Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400068077
CDS Infomation

pacid=37461078 polypeptide=PGSC0003DMP400045990 locus=PGSC0003DMG400026477 ID=PGSC0003DMT400068077.v4.03 annot-version=v4.03
Sequence

ATGGAGAATTCAAGTCAAGAATCGCATCTCCGATCTGAAAATTCCGTTACATATGACTCC
TCTTACCCGATCTACGCTATGGCTTTTTCATCCTTCAATTCTTCCCTCACAAACCGCTGC
CGTCGACTTGCTGTCGGAAGCTTTATCGAAGAGTTCAACAATCGTGTTGATATTCTCTCT
TTCGATGAAGATACCCTAACCCTTAAGCCTGTTCCAAATCTCTCTTTCGAACACCCTTAT
CCGCCTACAAAGCTCATGTTTCATCCTAATCCTTCTGCTTCTCTCAAGACTAATGATATT
CTTGCCTCTTCCGGTGACTACCTCCGTCTCTGGGATGTTACTGATACTTCTATTGAACCA
CTTTTCACTCTCAGTAACAATAAAACTAGTGAATACTGTGCTCCTTTGACGTCTTTTGAT
TGGAATGAAGTGGAGCCGAGAAGAATTGGTACTTCTAGTATAGACACTACTTGTACCATC
TGGGATGTTGAAAAAGGAGTTGTGGAAACCCAATTGATAGCCCATGACAAAGAGGTTTAC
GATATAGCTTGGGGTGAAGCTGGAGTTTTTGCGTCCGTTTCTGCTGATGGATCAGTTAGG
ATTTTTGATTTGAGAGATAAGGAACATTCAACGATTATTTATGAGAGTCCGAAACCGGAT
ACTCCATTGTTGAGGTTGGCTTGGAACAAGCAAGATTTGAGATACATGGCTACCATATTG
ATGGATAGCAACAAGATTGTGATTTTAGATATTAGGTCTCCAGCAATGCCTGTGGCAGAA
CTGGACAGGCATCAGGCGAGTGTGAATGCCATTGCTTGGGCTCCGCAGAGCTGTAGACAT
ATTTGTTCTGCTGGGGATGACGGGCAGGCACTCATTTGGGAGTTGCCAACTGTTGCAGGG
CCTAATGGGATTGATCCTATGACAGTGTACTCTGCTGGAGCTGAGATTAATCAAATTCAG
TGGTCTGCTGCACATCGTGATTGGATTGCCATTGCGTTTTCTAACAAGTTGCAGCTGCTT
AAAGTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400045990
PEP Infomation

pacid=37461078 transcript=PGSC0003DMT400068077 locus=PGSC0003DMG400026477 ID=PGSC0003DMT400068077.v4.03 annot-version=v4.03
Sequence

MENSSQESHLRSENSVTYDSSYPIYAMAFSSFNSSLTNRCRRLAVGSFIEEFNNRVDILS
FDEDTLTLKPVPNLSFEHPYPPTKLMFHPNPSASLKTNDILASSGDYLRLWDVTDTSIEP
LFTLSNNKTSEYCAPLTSFDWNEVEPRRIGTSSIDTTCTIWDVEKGVVETQLIAHDKEVY
DIAWGEAGVFASVSADGSVRIFDLRDKEHSTIIYESPKPDTPLLRLAWNKQDLRYMATIL
MDSNKIVILDIRSPAMPVAELDRHQASVNAIAWAPQSCRHICSAGDDGQALIWELPTVAG
PNGIDPMTVYSAGAEINQIQWSAAHRDWIAIAFSNKLQLLKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400068077
Transcript Infomation

pacid=37461078 locus=PGSC0003DMG400026477 ID=PGSC0003DMT400068077.v4.03 annot-version=v4.03
Sequence

ATGGAGAATTCAAGTCAAGAATCGCATCTCCGATCTGAAAATTCCGTTACATATGACTCC
TCTTACCCGATCTACGCTATGGCTTTTTCATCCTTCAATTCTTCCCTCACAAACCGCTGC
CGTCGACTTGCTGTCGGAAGCTTTATCGAAGAGTTCAACAATCGTGTTGATATTCTCTCT
TTCGATGAAGATACCCTAACCCTTAAGCCTGTTCCAAATCTCTCTTTCGAACACCCTTAT
CCGCCTACAAAGCTCATGTTTCATCCTAATCCTTCTGCTTCTCTCAAGACTAATGATATT
CTTGCCTCTTCCGGTGACTACCTCCGTCTCTGGGATGTTACTGATACTTCTATTGAACCA
CTTTTCACTCTCAGTAACAATAAAACTAGTGAATACTGTGCTCCTTTGACGTCTTTTGAT
TGGAATGAAGTGGAGCCGAGAAGAATTGGTACTTCTAGTATAGACACTACTTGTACCATC
TGGGATGTTGAAAAAGGAGTTGTGGAAACCCAATTGATAGCCCATGACAAAGAGGTTTAC
GATATAGCTTGGGGTGAAGCTGGAGTTTTTGCGTCCGTTTCTGCTGATGGATCAGTTAGG
ATTTTTGATTTGAGAGATAAGGAACATTCAACGATTATTTATGAGAGTCCGAAACCGGAT
ACTCCATTGTTGAGGTTGGCTTGGAACAAGCAAGATTTGAGATACATGGCTACCATATTG
ATGGATAGCAACAAGATTGTGATTTTAGATATTAGGTCTCCAGCAATGCCTGTGGCAGAA
CTGGACAGGCATCAGGCGAGTGTGAATGCCATTGCTTGGGCTCCGCAGAGCTGTAGACAT
ATTTGTTCTGCTGGGGATGACGGGCAGGCACTCATTTGGGAGTTGCCAACTGTTGCAGGG
CCTAATGGGATTGATCCTATGACAGTGTACTCTGCTGGAGCTGAGATTAATCAAATTCAG
TGGTCTGCTGCACATCGTGATTGGATTGCCATTGCGTTTTCTAACAAGTTGCAGCTGCTT
AAAGTATAA