Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067879
CDS Infomation

pacid=37424221 polypeptide=PGSC0003DMP400045830 locus=PGSC0003DMG401026400 ID=PGSC0003DMT400067879.v4.03 annot-version=v4.03
Sequence

ATGTCTGCTCCTTTGGTTCTCGCTCCCAATTCGAATACCCTCTGTTATCACCATTCCAAT
TCTTTTATCAACCAAAAAACTCTTCTCTTTTCCAAATCTTTCAATTCTAAATTTACCAGC
TTTTCCTCTCAATACAATGATAATAATAATCCCATCAAGAACGAGGAGCAATACAATCTT
GAATTTGAAAATCAAGATTATGGGTCATCAAGTTCAGGAATTAAAGGCCCTACTGCTCCA
TGGATGAGGGGTCCTCTTCTTCTTGAACCTAATCAATTTTTGGACTTATCCAAATCCAGA
AAGAAGAAAGATGCCAATTTCGCTAAAACCCAAAATCCTAATGATGCACTTTCTGGTAAA
GTTAGTGGAGGAAGAGGTAAAAAAGCAATGAAGATGATTTATCAAGGAATTGATAAACTC
CAAGAAACGCAAATTGGGGAAGGTACACAGGTGGAAACTGATGCAAAGGTTGAATTTCAG
TTCCCACCAGGATCTTTATCTGAATGGGGAGATGTGAGTTATGAAATTGAGGAGAAAAAC
CCATATGGGGAGGAGGACAATGTGGAAAGCCTTGAGGGAGTGGAATTTGGTGTTTTATCA
AGAGAGGGGGAAGGAAGAGGGAGTAGAAAAATTGGGGTGAAAATGCCTTGGGAGAGTGAG
GTGAGAATTGTGTATAGGAGAATGAAGAAGGAGAAAGTTGTCATGACTGCAGAGTCGAAT
CTTGATGCAATGTTGCTTGAGAGATTGAGGGGTGAGGCTGCAAGGATTCAGAAGTGGGTG
AAGGTTAAGAAAGCCGGAGTTACCCGAACTGTTGTTGATCAAATCCACTTTATTTGGAAG
AATAATGAACTTGCAATGCTCAAATTTGACCTGCCTTTATGCCGTAATATGGACAGAGCT
CGAGAAATTGTCGAGATGAAGACTGGAGGCTTTGTTGTTTGGATGAAGCAAAATGCTCTG
GTTGTTTATAGAGGATGTAGCTATACTTTACAACAGAAGGAGCTACAGCATGATTTTCTA
TGTAGTCACCAGAACTCTTCATTTACTGAAAATATTAAACAGACAAGTATTTTCTCACCA
TTGAACTCAAGTGGGAGCAGTGAAGATGAAATGATAAGTGTTGGAAACTCAGAAGAGGAT
AGCCTAGCAATGAATGAGTCACTTTATGTGAGGGAAGCTAATAGATTGTTGGATGACTTA
GGACCTCGTTATGTTGATTGGTGGTGGCCAAAGCCTTTGCCTGTGAATGCGGATTTACTT
CCTGAAGTAGTTCCTGGATTTAAGCCACCATTTAGACTTTGCCCACCACGTTCAAGATCA
AAGCTGACAGATGATGAACTTACACAATTAAGGAAACTTGCTCGTTCTTTGCCAACTCAT
TTTGTTCTTGGGAGAAACAGAAAACTGCAAGGCTTGGCTGCAGCAGTCGTAAAGTTGTGG
GAGAAATGTCATATAGCAAAGATAGCTTTGAAGTGGGGAATTCCAAATACTAGCAATGAA
CTAATGGCAAATGAGTTAAAGTATCTTACAGGAGGAGTCCTTCTATTGCGGAATAAGTTC
TTTATAATCCTATACAGAGGCAAGGATTTTCTTCCTTCTCAAGTTGCAAACCTTGTAGCT
GAAAGGGAGGTGGAGCTCACAAGATGTCAGCTTGAGGAAGAAGTTGCACGATTCAAAGCA
ATTGAAACTCTTCCAATCACTATGGAAGTATCAATGAGCAGTAGTAGTGTTGGGACTTTA
TCAGAATTCCAGACAATTGCAGAACCTGGAAAGGAGAAATCTGAGGTTGAAGTTCAATTA
ATGTCTGAAAAGGAAAGATTAGAAAAAGAACTGAGGAATCAACAGAACAACCTTCACATT
GTAAGATATCAGCTATTTATTTTTCTCTTTCAATGTTTTAAGAAGCAAATGAAACACTTC
CCTACTCTATCATGCAGCTCAAGAAGAAGATTGAAAAATCATCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400045830
PEP Infomation

pacid=37424221 transcript=PGSC0003DMT400067879 locus=PGSC0003DMG401026400 ID=PGSC0003DMT400067879.v4.03 annot-version=v4.03
Sequence

MSAPLVLAPNSNTLCYHHSNSFINQKTLLFSKSFNSKFTSFSSQYNDNNNPIKNEEQYNL
EFENQDYGSSSSGIKGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKTQNPNDALSGK
VSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGDVSYEIEEKN
PYGEEDNVESLEGVEFGVLSREGEGRGSRKIGVKMPWESEVRIVYRRMKKEKVVMTAESN
LDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFDLPLCRNMDRA
REIVEMKTGGFVVWMKQNALVVYRGCSYTLQQKELQHDFLCSHQNSSFTENIKQTSIFSP
LNSSGSSEDEMISVGNSEEDSLAMNESLYVREANRLLDDLGPRYVDWWWPKPLPVNADLL
PEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTHFVLGRNRKLQGLAAAVVKLW
EKCHIAKIALKWGIPNTSNELMANELKYLTGGVLLLRNKFFIILYRGKDFLPSQVANLVA
EREVELTRCQLEEEVARFKAIETLPITMEVSMSSSSVGTLSEFQTIAEPGKEKSEVEVQL
MSEKERLEKELRNQQNNLHIVRYQLFIFLFQCFKKQMKHFPTLSCSSRRRLKNHL*

Transcript Sequence

Transcript ID

PGSC0003DMT400067879
Transcript Infomation

pacid=37424221 locus=PGSC0003DMG401026400 ID=PGSC0003DMT400067879.v4.03 annot-version=v4.03
Sequence

ATGTCTGCTCCTTTGGTTCTCGCTCCCAATTCGAATACCCTCTGTTATCACCATTCCAAT
TCTTTTATCAACCAAAAAACTCTTCTCTTTTCCAAATCTTTCAATTCTAAATTTACCAGC
TTTTCCTCTCAATACAATGATAATAATAATCCCATCAAGAACGAGGAGCAATACAATCTT
GAATTTGAAAATCAAGATTATGGGTCATCAAGTTCAGGAATTAAAGGCCCTACTGCTCCA
TGGATGAGGGGTCCTCTTCTTCTTGAACCTAATCAATTTTTGGACTTATCCAAATCCAGA
AAGAAGAAAGATGCCAATTTCGCTAAAACCCAAAATCCTAATGATGCACTTTCTGGTAAA
GTTAGTGGAGGAAGAGGTAAAAAAGCAATGAAGATGATTTATCAAGGAATTGATAAACTC
CAAGAAACGCAAATTGGGGAAGGTACACAGGTGGAAACTGATGCAAAGGTTGAATTTCAG
TTCCCACCAGGATCTTTATCTGAATGGGGAGATGTGAGTTATGAAATTGAGGAGAAAAAC
CCATATGGGGAGGAGGACAATGTGGAAAGCCTTGAGGGAGTGGAATTTGGTGTTTTATCA
AGAGAGGGGGAAGGAAGAGGGAGTAGAAAAATTGGGGTGAAAATGCCTTGGGAGAGTGAG
GTGAGAATTGTGTATAGGAGAATGAAGAAGGAGAAAGTTGTCATGACTGCAGAGTCGAAT
CTTGATGCAATGTTGCTTGAGAGATTGAGGGGTGAGGCTGCAAGGATTCAGAAGTGGGTG
AAGGTTAAGAAAGCCGGAGTTACCCGAACTGTTGTTGATCAAATCCACTTTATTTGGAAG
AATAATGAACTTGCAATGCTCAAATTTGACCTGCCTTTATGCCGTAATATGGACAGAGCT
CGAGAAATTGTCGAGATGAAGACTGGAGGCTTTGTTGTTTGGATGAAGCAAAATGCTCTG
GTTGTTTATAGAGGATGTAGCTATACTTTACAACAGAAGGAGCTACAGCATGATTTTCTA
TGTAGTCACCAGAACTCTTCATTTACTGAAAATATTAAACAGACAAGTATTTTCTCACCA
TTGAACTCAAGTGGGAGCAGTGAAGATGAAATGATAAGTGTTGGAAACTCAGAAGAGGAT
AGCCTAGCAATGAATGAGTCACTTTATGTGAGGGAAGCTAATAGATTGTTGGATGACTTA
GGACCTCGTTATGTTGATTGGTGGTGGCCAAAGCCTTTGCCTGTGAATGCGGATTTACTT
CCTGAAGTAGTTCCTGGATTTAAGCCACCATTTAGACTTTGCCCACCACGTTCAAGATCA
AAGCTGACAGATGATGAACTTACACAATTAAGGAAACTTGCTCGTTCTTTGCCAACTCAT
TTTGTTCTTGGGAGAAACAGAAAACTGCAAGGCTTGGCTGCAGCAGTCGTAAAGTTGTGG
GAGAAATGTCATATAGCAAAGATAGCTTTGAAGTGGGGAATTCCAAATACTAGCAATGAA
CTAATGGCAAATGAGTTAAAGTATCTTACAGGAGGAGTCCTTCTATTGCGGAATAAGTTC
TTTATAATCCTATACAGAGGCAAGGATTTTCTTCCTTCTCAAGTTGCAAACCTTGTAGCT
GAAAGGGAGGTGGAGCTCACAAGATGTCAGCTTGAGGAAGAAGTTGCACGATTCAAAGCA
ATTGAAACTCTTCCAATCACTATGGAAGTATCAATGAGCAGTAGTAGTGTTGGGACTTTA
TCAGAATTCCAGACAATTGCAGAACCTGGAAAGGAGAAATCTGAGGTTGAAGTTCAATTA
ATGTCTGAAAAGGAAAGATTAGAAAAAGAACTGAGGAATCAACAGAACAACCTTCACATT
GTAAGATATCAGCTATTTATTTTTCTCTTTCAATGTTTTAAGAAGCAAATGAAACACTTC
CCTACTCTATCATGCAGCTCAAGAAGAAGATTGAAAAATCATCTATAG