Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067936
CDS Infomation

pacid=37456274 polypeptide=PGSC0003DMP400045880 locus=PGSC0003DMG400026425 ID=PGSC0003DMT400067936.v4.03 annot-version=v4.03
Sequence

ATGGATTATGATCTATTGAGTGAGAAAAAGGCGTTTGATGATTCAAAAGCCGGTGTTAAA
GGACTAGTTGATGCTGGAATAGTCGATATTCCACGAATTTTCATTAGGCCACCTGATGAA
CTTGTTGATGAATTGAATCAATGCAAGTTACAGGTTCCAGTTGTGGATTTCAGTGGCATA
GAAATTCAGGATCGGCGTAAGAAGATAGTTGATGAAATGAAGGAAGCATCAGAGAAGTGG
GGATTTTTCCAGCTGATAAATCACGGGGTTCCTTCGAGTGTTTTGGAAGGAATGATTGAT
GGTACTCGTAAATTTCATGAGCAAGATGTTGAAGTAAAGAAAGAGTACTATTCGCGTGAT
AGAACAACACGAAGAGTTAGATATGAGAGCAATCTTCATTTGTATCAATCACACACCGCG
AATTGGAGGGATACATTGAACATTTCTATGATTGCTACTGGTCATATTGAACCTGAAGAA
ATACCGGTAGTTTGCAGGAATGCATCCATTGAGTACATCAATCATGTTAGAAAACTTGGA
GACACACTTCTTGGCTTACTATCAGAAGCTCTTGGGCTAAAATCGGACTACTTGAAAGCG
ATGGAATGTGACAAAGGTAAAACATTGGTATGCCATTACTACCCGGCATGCCCACAGCCA
GAGCTAACTCTTGGTACCGATAAGCACACAGATCCTGATTTTCTCACCATTCTGCTACAA
GATCAAAGTGGTGGCGCCCTGCAAGTTGTGCATGATAACCAATGGGTCGATGTTGAACCA
ATTGAAGGAGGCTTGGTTGTTAATATTGGTGACTTTCTTCGGATCCTATCAAATGACAAG
TTTGTAAGTGTAAATCATAGAGTTGTAGCAAATAAGATAGGACCAAGGATATCAGTGGCA
TGCTTCTTCCATGGTGCTTTTGAACCTCCAAAGATGTATGGTCCAATTAAAGAGCTCATA
TCAGAAGAAAATCCCCTCCTGTATAAAGAGTTTCTTGTGAAAGATTACATGGCTAAGTTT
TTCTCCAGGCCAGTTCATAAGTCTGGTCTTGATCTTCTAAGAATGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045880
PEP Infomation

pacid=37456274 transcript=PGSC0003DMT400067936 locus=PGSC0003DMG400026425 ID=PGSC0003DMT400067936.v4.03 annot-version=v4.03
Sequence

MDYDLLSEKKAFDDSKAGVKGLVDAGIVDIPRIFIRPPDELVDELNQCKLQVPVVDFSGI
EIQDRRKKIVDEMKEASEKWGFFQLINHGVPSSVLEGMIDGTRKFHEQDVEVKKEYYSRD
RTTRRVRYESNLHLYQSHTANWRDTLNISMIATGHIEPEEIPVVCRNASIEYINHVRKLG
DTLLGLLSEALGLKSDYLKAMECDKGKTLVCHYYPACPQPELTLGTDKHTDPDFLTILLQ
DQSGGALQVVHDNQWVDVEPIEGGLVVNIGDFLRILSNDKFVSVNHRVVANKIGPRISVA
CFFHGAFEPPKMYGPIKELISEENPLLYKEFLVKDYMAKFFSRPVHKSGLDLLRM*

Transcript Sequence

Transcript ID

PGSC0003DMT400067936
Transcript Infomation

pacid=37456274 locus=PGSC0003DMG400026425 ID=PGSC0003DMT400067936.v4.03 annot-version=v4.03
Sequence

ATGGATTATGATCTATTGAGTGAGAAAAAGGCGTTTGATGATTCAAAAGCCGGTGTTAAA
GGACTAGTTGATGCTGGAATAGTCGATATTCCACGAATTTTCATTAGGCCACCTGATGAA
CTTGTTGATGAATTGAATCAATGCAAGTTACAGGTTCCAGTTGTGGATTTCAGTGGCATA
GAAATTCAGGATCGGCGTAAGAAGATAGTTGATGAAATGAAGGAAGCATCAGAGAAGTGG
GGATTTTTCCAGCTGATAAATCACGGGGTTCCTTCGAGTGTTTTGGAAGGAATGATTGAT
GGTACTCGTAAATTTCATGAGCAAGATGTTGAAGTAAAGAAAGAGTACTATTCGCGTGAT
AGAACAACACGAAGAGTTAGATATGAGAGCAATCTTCATTTGTATCAATCACACACCGCG
AATTGGAGGGATACATTGAACATTTCTATGATTGCTACTGGTCATATTGAACCTGAAGAA
ATACCGGTAGTTTGCAGGAATGCATCCATTGAGTACATCAATCATGTTAGAAAACTTGGA
GACACACTTCTTGGCTTACTATCAGAAGCTCTTGGGCTAAAATCGGACTACTTGAAAGCG
ATGGAATGTGACAAAGGTAAAACATTGGTATGCCATTACTACCCGGCATGCCCACAGCCA
GAGCTAACTCTTGGTACCGATAAGCACACAGATCCTGATTTTCTCACCATTCTGCTACAA
GATCAAAGTGGTGGCGCCCTGCAAGTTGTGCATGATAACCAATGGGTCGATGTTGAACCA
ATTGAAGGAGGCTTGGTTGTTAATATTGGTGACTTTCTTCGGATCCTATCAAATGACAAG
TTTGTAAGTGTAAATCATAGAGTTGTAGCAAATAAGATAGGACCAAGGATATCAGTGGCA
TGCTTCTTCCATGGTGCTTTTGAACCTCCAAAGATGTATGGTCCAATTAAAGAGCTCATA
TCAGAAGAAAATCCCCTCCTGTATAAAGAGTTTCTTGTGAAAGATTACATGGCTAAGTTT
TTCTCCAGGCCAGTTCATAAGTCTGGTCTTGATCTTCTAAGAATGTGA