Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067888
CDS Infomation

pacid=37426825 polypeptide=PGSC0003DMP400045839 locus=PGSC0003DMG400026405 ID=PGSC0003DMT400067888.v4.03 annot-version=v4.03
Sequence

ATGGCCGAAACAATTTGTAGAGCTCTTCGTGATGGAGCATTCGAAGGAGAACACGCTCCT
GCTCTAACTATAAAGGATACTATCGACACGCCTCTCGGTTCCTTCGTCTTCAACCATATT
CTTACGCAACTTACTTCCAACATTCTCGCCGGTAAATCACAAGCTCGAGGTGTTGTGCTG
GTCGCTTTATCACGGCCTCCATCGTTCTATGCTGAACTGTTGAAGGATAAAGGTTTCGAC
GTTTCTTCATCGAGTAAATGGCTAAGAGTTCTAGATTGCTATTCGGATCCTCTTGGATGG
AAAAACAAGTTAATGGAGAAGGGAACTGTAAGAAATCCCTACGAAGAGACTTCACTGAAA
ACTAGTTTATGTAAGAACTTGAAAGAATTGGACAAGGTTTTATCTTCCATTATTGAACTT
GGAAAAGAAATTGTTGAAGAGGGAAAAGGGAGATTTGCAGTTGCGATAGACTCGGTTAGT
GAGGTCTTGCGACATTCATCTCTGCCTTCCGTTGCAAGAATCTTAAGTCATCTTCGCAGT
CATGACCAGGTCTCATGCATATTTTGCTTGTTGCATGTGGACCTTCATGAGGCCAAGGTG
GCTGCCACTCTTGAATATTTGTCCACTATGCATGCGGATGTGGAACCAATAGTTCAAAGA
ACAAATGGACAGAGAAACACCTCAGAGGACCTCCCAATGGTGGAACAGTCCTTTAAAAGA
GGAAAATTTCACGTACGCTTTAAACGCAGAAATGGACGTGTCAGAGTGATGAGGGAAGAG
CTTTATGTTGAGGGATCAGGCATCAAAATTACAGATGTTTCATCTGAAGATGGAATCACT
GCCCAAAGTCTTGTTCCCAAGGTGCAATTCAATTTAGATTTGTCAGACAAGGAAAGATTA
GACCGAGCAAAAGTTGTACTCCCATTTGAACACCAAGGAACTGGTAAACCCATTCAAATC
TATGATGGTCGTAAATCACTTAACGAGAGCGAAAATGAGGAGAAACAAGCTTCAGTTGAG
AAACCGCAAACAACAGAGGATTCTGGGAGGGGTGAGATAATATATTTTCGCGATTCAGAT
GATGAGATGCCAGATTCAGATGAGGACCCTGATGATGATTTGGATATATGA

Peptide Sequence

PEP ID

PGSC0003DMP400045839
PEP Infomation

pacid=37426825 transcript=PGSC0003DMT400067888 locus=PGSC0003DMG400026405 ID=PGSC0003DMT400067888.v4.03 annot-version=v4.03
Sequence

MAETICRALRDGAFEGEHAPALTIKDTIDTPLGSFVFNHILTQLTSNILAGKSQARGVVL
VALSRPPSFYAELLKDKGFDVSSSSKWLRVLDCYSDPLGWKNKLMEKGTVRNPYEETSLK
TSLCKNLKELDKVLSSIIELGKEIVEEGKGRFAVAIDSVSEVLRHSSLPSVARILSHLRS
HDQVSCIFCLLHVDLHEAKVAATLEYLSTMHADVEPIVQRTNGQRNTSEDLPMVEQSFKR
GKFHVRFKRRNGRVRVMREELYVEGSGIKITDVSSEDGITAQSLVPKVQFNLDLSDKERL
DRAKVVLPFEHQGTGKPIQIYDGRKSLNESENEEKQASVEKPQTTEDSGRGEIIYFRDSD
DEMPDSDEDPDDDLDI*

Transcript Sequence

Transcript ID

PGSC0003DMT400067888
Transcript Infomation

pacid=37426825 locus=PGSC0003DMG400026405 ID=PGSC0003DMT400067888.v4.03 annot-version=v4.03
Sequence

ATGGCCGAAACAATTTGTAGAGCTCTTCGTGATGGAGCATTCGAAGGAGAACACGCTCCT
GCTCTAACTATAAAGGATACTATCGACACGCCTCTCGGTTCCTTCGTCTTCAACCATATT
CTTACGCAACTTACTTCCAACATTCTCGCCGGTAAATCACAAGCTCGAGGTGTTGTGCTG
GTCGCTTTATCACGGCCTCCATCGTTCTATGCTGAACTGTTGAAGGATAAAGGTTTCGAC
GTTTCTTCATCGAGTAAATGGCTAAGAGTTCTAGATTGCTATTCGGATCCTCTTGGATGG
AAAAACAAGTTAATGGAGAAGGGAACTGTAAGAAATCCCTACGAAGAGACTTCACTGAAA
ACTAGTTTATGTAAGAACTTGAAAGAATTGGACAAGGTTTTATCTTCCATTATTGAACTT
GGAAAAGAAATTGTTGAAGAGGGAAAAGGGAGATTTGCAGTTGCGATAGACTCGGTTAGT
GAGGTCTTGCGACATTCATCTCTGCCTTCCGTTGCAAGAATCTTAAGTCATCTTCGCAGT
CATGACCAGGTCTCATGCATATTTTGCTTGTTGCATGTGGACCTTCATGAGGCCAAGGTG
GCTGCCACTCTTGAATATTTGTCCACTATGCATGCGGATGTGGAACCAATAGTTCAAAGA
ACAAATGGACAGAGAAACACCTCAGAGGACCTCCCAATGGTGGAACAGTCCTTTAAAAGA
GGAAAATTTCACGTACGCTTTAAACGCAGAAATGGACGTGTCAGAGTGATGAGGGAAGAG
CTTTATGTTGAGGGATCAGGCATCAAAATTACAGATGTTTCATCTGAAGATGGAATCACT
GCCCAAAGTCTTGTTCCCAAGGTGCAATTCAATTTAGATTTGTCAGACAAGGAAAGATTA
GACCGAGCAAAAGTTGTACTCCCATTTGAACACCAAGGAACTGGTAAACCCATTCAAATC
TATGATGGTCGTAAATCACTTAACGAGAGCGAAAATGAGGAGAAACAAGCTTCAGTTGAG
AAACCGCAAACAACAGAGGATTCTGGGAGGGGTGAGATAATATATTTTCGCGATTCAGAT
GATGAGATGCCAGATTCAGATGAGGACCCTGATGATGATTTGGATATATGA