Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068222
CDS Infomation

pacid=37465420 polypeptide=PGSC0003DMP400046085 locus=PGSC0003DMG400026523 ID=PGSC0003DMT400068222.v4.03 annot-version=v4.03
Sequence

ATGTCGACTGTTCAAGCAACTGCCGCGGACATAGCGGGGCAAATTGGGATGATGTGGGAA
GTGTTGAAAGCACCATTATTAGTACCATTGTTAAAAGCAGCAGTGTACATTTGCATAGCA
ATGGAATTAATGTTATTTGTTGAAAGATTATATATGGGAATAGTCATTGTTCTTGTTAAG
ATTTTTATGAAAAAACCAGATAAAAGGTATAAATGGATACCAATGGCTGATGATGATTTG
GAAATTGGAAGTGCTGATTTTCCTAAAGTTCTTGTACAAATTCCCATGTTCAATGAGAAA
GAGGTGTATAAGATTTCCATTGGAGCTGCGTGTAACCTTTCGTGGCCGTCTGATCGCCTT
GTGATTCAAGTTCTTGATGATTCTACTGATCCTATTGTTAAGGATATGGTTGAAACAGAA
TGTTTAAGATGGGAAAGTAAAGGACTTAATATAACGTATCAAATTAGAGAAACAAGAGGA
GGATACAAAGCTGGAGCACTTAAAGAAGGATTAAAGCATAATTATGTTAAAGATTGTGAA
TACGTCGTAATTTTCGATGCCGATTTTCGACCTGAACCGGATTTTCTCCGTAGATCAATC
CCATTTCTTATACATAACCCGGAAATCGCTCTTGTTCAGGGTCGATGGAGATTCGTGAAT
TCAAATGAGTGTTTATTGACAAGAATGCAAGAGATGTCACTAGATTACCATTTTACAGTG
GAGCAAGAAGTTGGCTCATCTACTCATGCATTCTTTGGTTTTAATGGGACTGGTGGGATA
TGGAGAATAGCAGCCATTGAAGAAGCTGGTGGATGGAAAGACAGAACAACTGTTGAAGAT
ATGGATCTTGCTGTTAGAGCTAGTCTTAAGGGATGGAAGTTTGTTTATCTTGGTGACCTC
CAGGTGAAAAGTGAACTTCCAAGTACCTTCAAAGCGTTCCGTTTTCAGCAGCATCGATGG
TCGTGTGGCCCAGCGAATTTGTTCAGGAAAATGGTGATGGAAATTGTCAGGAACAAGGTG
AGTTGCTCGAACTTTACAAAAATGTTGTTGGATCAGTGTCGGATCCTCCAAAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400046085
PEP Infomation

pacid=37465420 transcript=PGSC0003DMT400068222 locus=PGSC0003DMG400026523 ID=PGSC0003DMT400068222.v4.03 annot-version=v4.03
Sequence

MSTVQATAADIAGQIGMMWEVLKAPLLVPLLKAAVYICIAMELMLFVERLYMGIVIVLVK
IFMKKPDKRYKWIPMADDDLEIGSADFPKVLVQIPMFNEKEVYKISIGAACNLSWPSDRL
VIQVLDDSTDPIVKDMVETECLRWESKGLNITYQIRETRGGYKAGALKEGLKHNYVKDCE
YVVIFDADFRPEPDFLRRSIPFLIHNPEIALVQGRWRFVNSNECLLTRMQEMSLDYHFTV
EQEVGSSTHAFFGFNGTGGIWRIAAIEEAGGWKDRTTVEDMDLAVRASLKGWKFVYLGDL
QVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIVRNKVSCSNFTKMLLDQCRILQK*

Transcript Sequence

Transcript ID

PGSC0003DMT400068222
Transcript Infomation

pacid=37465420 locus=PGSC0003DMG400026523 ID=PGSC0003DMT400068222.v4.03 annot-version=v4.03
Sequence

ATGTCGACTGTTCAAGCAACTGCCGCGGACATAGCGGGGCAAATTGGGATGATGTGGGAA
GTGTTGAAAGCACCATTATTAGTACCATTGTTAAAAGCAGCAGTGTACATTTGCATAGCA
ATGGAATTAATGTTATTTGTTGAAAGATTATATATGGGAATAGTCATTGTTCTTGTTAAG
ATTTTTATGAAAAAACCAGATAAAAGGTATAAATGGATACCAATGGCTGATGATGATTTG
GAAATTGGAAGTGCTGATTTTCCTAAAGTTCTTGTACAAATTCCCATGTTCAATGAGAAA
GAGGTGTATAAGATTTCCATTGGAGCTGCGTGTAACCTTTCGTGGCCGTCTGATCGCCTT
GTGATTCAAGTTCTTGATGATTCTACTGATCCTATTGTTAAGGATATGGTTGAAACAGAA
TGTTTAAGATGGGAAAGTAAAGGACTTAATATAACGTATCAAATTAGAGAAACAAGAGGA
GGATACAAAGCTGGAGCACTTAAAGAAGGATTAAAGCATAATTATGTTAAAGATTGTGAA
TACGTCGTAATTTTCGATGCCGATTTTCGACCTGAACCGGATTTTCTCCGTAGATCAATC
CCATTTCTTATACATAACCCGGAAATCGCTCTTGTTCAGGGTCGATGGAGATTCGTGAAT
TCAAATGAGTGTTTATTGACAAGAATGCAAGAGATGTCACTAGATTACCATTTTACAGTG
GAGCAAGAAGTTGGCTCATCTACTCATGCATTCTTTGGTTTTAATGGGACTGGTGGGATA
TGGAGAATAGCAGCCATTGAAGAAGCTGGTGGATGGAAAGACAGAACAACTGTTGAAGAT
ATGGATCTTGCTGTTAGAGCTAGTCTTAAGGGATGGAAGTTTGTTTATCTTGGTGACCTC
CAGGTGAAAAGTGAACTTCCAAGTACCTTCAAAGCGTTCCGTTTTCAGCAGCATCGATGG
TCGTGTGGCCCAGCGAATTTGTTCAGGAAAATGGTGATGGAAATTGTCAGGAACAAGGTG
AGTTGCTCGAACTTTACAAAAATGTTGTTGGATCAGTGTCGGATCCTCCAAAAGTAG