Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068246
CDS Infomation

pacid=37465232 polypeptide=PGSC0003DMP400046100 locus=PGSC0003DMG400026530 ID=PGSC0003DMT400068246.v4.03 annot-version=v4.03
Sequence

ATGGGGGCTTCAGAAGCTGCCCTACAACTTTTATCCGGTACGCTTTCATTTCAAGTCCGA
ACAAGTTCAATCTTGGCGAAGTCAAACTCTTTACTTTGTTATGAACGTTGTTTTAAAGCT
AGAAATTGCGGGGACTGGAGGTATAAGCAGATAAAGGGTTTAAAAAAGCTGCAAGATTGC
TCGAGTTTACATGCTTTTCGTGGCTTACATAGTGTTTTCCGGGGTGAAAAGATTTATAAT
CGGTCCAATTTATCGATCTGCAATTGCCAACAACCTGAAAGAGTCAGTGAGACAATCATT
AAAGGTGGAAATGGAAAGTCAATGCACACTGTGCCTCCAAAGATTCCAAATCTTACTCCA
GATGAACAGAACATGAAGCAGGAAAATGGAGCTAGGCCTTTCAGTGAAGGTTTTAAAACT
GCTGCCTCAGTTAATAGTAGGCCTAGAACTAACACGGAGTCTATTGAGGATGAAGCGTGG
CATTTTTTGCGAGCTGCCATGGTTTATTACTGTGGCAGCCCAGTTGGAACTATAGCTGCT
AATGATCCAAGTGAAGCAACTATGCTAAACTATGATCAAGTATTTATACGTGATTTTATA
CCTTCTGGGATAGCATTCCTTCTAAAAGGAGAATATGATATCGTGAGGAACTTTATACTT
CACACGCTTCAGTTGCAGAGTTGGGAGAAAACAATGGATTGCTATAGTCCAGGTCAAGGA
CTTATGCCTGCCAGCTTCAAAGTGCGTACAATTCCACTTGATAATGACGAATCTGCAACT
GAAGATGTACTGGATCCAGACTTCGGCGAGGCAGCAATTGGTCGAGTCGCACCTGTGGAT
TCAGGATTATGGTGGATTATATTGTTGCGAGCATATGGGAAATGCTCTGGAGATCTTTCT
CTTCAGGAGAGGGTTGATGTCCAAACTGGAATGAAGATGATACTCAGGCTATGTCTTGCA
GATGGCTTTGATATGTTTCCCACTTTGCTGGTGACTGACGGTTCTTGCATGATAGATCGT
CGCATGGGAATCCATGGCCACCCTCTGGAAATTCAGGCGTTATATTATTCAGCCTTACTT
GGTGCACGGGAGATGCTTGCTCCAGAGGAGGCATCAACAGACCTTGTTAGGGCACTTAAC
AATCGTTTGCTAGCATTGTCATTTCATATTAGGGAATACTACTGGATCGATGTGAAAAAA
TTGAACGAGATTTATAGATACAAAACGGAGGAATATTCATACGATGCAATCAATAAGTTT
AATATATATCCAGATCAAATTCCTCCCTGGCTGGTGGAATGGATGCCTAGTGAAGGGGGT
TATCTTATAGGAAACCTGCAGCCAGCTCACATGGATTTCCGGTTCTTTTCACTTGGGAAC
GTTTGGTCCATCGTAAGCAGTCTTGCTAACATAGATCAGTCACATGCCATTTTAGATCTT
ATTGAAGCCAAATGGGAGGACTTAGTAGCTGATATGCCACTGAAGATATGTTATCCTGCT
CTTGAGGGCCAGGAATGGCGCATTATTACTGGTGGTGATCCGAAAAACACGCCTTGGTCT
TACCATAATGGAGGATCCTGGCCAACGTTGCTCTGGCAGCTGACTGTGGCATGCATAAAA
ATGAAGAGGCCTGAAATTGCTGAAAAAGCAATTAAGATCGCGGAAAGACGCTTATCCAGA
GATAGGTGGCCTGAATACTACGATACAAGGCGAGGAGGGTTCATTGGGAAACAGGCACGT
CTCTTTCAGACATGGACTATTGCAGGATATCTAGTGGCAAAGCTGCTTATTGCCAATCCA
GAGGCTGCAAAGATGGTAATCAATGTGGAGGATACAGAACTTCTAAGTGCTTTTTCAAGC
ATTCTGAGTTCAAATCCAAGACGAAAACGTTCACGAAAAGGAGTTAAACAGTCTTTCATC
ATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400046100
PEP Infomation

pacid=37465232 transcript=PGSC0003DMT400068246 locus=PGSC0003DMG400026530 ID=PGSC0003DMT400068246.v4.03 annot-version=v4.03
Sequence

MGASEAALQLLSGTLSFQVRTSSILAKSNSLLCYERCFKARNCGDWRYKQIKGLKKLQDC
SSLHAFRGLHSVFRGEKIYNRSNLSICNCQQPERVSETIIKGGNGKSMHTVPPKIPNLTP
DEQNMKQENGARPFSEGFKTAASVNSRPRTNTESIEDEAWHFLRAAMVYYCGSPVGTIAA
NDPSEATMLNYDQVFIRDFIPSGIAFLLKGEYDIVRNFILHTLQLQSWEKTMDCYSPGQG
LMPASFKVRTIPLDNDESATEDVLDPDFGEAAIGRVAPVDSGLWWIILLRAYGKCSGDLS
LQERVDVQTGMKMILRLCLADGFDMFPTLLVTDGSCMIDRRMGIHGHPLEIQALYYSALL
GAREMLAPEEASTDLVRALNNRLLALSFHIREYYWIDVKKLNEIYRYKTEEYSYDAINKF
NIYPDQIPPWLVEWMPSEGGYLIGNLQPAHMDFRFFSLGNVWSIVSSLANIDQSHAILDL
IEAKWEDLVADMPLKICYPALEGQEWRIITGGDPKNTPWSYHNGGSWPTLLWQLTVACIK
MKRPEIAEKAIKIAERRLSRDRWPEYYDTRRGGFIGKQARLFQTWTIAGYLVAKLLIANP
EAAKMVINVEDTELLSAFSSILSSNPRRKRSRKGVKQSFII*

Transcript Sequence

Transcript ID

PGSC0003DMT400068246
Transcript Infomation

pacid=37465232 locus=PGSC0003DMG400026530 ID=PGSC0003DMT400068246.v4.03 annot-version=v4.03
Sequence

ATGGGGGCTTCAGAAGCTGCCCTACAACTTTTATCCGGTACGCTTTCATTTCAAGTCCGA
ACAAGTTCAATCTTGGCGAAGTCAAACTCTTTACTTTGTTATGAACGTTGTTTTAAAGCT
AGAAATTGCGGGGACTGGAGGTATAAGCAGATAAAGGGTTTAAAAAAGCTGCAAGATTGC
TCGAGTTTACATGCTTTTCGTGGCTTACATAGTGTTTTCCGGGGTGAAAAGATTTATAAT
CGGTCCAATTTATCGATCTGCAATTGCCAACAACCTGAAAGAGTCAGTGAGACAATCATT
AAAGGTGGAAATGGAAAGTCAATGCACACTGTGCCTCCAAAGATTCCAAATCTTACTCCA
GATGAACAGAACATGAAGCAGGAAAATGGAGCTAGGCCTTTCAGTGAAGGTTTTAAAACT
GCTGCCTCAGTTAATAGTAGGCCTAGAACTAACACGGAGTCTATTGAGGATGAAGCGTGG
CATTTTTTGCGAGCTGCCATGGTTTATTACTGTGGCAGCCCAGTTGGAACTATAGCTGCT
AATGATCCAAGTGAAGCAACTATGCTAAACTATGATCAAGTATTTATACGTGATTTTATA
CCTTCTGGGATAGCATTCCTTCTAAAAGGAGAATATGATATCGTGAGGAACTTTATACTT
CACACGCTTCAGTTGCAGAGTTGGGAGAAAACAATGGATTGCTATAGTCCAGGTCAAGGA
CTTATGCCTGCCAGCTTCAAAGTGCGTACAATTCCACTTGATAATGACGAATCTGCAACT
GAAGATGTACTGGATCCAGACTTCGGCGAGGCAGCAATTGGTCGAGTCGCACCTGTGGAT
TCAGGATTATGGTGGATTATATTGTTGCGAGCATATGGGAAATGCTCTGGAGATCTTTCT
CTTCAGGAGAGGGTTGATGTCCAAACTGGAATGAAGATGATACTCAGGCTATGTCTTGCA
GATGGCTTTGATATGTTTCCCACTTTGCTGGTGACTGACGGTTCTTGCATGATAGATCGT
CGCATGGGAATCCATGGCCACCCTCTGGAAATTCAGGCGTTATATTATTCAGCCTTACTT
GGTGCACGGGAGATGCTTGCTCCAGAGGAGGCATCAACAGACCTTGTTAGGGCACTTAAC
AATCGTTTGCTAGCATTGTCATTTCATATTAGGGAATACTACTGGATCGATGTGAAAAAA
TTGAACGAGATTTATAGATACAAAACGGAGGAATATTCATACGATGCAATCAATAAGTTT
AATATATATCCAGATCAAATTCCTCCCTGGCTGGTGGAATGGATGCCTAGTGAAGGGGGT
TATCTTATAGGAAACCTGCAGCCAGCTCACATGGATTTCCGGTTCTTTTCACTTGGGAAC
GTTTGGTCCATCGTAAGCAGTCTTGCTAACATAGATCAGTCACATGCCATTTTAGATCTT
ATTGAAGCCAAATGGGAGGACTTAGTAGCTGATATGCCACTGAAGATATGTTATCCTGCT
CTTGAGGGCCAGGAATGGCGCATTATTACTGGTGGTGATCCGAAAAACACGCCTTGGTCT
TACCATAATGGAGGATCCTGGCCAACGTTGCTCTGGCAGCTGACTGTGGCATGCATAAAA
ATGAAGAGGCCTGAAATTGCTGAAAAAGCAATTAAGATCGCGGAAAGACGCTTATCCAGA
GATAGGTGGCCTGAATACTACGATACAAGGCGAGGAGGGTTCATTGGGAAACAGGCACGT
CTCTTTCAGACATGGACTATTGCAGGATATCTAGTGGCAAAGCTGCTTATTGCCAATCCA
GAGGCTGCAAAGATGGTAATCAATGTGGAGGATACAGAACTTCTAAGTGCTTTTTCAAGC
ATTCTGAGTTCAAATCCAAGACGAAAACGTTCACGAAAAGGAGTTAAACAGTCTTTCATC
ATATGA