Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068302
CDS Infomation

pacid=37428225 polypeptide=PGSC0003DMP400046145 locus=PGSC0003DMG400026554 ID=PGSC0003DMT400068302.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTCTTCCTTTTTGGAGAAACTTCAGTACAGCTCAGAGAACTCCAAGAATATTA
ATTCTTGTTTCCTTAACATTAATCATTCTTGGTCTTATTCCTCTTTACCATCCTTTTTAT
AGGTACCCTGCGAATTTAGTCGTAGACCATTCTTCTAAAATTACATCATCACTATCATAT
GGTACTACAACTAAGTACCAAAAGATAATAGAACAGGATGATGAAGACACGTGTGATGTA
TTCATTGGAGAGTGGGTTCATAATCCGGATGCTCCGTATTACACGAACTTGACATGTTGG
GCGATCCACGAACACCAAAATTGCATGAAATATGGGAGGCCGGATATTGACTTCTTGAAA
TGGAGATGGAAGCCTAAAGGGTGCGATCTACCAATTTTTAACCCGTATCAATTTTTGGAT
ATGATGAGAAATAAGTCTATGGCATTTATTGGAGATTCAGTCGGAAGAAATCAAATGCAG
TCTTTAATTTGCCTCTTGTCTCGGGTGGAATATCCGATTGATATTTCTTATGACACAGAT
CAAAATTTCAGAAGGTGGAAATACACGACATATAATTTCACCTTAGCAGCATATTGGTCA
CCATTTTTGGTCACGGTTAAAGAATCAGACCCTGATGGTCCTAGCCATACAGGACTTTTC
AATCTTTATCTTGATGAACCTGATCCAAAATGGACTACTCAAATTGAAAATGAACAATTC
AATTATTTGATCCTCAATTCTGCTCATTGGTACACAAGGTGCAGTATCTACTACGAAAAA
AATCAAATAATTGGGTGTCATTACTGTGGACTACCAAATATTACTGATCTCTCAATAAAT
TATGGCTATCAAAAAGCACTTAAAACAACTTTAAAAGCCATAAATAGTTTAGAGAATTTT
AAAGGTGTTACTTTTGTTAGGACAATTGCACCTTCTCATTTTGAAGGTGGTGAATGGAAT
AAAGGTGGAAATTGTGTGAGACAAGGTCCATTTAGAAGTAATGAGACAACATTGGATGGT
ATAAGTTTGGAATTTTATAGGACACAAGTTGAAGAATTTAAGATTGCAGCTAAGGAAGGG
AAGAAAAAAGGTAAAAGGTTTAGATTATTGGATATGACACAAGCAATGTTGTTGAGACCA
GATGGTCATCCTAGTAAATATGGACATTGGCCAAATGCTAATGTGGTTTTGTATAATGAT
TGTGTGCATTGGTGTTTGCCTGGTCCTATTGATACTTGGAGTGATTTCTTGCTTCATATG
TTGAAGTTAGAGGGAAGGAGAGCTCTTGAAGAAAGTCTTCAATTGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400046145
PEP Infomation

pacid=37428225 transcript=PGSC0003DMT400068302 locus=PGSC0003DMG400026554 ID=PGSC0003DMT400068302.v4.03 annot-version=v4.03
Sequence

MELLPFWRNFSTAQRTPRILILVSLTLIILGLIPLYHPFYRYPANLVVDHSSKITSSLSY
GTTTKYQKIIEQDDEDTCDVFIGEWVHNPDAPYYTNLTCWAIHEHQNCMKYGRPDIDFLK
WRWKPKGCDLPIFNPYQFLDMMRNKSMAFIGDSVGRNQMQSLICLLSRVEYPIDISYDTD
QNFRRWKYTTYNFTLAAYWSPFLVTVKESDPDGPSHTGLFNLYLDEPDPKWTTQIENEQF
NYLILNSAHWYTRCSIYYEKNQIIGCHYCGLPNITDLSINYGYQKALKTTLKAINSLENF
KGVTFVRTIAPSHFEGGEWNKGGNCVRQGPFRSNETTLDGISLEFYRTQVEEFKIAAKEG
KKKGKRFRLLDMTQAMLLRPDGHPSKYGHWPNANVVLYNDCVHWCLPGPIDTWSDFLLHM
LKLEGRRALEESLQLK*

Transcript Sequence

Transcript ID

PGSC0003DMT400068302
Transcript Infomation

pacid=37428225 locus=PGSC0003DMG400026554 ID=PGSC0003DMT400068302.v4.03 annot-version=v4.03
Sequence

ATGGAGCTTCTTCCTTTTTGGAGAAACTTCAGTACAGCTCAGAGAACTCCAAGAATATTA
ATTCTTGTTTCCTTAACATTAATCATTCTTGGTCTTATTCCTCTTTACCATCCTTTTTAT
AGGTACCCTGCGAATTTAGTCGTAGACCATTCTTCTAAAATTACATCATCACTATCATAT
GGTACTACAACTAAGTACCAAAAGATAATAGAACAGGATGATGAAGACACGTGTGATGTA
TTCATTGGAGAGTGGGTTCATAATCCGGATGCTCCGTATTACACGAACTTGACATGTTGG
GCGATCCACGAACACCAAAATTGCATGAAATATGGGAGGCCGGATATTGACTTCTTGAAA
TGGAGATGGAAGCCTAAAGGGTGCGATCTACCAATTTTTAACCCGTATCAATTTTTGGAT
ATGATGAGAAATAAGTCTATGGCATTTATTGGAGATTCAGTCGGAAGAAATCAAATGCAG
TCTTTAATTTGCCTCTTGTCTCGGGTGGAATATCCGATTGATATTTCTTATGACACAGAT
CAAAATTTCAGAAGGTGGAAATACACGACATATAATTTCACCTTAGCAGCATATTGGTCA
CCATTTTTGGTCACGGTTAAAGAATCAGACCCTGATGGTCCTAGCCATACAGGACTTTTC
AATCTTTATCTTGATGAACCTGATCCAAAATGGACTACTCAAATTGAAAATGAACAATTC
AATTATTTGATCCTCAATTCTGCTCATTGGTACACAAGGTGCAGTATCTACTACGAAAAA
AATCAAATAATTGGGTGTCATTACTGTGGACTACCAAATATTACTGATCTCTCAATAAAT
TATGGCTATCAAAAAGCACTTAAAACAACTTTAAAAGCCATAAATAGTTTAGAGAATTTT
AAAGGTGTTACTTTTGTTAGGACAATTGCACCTTCTCATTTTGAAGGTGGTGAATGGAAT
AAAGGTGGAAATTGTGTGAGACAAGGTCCATTTAGAAGTAATGAGACAACATTGGATGGT
ATAAGTTTGGAATTTTATAGGACACAAGTTGAAGAATTTAAGATTGCAGCTAAGGAAGGG
AAGAAAAAAGGTAAAAGGTTTAGATTATTGGATATGACACAAGCAATGTTGTTGAGACCA
GATGGTCATCCTAGTAAATATGGACATTGGCCAAATGCTAATGTGGTTTTGTATAATGAT
TGTGTGCATTGGTGTTTGCCTGGTCCTATTGATACTTGGAGTGATTTCTTGCTTCATATG
TTGAAGTTAGAGGGAAGGAGAGCTCTTGAAGAAAGTCTTCAATTGAAATAA