGCTATCACAAAGGAG
GAGCATGATTCTGCTGCTGATCAAAATATGGAGGATCCTATTGCTACTTGTTCACGAAGT
AATGACAATGGCAGTGCTTGTTCTGCTGACCCGAACAAAGCTTATGGTCTCCATAGTTCA
AGTGGGACAAAAGCTAATAAGAAGAAAATGAAGGTAGACTGGACACCTGAACTACACAAG
AAATTTGTTAAAGCAGTCGAGAAAATTGGTATAGATCAAGCCATTCCTTCTCGAATACTA
GAGCTGATGAAAGTAGAAGGCCTGACGAGACATAACATAGCTAGTCATCTCCAGAAATTC
AGGATGCAGCGGAGGCAAATTTTGCCAAAGGAAGATGAAAAAAGATGGCGTCATCCTCAA
CCTAGAGATTCAGTACAGAGGACGTATTATCCACATAAACCTGTCATGGCCTTCCCAAAC
TATCATTCTAACCATGCACCCACAGCTGGTCAATTCTATCCTGCCTGGATACCACCAGGA
GGTTACCCGAATGGTGCACATATGTGGGGTTCGCCTTATTATCCTGGATGGCAACCACCT
GAGACATGGCACTGGAATCCTCAACCAGAGCTGTATGCTGATGTATGGGGTTGCCCCGTT
ACGCCTCCATCTCTAGGATCATGTACGCCATACCCTCAGAATGCATCTGGATTTCACAGG
GCTGAGGGAATACAGAATAGATATAGCATAATAGAGAAATCAGTTGATCTTCACCCGGCG
GAGGAGGTGATAGATAAAGTAGTGAAGGAGGCAATAAACAAGCCATGGTTGCCTCTACCC
TTGGGCCTAAAACCTCCATCAACGGAGAGTGTTCTCGACGCACTTTCTAAACAAGGCATC
TCCACCGTCCCTCCACGCCACCACCGCTCTCATCGCCCCTACTGA