Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068351
CDS Infomation

pacid=37451566 polypeptide=PGSC0003DMP400046186 locus=PGSC0003DMG400026579 ID=PGSC0003DMT400068351.v4.03 annot-version=v4.03
Sequence

ATGGCATCAGTGTCAAATGATGGGTTATCCAATAAGAGCGTGAAGAAGCGGCAGTTGGAA
AATGGTTGCCACTCCTCATATTTGGGCATTATGCCAAAATATAAAACTCGAAAAGTCTCA
GCAGTGCGAGATTTTCCTCCAGGGTGTGGTAGAACTTCTCCGAAAGTTGATTTGAATCAT
GAGCAAAATGCTGTAGTGTCCACCAAAATTGAAGACATGGCTAACGTTATATTGGTCGAT
GGTGTTAAAGAGACTAACATTGAGATCAAATCACAGTCTGTTGAGGGTGTGAACTGTCTA
ATTAACTTGAAAGATCAAGAAAAAGTGGATAGGTTAGCAGGGGAAGTGGTAGCGACAAAC
ATGAGTGCAATAGCAAATGGGGTGGGAGAAAAAATAAGTGATGAAAAATCGATAGGAGTT
GAGTTGCCAAAAGATCTCAAAACTAGTGAGATGGAGCTTTCCAAGGGAACGGAAGACATT
CAGTATGACACTTCAGTGAAGGAAGTTGATGAGCAGGGTGTACCTTTGGTTGAAAATGTT
GGTGGTGGGCACAAGACACCTGTTGGTGAAGTCAAAATGTTCTCTCCACCACAGCTAATC
AGTGTTATGGAACATACCTCCTCGCCAAAGAATAAGTACCGCAAAAGAAGAGTATCTGCT
GTTCGAGACTTCCCTCCATTTTGTGGAACAAATGCTCCTAAGCCAACTGTGCAGAAATGT
TTTGGTGTTACTGAAGAAAGCAAGGATGTGGCTGGGTTCGGAAAGGCAGCTACAAATAAT
GAAGTAATTGAGACATTGAGAGATGTTACAGACACTGGGGCATTGCCAGAGAAGTTGATT
GGAAGTGAGGATGCTGATTCTCTGAAAGAGAGGGACGTTTCTAGTCCAAAAGATAGGCAG
TTGGAACAAATCACAATGGTCCGGACTGAAGAACAGGAAGGCGTCCAATGTGATTATGAT
GGAAGAAGTCGGGTGGAAAGAACTGTGGTTATGCCTGAGATAATGATGAAAAAAGAGGGT
GATGCAGGAGTTGTAGGGAAGGAGACACTGGTTTATTCAGAGAACGAAAGGGAAAAGTTA
ACTACTGCAAGTAGTGCTCTTGGTTCTGGAAATGAAAAGCCGATTACAAAAGGTGCTAAG
CCATATTGTGCACGGAAACAAGGGAAGCAAAAGAGTTTGGACGACCCTGTGAGTGGAAAT
GAAATTGTTGTCTCACAGGTCGAAAGTCATTTGACAAAGACTGCAGTCAATGCTCTTGGT
TCTGGGCATGAAATAGTTAAGCCAATTGTGCAAGGTCTGATGGCCAAGCCATACTGTCCA
TGGATGCAGGGAGAGCGAACTAGTTTAGATTGTGGAAACCAAGTTGAGAAGGATGATTTG
TCTGGGCGCAAGAAGGCCAAAGCTGTTACCAGAAAAAATAATCCTAGAGGTAAGAAAAAA
TTAGCTACTGTTGGTGAAGCTACTGATGGACTTTCAAGTGCATTAGTTGTGTTCAATGAC
GAAGGATCTGGTTTGTGGGCTACCAGCAATGATGGAGCTTGCAGTTTGAATAGAGAAGCT
GTACATGAAGATTCTCCCGTTCGACGAGGACAATGTGATTTTGATGTGACCCTACCACCT
TTTGGTCCAAACAGTTCCAGTCATGGTGATTCCCGTACTAAAGTTAGAGAGACTCTTCGT
CTGTTTCAAGGTATCTGTAGAAAGCTTTTGCAAGGTGAAGAATCAAAGTCAAAACCTGAA
GAAGCAAAATCGAAGCAGGGGCCAAACAGAATTGATCTTCATGCAGCAAAAATCATCAAA
GAAAAAGGAAAAGAAGTTAACACAGGTCAGCACATACTGGGAGAAGTTCCCGGAGTTGAA
GTAGGGGATGAGTTCCAATACAGGGTGGAACTTGCTATTGTGGGGGTTCATCGCCTGTAT
CAAGCTGGTATAGATTACATGAAGCAAGGAGGTATGCTGATCGCGATTAGTATTGTTTCT
TCAGGGGTCTATGATGACGGTCTGGAAGATGCTGATGTGTTGATTTATTCTGGGCAAGGT
GGAAATGTGGTGGGTAAGTCCAAAACCCCTGAGGATCAGAAACTGGAAAGAGGTAATTTA
GCTTTGAAGAATAGTATATCAGTAAAGAATCCTGTTCGGGTGATTCGTGGCTCTAAGGAG
ACCAAGACCTCCGACTCTGTGGATGGTAAAGGTAAGTTGGTGACAACATATGTTTATGAT
GGGTTGTACACTGTTGAGAATTATTGGACAGAACAAGGGACAAAGGGTAAGATGGTTTTT
ATGTTTAAGTTGGTGAGAGTTCCTGGGCAACCAGAGCTTGCTTGGAAAGAAGTAAAGTCA
TCGAAAAAGTCCAAAGTGCGCCATGGTGTTTGTGTCCACGACATTACAGATGGAAAGGAG
ACATTCGCGATAAGTGCTGTGAATACAATTGATGGTGAGAAACCTCCACCATTCAATTAC
ATCAAGAAGATTATATATCCTGACTGGTTCCAGCCTTGTCCTTTTAAAGGTTGTGATTGT
GTTGGGAGATGTTCTGATTCCAAGAAGTGCTCATGTGCAGTTAAAAATGGAGGCGAGATC
CCATACAACCGTAATGGGGCTATTGTTGAAGTGAAGCCTCTGGTATATGAATGTGGTCCT
CATTGTAAATGTCCCCCTTCTTGCTACAATAGAGTCAGCCAACATGGTATTAAAGTTCCA
CTTGAGATCTTTAAGACAAATTCAAGGGGCTGGGGTGTGAGAGCTCTAACATCTATTCCT
TCAGGAACCTTTATATGTGAGTATGTAGGAGAACTTCTTGAAGACAAGGAAGCTGAACAA
AGAATTGGCAGTGATGAGTACCTTTTTGATATTGGGCAGAACTATAGTGATTGTTCTGTG
AACTCTTCCAGGCAAGCAGAATTAAGTGAGGTAGTAGAAGAGGGTTATACAATTGATGCA
GCTCAGTATGGAAATATCGGGAGATTTATCAATCATAGTTGCTCACCTAATTTGTATGCA
CAAAGCGTTCTTTATGATCATGAAGATAAGAAAATGCCTCATATCATGCTTTTTGCAGCA
GATAACATTCCTCCTTTGGCGGAGCTCAGTTATCATTACAATTATTCCGTGGATCAGGTA
CATGACTCCAAGGGCAATATCAAGGTGAAGAAATGCTTTTGTGGATCTTCAGAGTGTAGT
GGTAGGATGTACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046186
PEP Infomation

pacid=37451566 transcript=PGSC0003DMT400068351 locus=PGSC0003DMG400026579 ID=PGSC0003DMT400068351.v4.03 annot-version=v4.03
Sequence

MASVSNDGLSNKSVKKRQLENGCHSSYLGIMPKYKTRKVSAVRDFPPGCGRTSPKVDLNH
EQNAVVSTKIEDMANVILVDGVKETNIEIKSQSVEGVNCLINLKDQEKVDRLAGEVVATN
MSAIANGVGEKISDEKSIGVELPKDLKTSEMELSKGTEDIQYDTSVKEVDEQGVPLVENV
GGGHKTPVGEVKMFSPPQLISVMEHTSSPKNKYRKRRVSAVRDFPPFCGTNAPKPTVQKC
FGVTEESKDVAGFGKAATNNEVIETLRDVTDTGALPEKLIGSEDADSLKERDVSSPKDRQ
LEQITMVRTEEQEGVQCDYDGRSRVERTVVMPEIMMKKEGDAGVVGKETLVYSENEREKL
TTASSALGSGNEKPITKGAKPYCARKQGKQKSLDDPVSGNEIVVSQVESHLTKTAVNALG
SGHEIVKPIVQGLMAKPYCPWMQGERTSLDCGNQVEKDDLSGRKKAKAVTRKNNPRGKKK
LATVGEATDGLSSALVVFNDEGSGLWATSNDGACSLNREAVHEDSPVRRGQCDFDVTLPP
FGPNSSSHGDSRTKVRETLRLFQGICRKLLQGEESKSKPEEAKSKQGPNRIDLHAAKIIK
EKGKEVNTGQHILGEVPGVEVGDEFQYRVELAIVGVHRLYQAGIDYMKQGGMLIAISIVS
SGVYDDGLEDADVLIYSGQGGNVVGKSKTPEDQKLERGNLALKNSISVKNPVRVIRGSKE
TKTSDSVDGKGKLVTTYVYDGLYTVENYWTEQGTKGKMVFMFKLVRVPGQPELAWKEVKS
SKKSKVRHGVCVHDITDGKETFAISAVNTIDGEKPPPFNYIKKIIYPDWFQPCPFKGCDC
VGRCSDSKKCSCAVKNGGEIPYNRNGAIVEVKPLVYECGPHCKCPPSCYNRVSQHGIKVP
LEIFKTNSRGWGVRALTSIPSGTFICEYVGELLEDKEAEQRIGSDEYLFDIGQNYSDCSV
NSSRQAELSEVVEEGYTIDAAQYGNIGRFINHSCSPNLYAQSVLYDHEDKKMPHIMLFAA
DNIPPLAELSYHYNYSVDQVHDSKGNIKVKKCFCGSSECSGRMY*

Transcript Sequence

Transcript ID

PGSC0003DMT400068351
Transcript Infomation

pacid=37451566 locus=PGSC0003DMG400026579 ID=PGSC0003DMT400068351.v4.03 annot-version=v4.03
Sequence

ATGGCATCAGTGTCAAATGATGGGTTATCCAATAAGAGCGTGAAGAAGCGGCAGTTGGAA
AATGGTTGCCACTCCTCATATTTGGGCATTATGCCAAAATATAAAACTCGAAAAGTCTCA
GCAGTGCGAGATTTTCCTCCAGGGTGTGGTAGAACTTCTCCGAAAGTTGATTTGAATCAT
GAGCAAAATGCTGTAGTGTCCACCAAAATTGAAGACATGGCTAACGTTATATTGGTCGAT
GGTGTTAAAGAGACTAACATTGAGATCAAATCACAGTCTGTTGAGGGTGTGAACTGTCTA
ATTAACTTGAAAGATCAAGAAAAAGTGGATAGGTTAGCAGGGGAAGTGGTAGCGACAAAC
ATGAGTGCAATAGCAAATGGGGTGGGAGAAAAAATAAGTGATGAAAAATCGATAGGAGTT
GAGTTGCCAAAAGATCTCAAAACTAGTGAGATGGAGCTTTCCAAGGGAACGGAAGACATT
CAGTATGACACTTCAGTGAAGGAAGTTGATGAGCAGGGTGTACCTTTGGTTGAAAATGTT
GGTGGTGGGCACAAGACACCTGTTGGTGAAGTCAAAATGTTCTCTCCACCACAGCTAATC
AGTGTTATGGAACATACCTCCTCGCCAAAGAATAAGTACCGCAAAAGAAGAGTATCTGCT
GTTCGAGACTTCCCTCCATTTTGTGGAACAAATGCTCCTAAGCCAACTGTGCAGAAATGT
TTTGGTGTTACTGAAGAAAGCAAGGATGTGGCTGGGTTCGGAAAGGCAGCTACAAATAAT
GAAGTAATTGAGACATTGAGAGATGTTACAGACACTGGGGCATTGCCAGAGAAGTTGATT
GGAAGTGAGGATGCTGATTCTCTGAAAGAGAGGGACGTTTCTAGTCCAAAAGATAGGCAG
TTGGAACAAATCACAATGGTCCGGACTGAAGAACAGGAAGGCGTCCAATGTGATTATGAT
GGAAGAAGTCGGGTGGAAAGAACTGTGGTTATGCCTGAGATAATGATGAAAAAAGAGGGT
GATGCAGGAGTTGTAGGGAAGGAGACACTGGTTTATTCAGAGAACGAAAGGGAAAAGTTA
ACTACTGCAAGTAGTGCTCTTGGTTCTGGAAATGAAAAGCCGATTACAAAAGGTGCTAAG
CCATATTGTGCACGGAAACAAGGGAAGCAAAAGAGTTTGGACGACCCTGTGAGTGGAAAT
GAAATTGTTGTCTCACAGGTCGAAAGTCATTTGACAAAGACTGCAGTCAATGCTCTTGGT
TCTGGGCATGAAATAGTTAAGCCAATTGTGCAAGGTCTGATGGCCAAGCCATACTGTCCA
TGGATGCAGGGAGAGCGAACTAGTTTAGATTGTGGAAACCAAGTTGAGAAGGATGATTTG
TCTGGGCGCAAGAAGGCCAAAGCTGTTACCAGAAAAAATAATCCTAGAGGTAAGAAAAAA
TTAGCTACTGTTGGTGAAGCTACTGATGGACTTTCAAGTGCATTAGTTGTGTTCAATGAC
GAAGGATCTGGTTTGTGGGCTACCAGCAATGATGGAGCTTGCAGTTTGAATAGAGAAGCT
GTACATGAAGATTCTCCCGTTCGACGAGGACAATGTGATTTTGATGTGACCCTACCACCT
TTTGGTCCAAACAGTTCCAGTCATGGTGATTCCCGTACTAAAGTTAGAGAGACTCTTCGT
CTGTTTCAAGGTATCTGTAGAAAGCTTTTGCAAGGTGAAGAATCAAAGTCAAAACCTGAA
GAAGCAAAATCGAAGCAGGGGCCAAACAGAATTGATCTTCATGCAGCAAAAATCATCAAA
GAAAAAGGAAAAGAAGTTAACACAGGTCAGCACATACTGGGAGAAGTTCCCGGAGTTGAA
GTAGGGGATGAGTTCCAATACAGGGTGGAACTTGCTATTGTGGGGGTTCATCGCCTGTAT
CAAGCTGGTATAGATTACATGAAGCAAGGAGGTATGCTGATCGCGATTAGTATTGTTTCT
TCAGGGGTCTATGATGACGGTCTGGAAGATGCTGATGTGTTGATTTATTCTGGGCAAGGT
GGAAATGTGGTGGGTAAGTCCAAAACCCCTGAGGATCAGAAACTGGAAAGAGGTAATTTA
GCTTTGAAGAATAGTATATCAGTAAAGAATCCTGTTCGGGTGATTCGTGGCTCTAAGGAG
ACCAAGACCTCCGACTCTGTGGATGGTAAAGGTAAGTTGGTGACAACATATGTTTATGAT
GGGTTGTACACTGTTGAGAATTATTGGACAGAACAAGGGACAAAGGGTAAGATGGTTTTT
ATGTTTAAGTTGGTGAGAGTTCCTGGGCAACCAGAGCTTGCTTGGAAAGAAGTAAAGTCA
TCGAAAAAGTCCAAAGTGCGCCATGGTGTTTGTGTCCACGACATTACAGATGGAAAGGAG
ACATTCGCGATAAGTGCTGTGAATACAATTGATGGTGAGAAACCTCCACCATTCAATTAC
ATCAAGAAGATTATATATCCTGACTGGTTCCAGCCTTGTCCTTTTAAAGGTTGTGATTGT
GTTGGGAGATGTTCTGATTCCAAGAAGTGCTCATGTGCAGTTAAAAATGGAGGCGAGATC
CCATACAACCGTAATGGGGCTATTGTTGAAGTGAAGCCTCTGGTATATGAATGTGGTCCT
CATTGTAAATGTCCCCCTTCTTGCTACAATAGAGTCAGCCAACATGGTATTAAAGTTCCA
CTTGAGATCTTTAAGACAAATTCAAGGGGCTGGGGTGTGAGAGCTCTAACATCTATTCCT
TCAGGAACCTTTATATGTGAGTATGTAGGAGAACTTCTTGAAGACAAGGAAGCTGAACAA
AGAATTGGCAGTGATGAGTACCTTTTTGATATTGGGCAGAACTATAGTGATTGTTCTGTG
AACTCTTCCAGGCAAGCAGAATTAAGTGAGGTAGTAGAAGAGGGTTATACAATTGATGCA
GCTCAGTATGGAAATATCGGGAGATTTATCAATCATAGTTGCTCACCTAATTTGTATGCA
CAAAGCGTTCTTTATGATCATGAAGATAAGAAAATGCCTCATATCATGCTTTTTGCAGCA
GATAACATTCCTCCTTTGGCGGAGCTCAGTTATCATTACAATTATTCCGTGGATCAGGTA
CATGACTCCAAGGGCAATATCAAGGTGAAGAAATGCTTTTGTGGATCTTCAGAGTGTAGT
GGTAGGATGTACTAG