Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067957
CDS Infomation

pacid=37457615 polypeptide=PGSC0003DMP400045896 locus=PGSC0003DMG400026430 ID=PGSC0003DMT400067957.v4.03 annot-version=v4.03
Sequence

ATGTATTTTGGTGGGACAAATTTTGGCCGGACTGCTGGTGGCCCAACTCAAATCACTAGC
TATGATTATGATGCTCCACTTGATGAATATGGACTACTACGTCAACCTAAATGGGGCCAT
TTGAAGGATCTGCATGCTGCTATAAAGCTTTGTGAACCTGCTCTTGTTGCTGCTGATTCA
CCTCAGTATATTAAACTGGGACCAAACCAGGAGGCACATGTCTATCGTGGAACATCCCAC
AACATTGGCCAATATATTTCCTTGAATGAAGGCATATGTGCAGCATTTATTGCAAATATT
GATGAACATGAATCAGCAACAGTGAAATTTTACGATCAAGAGTATACTTTACCTCCATGG
TCAGTGAGTATTCTGCCAGATTGCAGAAACACAGCTTTCAACACAGCTAAGGTGGGGGCA
CAAACTTCAATCAAAACAGTGGGCTCTGATTCTGTTTCAGTTGGGAAAAATTCTTTGTTT
CCACAAGTAATCACTAAAAGCAAGCTCGAAAGTATTTCACAATCTTGGATGACATTGAAA
GAGCCACTTGGTGTGTGGGGTGACAAGAATTTCACTTCTAAAGGAATACTGGAGCATCTG
AATGTGACAAAAGACCAGTCTGATTACCTGTGGTATCTGACCAGGATATATATCTCTGAT
GATGACATCTCATTTTGGGAGGAAAATGATGTTAGTCCAACAATTGATATTGATAGCATG
CGTGATTTTGTTCGCATTTTTGTTAATGGGCAGCTTGCAGGTAGTGTGAAAGGCAAATGG
ATCAAGGTGGTTCAACCTGTTAAGCTGGTTCAGGGATACAACGACATACTGCTATTATCT
GAGACGGTGGGATTGCAGAATTATGGTGCCTTCTTAGAAAAGGATGGGGGAGGTTTTAAA
GGTCAGATAAAGCTTACAGGATGCAAAAGCGGGGATATCAATCTCACAACATCTTTATGG
ACCTACCAGGTGGGGCTTAAAGGCGAATTCCTGAAAGTATATGATGTCAATAGTACTGAA
AGTACAGGATGGACTGAGTTTCCCAGTGGTGCAACTCCGTCAGTCTTTTCGTGGTACAAG
ACAAAGTTTGATGCCCCAGGCGGGACAGATCCAGTTGCTCTTGATTTTAGTAGCATGGGA
AAAGGTCAGGCATGGGTTAATGGTCACCATATAGGAAGATATTGGACTTTGGTTGCACCA
AATAATGGATGTGGAAGAACTTGTGATTATCGTGGTGCTTACGACTCTGATAAATGTAGG
ACAAACTGTGGAGAGATTACTCAGGCCTGGTACCATATACCTAGATCATGGCTAAAGACA
TCTAATAATGTACTAGTTATCTTTGAAGAAACGGATAGAACTCCATTTGACATTTCCATT
TCTATGCGTTCTACTGAAACCATATGTGCTCAAGTATCGGAAAAGCACTATCCACCTCTA
CATAAGTGGTCTCTTTCAGAGTCCGACAGAAAGTTGTCTCTGATGGATAAAACACCAGAA
ATGCACTTGCAGTGTGACGAAGGACATACAATCTCTTCTATCGAATTTGCAAGCTATGGA
AGTCCGAATGGCAGCTGTCAAAAGTTCTCACAAGGCAAATGCCATGCTGCAAATTCCTTG
TCTGTTGTATCTCAGGCTTGTATAGGAAGAACTAGTTGCAGCATTGGCATTTCCAATGGT
GTATTTGGAGATCCATGTCGACACGTTGTGAAGAGTTTGGCTGTTCAAGCAAAATGCTCA
CCACCACCAGATCTCAGCACTTCAGCTTCCTCGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045896
PEP Infomation

pacid=37457615 transcript=PGSC0003DMT400067957 locus=PGSC0003DMG400026430 ID=PGSC0003DMT400067957.v4.03 annot-version=v4.03
Sequence

MYFGGTNFGRTAGGPTQITSYDYDAPLDEYGLLRQPKWGHLKDLHAAIKLCEPALVAADS
PQYIKLGPNQEAHVYRGTSHNIGQYISLNEGICAAFIANIDEHESATVKFYDQEYTLPPW
SVSILPDCRNTAFNTAKVGAQTSIKTVGSDSVSVGKNSLFPQVITKSKLESISQSWMTLK
EPLGVWGDKNFTSKGILEHLNVTKDQSDYLWYLTRIYISDDDISFWEENDVSPTIDIDSM
RDFVRIFVNGQLAGSVKGKWIKVVQPVKLVQGYNDILLLSETVGLQNYGAFLEKDGGGFK
GQIKLTGCKSGDINLTTSLWTYQVGLKGEFLKVYDVNSTESTGWTEFPSGATPSVFSWYK
TKFDAPGGTDPVALDFSSMGKGQAWVNGHHIGRYWTLVAPNNGCGRTCDYRGAYDSDKCR
TNCGEITQAWYHIPRSWLKTSNNVLVIFEETDRTPFDISISMRSTETICAQVSEKHYPPL
HKWSLSESDRKLSLMDKTPEMHLQCDEGHTISSIEFASYGSPNGSCQKFSQGKCHAANSL
SVVSQACIGRTSCSIGISNGVFGDPCRHVVKSLAVQAKCSPPPDLSTSASS*

Transcript Sequence

Transcript ID

PGSC0003DMT400067957
Transcript Infomation

pacid=37457615 locus=PGSC0003DMG400026430 ID=PGSC0003DMT400067957.v4.03 annot-version=v4.03
Sequence

ATGTATTTTGGTGGGACAAATTTTGGCCGGACTGCTGGTGGCCCAACTCAAATCACTAGC
TATGATTATGATGCTCCACTTGATGAATATGGACTACTACGTCAACCTAAATGGGGCCAT
TTGAAGGATCTGCATGCTGCTATAAAGCTTTGTGAACCTGCTCTTGTTGCTGCTGATTCA
CCTCAGTATATTAAACTGGGACCAAACCAGGAGGCACATGTCTATCGTGGAACATCCCAC
AACATTGGCCAATATATTTCCTTGAATGAAGGCATATGTGCAGCATTTATTGCAAATATT
GATGAACATGAATCAGCAACAGTGAAATTTTACGATCAAGAGTATACTTTACCTCCATGG
TCAGTGAGTATTCTGCCAGATTGCAGAAACACAGCTTTCAACACAGCTAAGGTGGGGGCA
CAAACTTCAATCAAAACAGTGGGCTCTGATTCTGTTTCAGTTGGGAAAAATTCTTTGTTT
CCACAAGTAATCACTAAAAGCAAGCTCGAAAGTATTTCACAATCTTGGATGACATTGAAA
GAGCCACTTGGTGTGTGGGGTGACAAGAATTTCACTTCTAAAGGAATACTGGAGCATCTG
AATGTGACAAAAGACCAGTCTGATTACCTGTGGTATCTGACCAGGATATATATCTCTGAT
GATGACATCTCATTTTGGGAGGAAAATGATGTTAGTCCAACAATTGATATTGATAGCATG
CGTGATTTTGTTCGCATTTTTGTTAATGGGCAGCTTGCAGGTAGTGTGAAAGGCAAATGG
ATCAAGGTGGTTCAACCTGTTAAGCTGGTTCAGGGATACAACGACATACTGCTATTATCT
GAGACGGTGGGATTGCAGAATTATGGTGCCTTCTTAGAAAAGGATGGGGGAGGTTTTAAA
GGTCAGATAAAGCTTACAGGATGCAAAAGCGGGGATATCAATCTCACAACATCTTTATGG
ACCTACCAGGTGGGGCTTAAAGGCGAATTCCTGAAAGTATATGATGTCAATAGTACTGAA
AGTACAGGATGGACTGAGTTTCCCAGTGGTGCAACTCCGTCAGTCTTTTCGTGGTACAAG
ACAAAGTTTGATGCCCCAGGCGGGACAGATCCAGTTGCTCTTGATTTTAGTAGCATGGGA
AAAGGTCAGGCATGGGTTAATGGTCACCATATAGGAAGATATTGGACTTTGGTTGCACCA
AATAATGGATGTGGAAGAACTTGTGATTATCGTGGTGCTTACGACTCTGATAAATGTAGG
ACAAACTGTGGAGAGATTACTCAGGCCTGGTACCATATACCTAGATCATGGCTAAAGACA
TCTAATAATGTACTAGTTATCTTTGAAGAAACGGATAGAACTCCATTTGACATTTCCATT
TCTATGCGTTCTACTGAAACCATATGTGCTCAAGTATCGGAAAAGCACTATCCACCTCTA
CATAAGTGGTCTCTTTCAGAGTCCGACAGAAAGTTGTCTCTGATGGATAAAACACCAGAA
ATGCACTTGCAGTGTGACGAAGGACATACAATCTCTTCTATCGAATTTGCAAGCTATGGA
AGTCCGAATGGCAGCTGTCAAAAGTTCTCACAAGGCAAATGCCATGCTGCAAATTCCTTG
TCTGTTGTATCTCAGGCTTGTATAGGAAGAACTAGTTGCAGCATTGGCATTTCCAATGGT
GTATTTGGAGATCCATGTCGACACGTTGTGAAGAGTTTGGCTGTTCAAGCAAAATGCTCA
CCACCACCAGATCTCAGCACTTCAGCTTCCTCGTGA