Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068349
CDS Infomation

pacid=37450385 polypeptide=PGSC0003DMP400046184 locus=PGSC0003DMG400026578 ID=PGSC0003DMT400068349.v4.03 annot-version=v4.03
Sequence

ATGTCTTTGAAGAACAAAGAGGCAAAGGTGTTGAAACAAAAGCAAAATCATGATAATACT
GTAGTTAGAACTCCTCCTGATTATTATCAGGGTTTCCTTAAGGGTTTAGATGAAGATACA
AGCAATAGGTCAAGTTCTGGATCCGCCATCTCTAACACTGAGAGCTCTGCACAATTTGGT
AGTACTGAAGCAAGTGATTTGACAGGCCCTGCCCAATCCAACAAATGGGAAGCAATGGTG
CCTTCAAGGAAGAGAACCTGCATAAGTCGTTCAAAGCATTCTTCAGTTGAAAAGCTCACT
AAAGACCTGTGTACCATCCTACATGAACAACAATCTTCATACTTCTCTGGATCTTCTGAA
GAGGATTTGCTTTTTGAGAGTGACAAGCCTATGGTCTCTGTTGAGATTGGACATGGAAGT
GTGCTTATTCGACATCCGAACTCAATAGGTAGAGAAGAAGAATCAGAAGGCAGTTCCCTG
TCGGTTAATAACAAGCGACGTTATGTAAATGAGGCTTATTCACGATTGTCTACCCCACCT
GTAAATATTAATAGGGGTGTCAATTTACCAAATCTTGGCACGGAGAGAACCAAGAAGCCT
AACAGTCAGGGAATGGAACAACACCAGATTAAAAGGGATAAGGATCACCTTGAAAAATTG
CACATTCTTGGACATCATACTTCACCACTGTGCCATATAGACCTGAAGGATGTACTTAAT
TATGAAGAGTTCGTGACGCATTTCACAAGTGATGAACAGAAGCAACTACTAAAATACTTA
GCTCCTGTTGATTCTTTTGCACCCCCAGATAGTCTCAAAAACATGTTCGAGAGCTCTCAT
TTTGAGGAGAATTTGTCTTCCTTCCAGAAACTTCTTGCAGAAGGTGTTTTCGATAGCTCA
TTGTCAGGGGTGAAAATAGAAGATTCTAGGACCTTGAAGAGGTTAATATTGTGCTATTTA
ACAAAGTCAAAGTGGGTGGAAAAGTACAGCCTTCTCAAGGACACAAAATGTACAAGTAGT
ACCAATGGTTATGAAGTTACAGGAGGGCCCAATGCTATTGGGACAGGTCATTCAGTAAAT
GTGAAGAGGCCACTGGAGGGGCACCATCCAAAGTATGCAGACCATTTCGCTTCAGGTGCA
AAGAAAGCAATGAAGAGCCCCAAGAGGGTGGTGATGAAAAGTAGCTATGAGCAGAAGGAA
TTAGTAGACAACAATAGTTCTTGCTTCAGTCTGAAATGCCTATTTCCCTTGCCTTCTAAT
AGTTCTCCTGTGCTGGATTCTTTCCATGTTGCAAATGACCAGGACGTGCTACTGGATGTG
CCATCCAACAGCTCCTTTGCGCAGGCAGAACTCCTCCGACCAACATCTAATTTTGCTGCA
CAAGCAAGCACCAGTAGCAGCTCTGTGTATCCACATCTTGTACGTCCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046184
PEP Infomation

pacid=37450385 transcript=PGSC0003DMT400068349 locus=PGSC0003DMG400026578 ID=PGSC0003DMT400068349.v4.03 annot-version=v4.03
Sequence

MSLKNKEAKVLKQKQNHDNTVVRTPPDYYQGFLKGLDEDTSNRSSSGSAISNTESSAQFG
STEASDLTGPAQSNKWEAMVPSRKRTCISRSKHSSVEKLTKDLCTILHEQQSSYFSGSSE
EDLLFESDKPMVSVEIGHGSVLIRHPNSIGREEESEGSSLSVNNKRRYVNEAYSRLSTPP
VNINRGVNLPNLGTERTKKPNSQGMEQHQIKRDKDHLEKLHILGHHTSPLCHIDLKDVLN
YEEFVTHFTSDEQKQLLKYLAPVDSFAPPDSLKNMFESSHFEENLSSFQKLLAEGVFDSS
LSGVKIEDSRTLKRLILCYLTKSKWVEKYSLLKDTKCTSSTNGYEVTGGPNAIGTGHSVN
VKRPLEGHHPKYADHFASGAKKAMKSPKRVVMKSSYEQKELVDNNSSCFSLKCLFPLPSN
SSPVLDSFHVANDQDVLLDVPSNSSFAQAELLRPTSNFAAQASTSSSSVYPHLVRP*

Transcript Sequence

Transcript ID

PGSC0003DMT400068349
Transcript Infomation

pacid=37450385 locus=PGSC0003DMG400026578 ID=PGSC0003DMT400068349.v4.03 annot-version=v4.03
Sequence

ATGTCTTTGAAGAACAAAGAGGCAAAGGTGTTGAAACAAAAGCAAAATCATGATAATACT
GTAGTTAGAACTCCTCCTGATTATTATCAGGGTTTCCTTAAGGGTTTAGATGAAGATACA
AGCAATAGGTCAAGTTCTGGATCCGCCATCTCTAACACTGAGAGCTCTGCACAATTTGGT
AGTACTGAAGCAAGTGATTTGACAGGCCCTGCCCAATCCAACAAATGGGAAGCAATGGTG
CCTTCAAGGAAGAGAACCTGCATAAGTCGTTCAAAGCATTCTTCAGTTGAAAAGCTCACT
AAAGACCTGTGTACCATCCTACATGAACAACAATCTTCATACTTCTCTGGATCTTCTGAA
GAGGATTTGCTTTTTGAGAGTGACAAGCCTATGGTCTCTGTTGAGATTGGACATGGAAGT
GTGCTTATTCGACATCCGAACTCAATAGGTAGAGAAGAAGAATCAGAAGGCAGTTCCCTG
TCGGTTAATAACAAGCGACGTTATGTAAATGAGGCTTATTCACGATTGTCTACCCCACCT
GTAAATATTAATAGGGGTGTCAATTTACCAAATCTTGGCACGGAGAGAACCAAGAAGCCT
AACAGTCAGGGAATGGAACAACACCAGATTAAAAGGGATAAGGATCACCTTGAAAAATTG
CACATTCTTGGACATCATACTTCACCACTGTGCCATATAGACCTGAAGGATGTACTTAAT
TATGAAGAGTTCGTGACGCATTTCACAAGTGATGAACAGAAGCAACTACTAAAATACTTA
GCTCCTGTTGATTCTTTTGCACCCCCAGATAGTCTCAAAAACATGTTCGAGAGCTCTCAT
TTTGAGGAGAATTTGTCTTCCTTCCAGAAACTTCTTGCAGAAGGTGTTTTCGATAGCTCA
TTGTCAGGGGTGAAAATAGAAGATTCTAGGACCTTGAAGAGGTTAATATTGTGCTATTTA
ACAAAGTCAAAGTGGGTGGAAAAGTACAGCCTTCTCAAGGACACAAAATGTACAAGTAGT
ACCAATGGTTATGAAGTTACAGGAGGGCCCAATGCTATTGGGACAGGTCATTCAGTAAAT
GTGAAGAGGCCACTGGAGGGGCACCATCCAAAGTATGCAGACCATTTCGCTTCAGGTGCA
AAGAAAGCAATGAAGAGCCCCAAGAGGGTGGTGATGAAAAGTAGCTATGAGCAGAAGGAA
TTAGTAGACAACAATAGTTCTTGCTTCAGTCTGAAATGCCTATTTCCCTTGCCTTCTAAT
AGTTCTCCTGTGCTGGATTCTTTCCATGTTGCAAATGACCAGGACGTGCTACTGGATGTG
CCATCCAACAGCTCCTTTGCGCAGGCAGAACTCCTCCGACCAACATCTAATTTTGCTGCA
CAAGCAAGCACCAGTAGCAGCTCTGTGTATCCACATCTTGTACGTCCCTAG