Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068312
CDS Infomation

pacid=37429129 polypeptide=PGSC0003DMP400046155 locus=PGSC0003DMG400026559 ID=PGSC0003DMT400068312.v4.03 annot-version=v4.03
Sequence

ATGGATGCTGACACAGTGAATAATGCATCTACTTCCACCAAAGGTGTTAACACCAATGAA
GTGGAGGCAGAATCAAATACAGTAGACTCTCTAGAAGTTTTGTCTTCCAGTGGTAATGTC
ATGCAAGAAGTAGGAAGTGTCGGGGAGATTTTAACAAGGCTTGAACTAGACTTGGCATGT
GTCTCTGAGAAACTAGTTAATTTGGATTTATTTGTGATGCATGTGGAAACAAGAGAAAGT
GACTTTGAGGCTTTTGCCTCTGAGAAGGAGGGCACTTCAAATGACATTGTTGAGAAGGCA
ATAGAGTTTGATCTCTTATCTGGGGTCCTGGATTCAGAGGTGACGGAGCTAGGCGGTTTA
TTATCCTCTGTTGCAATAGAGATTGACAATGTGCGGAAGGTCATATCTTCACGTGGCTAT
GTGGATGAGGCTTTCATTTTAATAGAAGAGAAGTTACATGACAGTGAAAAATCCCTCAAG
CAGTCGCAGGACCACCTTTTAGAATTGAGGGGGCAGTGTACCAACTTCCATGGGATTATG
CTCACCTCCCAGGGGGACCAAAATTGGGAAGATAGCGAGGCAGCAGACTATTTTAATGGT
GATGCACTTTTAACTCCAAAGACAAAGATAAAAATGCAGACTGTTGAACAGCAGAGACAC
ATTCTGCGGATGCTGGAGAAGTCTTTGGCCAGAGAGTTAGATCTTGAGAAGAAGCTTACT
GAATCTAGACAAGTTGAAGAAGAATTAGAAGTCAGGTTGCAGCAAGAAGCTTTATACATG
GAGGAAGAAATTGAAGATGCTTCGCAAAGGTTGTTTGAGGGAGAGAATGCTGCTGAAGTC
CTTTTAGGAATTTCAAAATCACTACTGGGTCGACTCCAGATGGCACATTTTAATCTGAAC
GGTACTGTTCAGAAAGAAAGCTACTTACAGTCTAAACTTCAAGAAATGGAGGAACATTTA
AAAGCAAAAGACAACTTGCTAGGGAAGTTTGAAAGCACTTCTAAAGAGCTCGGGGACAAG
GTTAAATCTCTTGAGAAACGGTTGGAGGACTCTGAGTTCCAGCTGTCCAATTATACAGCA
TCTGCAAAGAAAAGTCAGGAGTTAGAATCTGAGATCCTTGAAATGGAGGATATAATCAAT
ACGTTGAAGGAAAAGAATTCTGAAGCAGAGAGAAGAATTGATACAGCAGAAACTGAGTGT
AAAATATTGAAAGAAGCAAATGTGGAACTTGACAAAGAGCTGAACTTCCTGAAAAGCAGT
AGTAGCATTACTTCTGAGAGGATAAATGTGCTTGAAAAACAGCTGAGGGACTCTGAGCTT
CGACTTCAGCATGCAGTTGCATCTGCTGAAGCTAGTCAGGAGAAGCAAATCATGTTGAAT
TCTACAATCCAAGACATGGAAGATTTGATTGAGGATCTAAAATCTAAGGTTTCTAAAGCC
AAAAGTTTGATGGAGAGTGCTGAAGATAAGTGCATTATCTTGTCAGAATCTAACTCAGAT
CTCAATGAAGAATTAACTTTTGTGAGGAGTAGGTTGGCATGTTTGGAGTCATCGTTACGC
CAAGCTGAGGAAATGAAGAAGGCTACTGCCCGAGATATTAACTTCCGCAGTAAATTGATA
ACAGATCTAATTTTGCAATTGGCTCTTGAAAGAGAGAGACTTGAAAAACAGATTTCTTTG
CTGATAATGGAAAATAAGGCCCAGAAGAAGCTTTTTCAGCAAAAGGATAAAGTTCCTTCG
CCAGCTCCCCCAAGTGATGGCAAAGATACCAGGGAATCCATGCTTCCCAAGGCTGAGCTT
TCTGCTGCAACTTCTCCGAATGAATGCAAGGAAGAAATATCTAAGTTCTCATCAATAACT
AATGTAGAAGAGAATGTTTCTGGAGACTTTATGTCGAGTGAGTCAAAAGAGACTGATTCT
TCAACCAGACTTGATGCCTCGCGGGACATAGATGCAAGGCAGCTTAATTGGAAGTATGTC
CTTACAGCAGTTCTTGTGTTTTTGATATCCACAGTGGTAACCTTTTTAATGCAGAACCAG
AGTATCCAGCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400046155
PEP Infomation

pacid=37429129 transcript=PGSC0003DMT400068312 locus=PGSC0003DMG400026559 ID=PGSC0003DMT400068312.v4.03 annot-version=v4.03
Sequence

MDADTVNNASTSTKGVNTNEVEAESNTVDSLEVLSSSGNVMQEVGSVGEILTRLELDLAC
VSEKLVNLDLFVMHVETRESDFEAFASEKEGTSNDIVEKAIEFDLLSGVLDSEVTELGGL
LSSVAIEIDNVRKVISSRGYVDEAFILIEEKLHDSEKSLKQSQDHLLELRGQCTNFHGIM
LTSQGDQNWEDSEAADYFNGDALLTPKTKIKMQTVEQQRHILRMLEKSLARELDLEKKLT
ESRQVEEELEVRLQQEALYMEEEIEDASQRLFEGENAAEVLLGISKSLLGRLQMAHFNLN
GTVQKESYLQSKLQEMEEHLKAKDNLLGKFESTSKELGDKVKSLEKRLEDSEFQLSNYTA
SAKKSQELESEILEMEDIINTLKEKNSEAERRIDTAETECKILKEANVELDKELNFLKSS
SSITSERINVLEKQLRDSELRLQHAVASAEASQEKQIMLNSTIQDMEDLIEDLKSKVSKA
KSLMESAEDKCIILSESNSDLNEELTFVRSRLACLESSLRQAEEMKKATARDINFRSKLI
TDLILQLALERERLEKQISLLIMENKAQKKLFQQKDKVPSPAPPSDGKDTRESMLPKAEL
SAATSPNECKEEISKFSSITNVEENVSGDFMSSESKETDSSTRLDASRDIDARQLNWKYV
LTAVLVFLISTVVTFLMQNQSIQL*

Transcript Sequence

Transcript ID

PGSC0003DMT400068312
Transcript Infomation

pacid=37429129 locus=PGSC0003DMG400026559 ID=PGSC0003DMT400068312.v4.03 annot-version=v4.03
Sequence

ATGGATGCTGACACAGTGAATAATGCATCTACTTCCACCAAAGGTGTTAACACCAATGAA
GTGGAGGCAGAATCAAATACAGTAGACTCTCTAGAAGTTTTGTCTTCCAGTGGTAATGTC
ATGCAAGAAGTAGGAAGTGTCGGGGAGATTTTAACAAGGCTTGAACTAGACTTGGCATGT
GTCTCTGAGAAACTAGTTAATTTGGATTTATTTGTGATGCATGTGGAAACAAGAGAAAGT
GACTTTGAGGCTTTTGCCTCTGAGAAGGAGGGCACTTCAAATGACATTGTTGAGAAGGCA
ATAGAGTTTGATCTCTTATCTGGGGTCCTGGATTCAGAGGTGACGGAGCTAGGCGGTTTA
TTATCCTCTGTTGCAATAGAGATTGACAATGTGCGGAAGGTCATATCTTCACGTGGCTAT
GTGGATGAGGCTTTCATTTTAATAGAAGAGAAGTTACATGACAGTGAAAAATCCCTCAAG
CAGTCGCAGGACCACCTTTTAGAATTGAGGGGGCAGTGTACCAACTTCCATGGGATTATG
CTCACCTCCCAGGGGGACCAAAATTGGGAAGATAGCGAGGCAGCAGACTATTTTAATGGT
GATGCACTTTTAACTCCAAAGACAAAGATAAAAATGCAGACTGTTGAACAGCAGAGACAC
ATTCTGCGGATGCTGGAGAAGTCTTTGGCCAGAGAGTTAGATCTTGAGAAGAAGCTTACT
GAATCTAGACAAGTTGAAGAAGAATTAGAAGTCAGGTTGCAGCAAGAAGCTTTATACATG
GAGGAAGAAATTGAAGATGCTTCGCAAAGGTTGTTTGAGGGAGAGAATGCTGCTGAAGTC
CTTTTAGGAATTTCAAAATCACTACTGGGTCGACTCCAGATGGCACATTTTAATCTGAAC
GGTACTGTTCAGAAAGAAAGCTACTTACAGTCTAAACTTCAAGAAATGGAGGAACATTTA
AAAGCAAAAGACAACTTGCTAGGGAAGTTTGAAAGCACTTCTAAAGAGCTCGGGGACAAG
GTTAAATCTCTTGAGAAACGGTTGGAGGACTCTGAGTTCCAGCTGTCCAATTATACAGCA
TCTGCAAAGAAAAGTCAGGAGTTAGAATCTGAGATCCTTGAAATGGAGGATATAATCAAT
ACGTTGAAGGAAAAGAATTCTGAAGCAGAGAGAAGAATTGATACAGCAGAAACTGAGTGT
AAAATATTGAAAGAAGCAAATGTGGAACTTGACAAAGAGCTGAACTTCCTGAAAAGCAGT
AGTAGCATTACTTCTGAGAGGATAAATGTGCTTGAAAAACAGCTGAGGGACTCTGAGCTT
CGACTTCAGCATGCAGTTGCATCTGCTGAAGCTAGTCAGGAGAAGCAAATCATGTTGAAT
TCTACAATCCAAGACATGGAAGATTTGATTGAGGATCTAAAATCTAAGGTTTCTAAAGCC
AAAAGTTTGATGGAGAGTGCTGAAGATAAGTGCATTATCTTGTCAGAATCTAACTCAGAT
CTCAATGAAGAATTAACTTTTGTGAGGAGTAGGTTGGCATGTTTGGAGTCATCGTTACGC
CAAGCTGAGGAAATGAAGAAGGCTACTGCCCGAGATATTAACTTCCGCAGTAAATTGATA
ACAGATCTAATTTTGCAATTGGCTCTTGAAAGAGAGAGACTTGAAAAACAGATTTCTTTG
CTGATAATGGAAAATAAGGCCCAGAAGAAGCTTTTTCAGCAAAAGGATAAAGTTCCTTCG
CCAGCTCCCCCAAGTGATGGCAAAGATACCAGGGAATCCATGCTTCCCAAGGCTGAGCTT
TCTGCTGCAACTTCTCCGAATGAATGCAAGGAAGAAATATCTAAGTTCTCATCAATAACT
AATGTAGAAGAGAATGTTTCTGGAGACTTTATGTCGAGTGAGTCAAAAGAGACTGATTCT
TCAACCAGACTTGATGCCTCGCGGGACATAGATGCAAGGCAGCTTAATTGGAAGTATGTC
CTTACAGCAGTTCTTGTGTTTTTGATATCCACAGTGGTAACCTTTTTAATGCAGAACCAG
AGTATCCAGCTTTGA