Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067850
CDS Infomation

pacid=37426120 polypeptide=PGSC0003DMP400045809 locus=PGSC0003DMG400026388 ID=PGSC0003DMT400067850.v4.03 annot-version=v4.03
Sequence

ATGCTCTCAGATCTCCACTCAACTGTCATTCTGTTTATCATTCTATGCTTTCTCCATATG
CCCATATCCCTCGGTCAAGATGACGAGCGATACAGGAGTTGTGGTGAGCCGTTTCAGTGC
GGCAGCATGAATATAATTTACCCTTTTTGGGGAGGGAGAAAACCAGAGTATTGTGGTCAT
CCTAGTTTTGAGATCAAGTGCGAAAGTAGCATACCCAAAATTGCAATTGAATCAACAAGA
TACGAAGTGATAGATATCAACACCCCTAATCGAATTGTAACCCTGGCTCGGGATGATTTA
CTGAGTAGTATTTGTTTGGATAATCCCGAGAATGCCTCCTTTGATTTAAACACTTTCAGC
TATGTTTCGAGTGACCTGAATATTACTCTGTATTTCGGCTGCACCGTCCGCCCTGGTTTG
CAGTTACCACCTTCGTCTCCAAATAGGTTCAATTGCAATAGCAGCATATTTGGTATATAC
ACTCTGATCAACGTTCCCTTCAACCTTAGTCTGGTAACATGCCAGGAAGAAATAATAGCT
AGGGTCAATCAAACGAGTGCTGTGGCATTAGCCAGTCCTACAGCTTCCGTGGAAGTTCTG
AGAAGAGCCATTGCTGGCGGTTTTTCAGTTAATTGGACGGCAGGTATTGATTCTAAGTGC
CAACAATGCCGCACGTCAGGTGGAAGATGTGGATCCAATCCAGATTCTGGAGACTTTGCA
TGCCATTGTCTAAATGGTACTCATTCAAACTACTGCAACGATGGACCAAACCACTTACCC
GTTGCCGCAGTTTGTATCGCAGGGCTGGCCATAATATCAGTTCCAATCATCTATTGCCTC
AGAAGTCGAGGGTCATCCTGTAAGTCACTGATTTGCTGGAAGATTGAATCACAAGATCAC
AAAATTGAAGAATTTATGAGAAATTACGGATCTCATGCTCCAAAGATGTACAGCTATTCA
GATCTAAAGAAAATAACAAGCTCATTCAGCCATAAAATAGGACAGGGAGGATTTGGTCAG
GTATACAAAGGAAATCTACCTGATGGTCACGCAGTAGCTGTAAAGGTCCTGACAGAAACT
AATGGTGACGGAGAAGAATATATAAATGAGGTAGCCAGTATAAGTAGAACTTCCCATGTT
AACATAGTAGGGCTTTTGGGATTTTGTTACCAAGGAAATAGGAGAGCCTTAATCTATGAG
TATGTGTCCAATGGTTCACTGGACAAATTTCTTAACAGTGGACCATCTAGCACAACTTGT
ACCTTGGAATGGACGACATTGTACAGTATCGCAGTTGGGACTGCTCGAGGGTTGGAATAT
TTGCACCGAGGTTGTAACACAAGAATAGTGCACTTTGACATAAAACCTCACAACATTCTC
TTGGACGAGGATTTCTGCCCCAAAATATCTGACTTTGGCCTCTCTAGATTGTGCGAGAGA
AAGGAGAGCATTCTATCAATGTTAGGTGCCAGGGGAACTGCTGGATACATTGCTCCAGAA
GTGTTCTCTAGAGCGTTTGGACACGTCTCTCACAAATCAGATGTCTACAGCTACGGCATG
CTTGTTCTTGAGATGGTTGGAGTGAGAAACAATGTTAACATGAACCAAACTAGTGAAGTA
TACTTTCCAAATTGGATCTATGAACATCTCGAGCTGGGGAAGGACCTAAGTCTACAAGGT
ATCATGAACGAAGAAGATGAAGAATTAGCAAGGAAGATGATTTTAGTGGGCTTGTGGTGC
ATTCAGACCAAGCCGTCAGATCGACCAGCAATAGAAAAGGCAGTTGAAATGCTGGAGGGA
AGCCTTCACTCCCTACAAGTTCCACCAAAACCTGTCTTGTTTTCTCCAACAAGATCCATC
CTAGAGTCATTTACATCAACATCCACATCGACCTCGGAAAGGAGGTTCGTTTCTGGAGCC
AATATCGCTTCCGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400045809
PEP Infomation

pacid=37426120 transcript=PGSC0003DMT400067850 locus=PGSC0003DMG400026388 ID=PGSC0003DMT400067850.v4.03 annot-version=v4.03
Sequence

MLSDLHSTVILFIILCFLHMPISLGQDDERYRSCGEPFQCGSMNIIYPFWGGRKPEYCGH
PSFEIKCESSIPKIAIESTRYEVIDINTPNRIVTLARDDLLSSICLDNPENASFDLNTFS
YVSSDLNITLYFGCTVRPGLQLPPSSPNRFNCNSSIFGIYTLINVPFNLSLVTCQEEIIA
RVNQTSAVALASPTASVEVLRRAIAGGFSVNWTAGIDSKCQQCRTSGGRCGSNPDSGDFA
CHCLNGTHSNYCNDGPNHLPVAAVCIAGLAIISVPIIYCLRSRGSSCKSLICWKIESQDH
KIEEFMRNYGSHAPKMYSYSDLKKITSSFSHKIGQGGFGQVYKGNLPDGHAVAVKVLTET
NGDGEEYINEVASISRTSHVNIVGLLGFCYQGNRRALIYEYVSNGSLDKFLNSGPSSTTC
TLEWTTLYSIAVGTARGLEYLHRGCNTRIVHFDIKPHNILLDEDFCPKISDFGLSRLCER
KESILSMLGARGTAGYIAPEVFSRAFGHVSHKSDVYSYGMLVLEMVGVRNNVNMNQTSEV
YFPNWIYEHLELGKDLSLQGIMNEEDEELARKMILVGLWCIQTKPSDRPAIEKAVEMLEG
SLHSLQVPPKPVLFSPTRSILESFTSTSTSTSERRFVSGANIASE*

Transcript Sequence

Transcript ID

PGSC0003DMT400067850
Transcript Infomation

pacid=37426120 locus=PGSC0003DMG400026388 ID=PGSC0003DMT400067850.v4.03 annot-version=v4.03
Sequence

ATGCTCTCAGATCTCCACTCAACTGTCATTCTGTTTATCATTCTATGCTTTCTCCATATG
CCCATATCCCTCGGTCAAGATGACGAGCGATACAGGAGTTGTGGTGAGCCGTTTCAGTGC
GGCAGCATGAATATAATTTACCCTTTTTGGGGAGGGAGAAAACCAGAGTATTGTGGTCAT
CCTAGTTTTGAGATCAAGTGCGAAAGTAGCATACCCAAAATTGCAATTGAATCAACAAGA
TACGAAGTGATAGATATCAACACCCCTAATCGAATTGTAACCCTGGCTCGGGATGATTTA
CTGAGTAGTATTTGTTTGGATAATCCCGAGAATGCCTCCTTTGATTTAAACACTTTCAGC
TATGTTTCGAGTGACCTGAATATTACTCTGTATTTCGGCTGCACCGTCCGCCCTGGTTTG
CAGTTACCACCTTCGTCTCCAAATAGGTTCAATTGCAATAGCAGCATATTTGGTATATAC
ACTCTGATCAACGTTCCCTTCAACCTTAGTCTGGTAACATGCCAGGAAGAAATAATAGCT
AGGGTCAATCAAACGAGTGCTGTGGCATTAGCCAGTCCTACAGCTTCCGTGGAAGTTCTG
AGAAGAGCCATTGCTGGCGGTTTTTCAGTTAATTGGACGGCAGGTATTGATTCTAAGTGC
CAACAATGCCGCACGTCAGGTGGAAGATGTGGATCCAATCCAGATTCTGGAGACTTTGCA
TGCCATTGTCTAAATGGTACTCATTCAAACTACTGCAACGATGGACCAAACCACTTACCC
GTTGCCGCAGTTTGTATCGCAGGGCTGGCCATAATATCAGTTCCAATCATCTATTGCCTC
AGAAGTCGAGGGTCATCCTGTAAGTCACTGATTTGCTGGAAGATTGAATCACAAGATCAC
AAAATTGAAGAATTTATGAGAAATTACGGATCTCATGCTCCAAAGATGTACAGCTATTCA
GATCTAAAGAAAATAACAAGCTCATTCAGCCATAAAATAGGACAGGGAGGATTTGGTCAG
GTATACAAAGGAAATCTACCTGATGGTCACGCAGTAGCTGTAAAGGTCCTGACAGAAACT
AATGGTGACGGAGAAGAATATATAAATGAGGTAGCCAGTATAAGTAGAACTTCCCATGTT
AACATAGTAGGGCTTTTGGGATTTTGTTACCAAGGAAATAGGAGAGCCTTAATCTATGAG
TATGTGTCCAATGGTTCACTGGACAAATTTCTTAACAGTGGACCATCTAGCACAACTTGT
ACCTTGGAATGGACGACATTGTACAGTATCGCAGTTGGGACTGCTCGAGGGTTGGAATAT
TTGCACCGAGGTTGTAACACAAGAATAGTGCACTTTGACATAAAACCTCACAACATTCTC
TTGGACGAGGATTTCTGCCCCAAAATATCTGACTTTGGCCTCTCTAGATTGTGCGAGAGA
AAGGAGAGCATTCTATCAATGTTAGGTGCCAGGGGAACTGCTGGATACATTGCTCCAGAA
GTGTTCTCTAGAGCGTTTGGACACGTCTCTCACAAATCAGATGTCTACAGCTACGGCATG
CTTGTTCTTGAGATGGTTGGAGTGAGAAACAATGTTAACATGAACCAAACTAGTGAAGTA
TACTTTCCAAATTGGATCTATGAACATCTCGAGCTGGGGAAGGACCTAAGTCTACAAGGT
ATCATGAACGAAGAAGATGAAGAATTAGCAAGGAAGATGATTTTAGTGGGCTTGTGGTGC
ATTCAGACCAAGCCGTCAGATCGACCAGCAATAGAAAAGGCAGTTGAAATGCTGGAGGGA
AGCCTTCACTCCCTACAAGTTCCACCAAAACCTGTCTTGTTTTCTCCAACAAGATCCATC
CTAGAGTCATTTACATCAACATCCACATCGACCTCGGAAAGGAGGTTCGTTTCTGGAGCC
AATATCGCTTCCGAGTAA