Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067835
CDS Infomation

pacid=37426937 polypeptide=PGSC0003DMP400045801 locus=PGSC0003DMG400026384 ID=PGSC0003DMT400067835.v4.03 annot-version=v4.03
Sequence

ATGACTCTCTCCTACCCTTCCACCACTACCAATGGCCGCCGCGGCGCCACCACCACAACT
ACTCTCTTCTTCGCCACCTTTATTCTCACAACATCCTTCTCCTTCTCCTTCTCTGATGAC
AACGTCTTATTCCCCAATTGTCATCTCACTTTCTCCTGTGGTTCCATCCGTAACATCACC
TACCCATTCACCGGCGGCGATCGCCCTAACTACTGTGGCCTCCCGGATTTCAAACTCCGA
TGTGTTGACGACAAACACACCGAGTTTACTCACCAATCACTTACTTACCGTGTTCTTTCT
ATTAATCAGTCATCAACGACCATGACTGTATCGAGAATCGACCTCTGGAAAAATTCCTGC
CCTTCGCAATTCATCAACACTACTTTTAATTCTTCTCTTTTCAACATTGACCGTAACGAA
GACGAAGAACTTTCGTTGAGCTACGGCTGCGATGTCTCTGCATTGGTTATCACGCCTCAG
AATTTGTTCAACTGTAGTGTAGATGGTTTGAATTTCACCGGCGCATTTTACTTACTAGGT
CCAATTCCAAGTGACCCTTTTCTGAATGTCATAACTTGTACAACTATGGTCACTGTTCCG
ATGTTTAGAACAGTGGGTAAAATGCTATATAGCAATGAGATTACTCTTGGGGAGGCATTG
ATGCAGGGGTTTAGTGTGAAATATGATACCCCTTATGATAGGCGCTGTTCTGAGTGCAAG
AGTCTGGGTGTGAATTGCGGATTTATTGTGGGGTTGTCTCAGCTAATTTGTATTTGTGGA
GAAATGCCTTGTACATTTCTTCGAGAACATTCTCATGAAAGTTCCTCACAAGATAACCGA
AAGAAAAATCAGATGCCACTTGCAGTAGGCATTAGTGTAGGAGGTGCTGTACTTGCCAGC
ATTGGTGTTGGGTGGCTAGTCTTCTTCTGCAGACAAAAGAGAAAGCGGATTGCATCACAG
GCTTCACTTGCCCAAACCGAAAGGAAGGATCTTCCAATTTTAAGTTCAAGCAACGGCCTG
AGTTCCTCTTCTACTCCTTCTTCAACCACTTTCACCAGAAGCATTCCCTCTTATCCCTCT
TCCAAATCTGAAGCTGATTACGGGAGGGGAAGCTCCTACTTTGGGGCTCATGTCTTCAGT
TTTGCTGAACTTGAAGAAGCCACGAATAATTTTGATCCATCTAAAGAACTTGGGGATGGT
GGTTTTGGTGTCGTGTACTATGGCAAACTCCATGATGGTCGCGTGGTTGCAGTCAAGCGC
TTGTATGAGAACAATTTCAAGCGTGTGGAGCAGTTCATGAATGAAGTAGAGATTTTAACT
CAGCTCCGCCACAAGAACCTAGTGATGTTGTATGGGTGTACATCTAAACGAAGCCGAGAG
TTACTGCTTGTTTATGAGTATATACCAAACGGGACTGTGGCAGATCATCTGCATGGTAAA
CGGGCCAAATCTGGCTTACTCTCTTGGCCTATCCGAATGAACATAGCCATTGAGACTGCT
GAAGCTCTGGCTTATCTCCACTCCTCAGTTATAATACACCGTGACGTCAAAACCAACAAC
ATTCTGTTAGACAATGATTTCCATGTGAAAGTTGCTGATTTTGGGCTATCAAGACTGTTC
CCAACTAATGTCACACATGTCTCTACTGCTCCACAGGGTACACCAGGCTACGTTGATCCT
GAATACTACCAATGTTACCAGCTCACTGAAAAGAGTGATGTCTATAGTTTTGGGGTGGTC
TTGGTAGAGCTGATCTCATCATTAGAAGCTGTGGATACCAACAGGCACCGCCATGATATT
AATTTGTCTAATATGGCTGTCAACAAGATCCAAGGCCATTCAATACATGAGTTAGTTGAT
CCAAGTCTTGGATTCTCAACAAACAGCTCCGTGAGGAGGATGACTACATTAGTCGCTGAG
TTAGCTTTCCGATGTCTGCAACAAGAGAGAGATCTGAGACCTTCAATGCAAGAAGTGCTG
GAGACATTGAGAGGCATCCAGAATGGAGAGTCGAAAGCACACAATGCTGAGGTACTGGAT
ATTGTGGTAGATGATGTTGGGCTCCTAAAGGAGGGCCCCTTTTCTTCTCCAGATTCAGTT
GCCGCTGACAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400045801
PEP Infomation

pacid=37426937 transcript=PGSC0003DMT400067835 locus=PGSC0003DMG400026384 ID=PGSC0003DMT400067835.v4.03 annot-version=v4.03
Sequence

MTLSYPSTTTNGRRGATTTTTLFFATFILTTSFSFSFSDDNVLFPNCHLTFSCGSIRNIT
YPFTGGDRPNYCGLPDFKLRCVDDKHTEFTHQSLTYRVLSINQSSTTMTVSRIDLWKNSC
PSQFINTTFNSSLFNIDRNEDEELSLSYGCDVSALVITPQNLFNCSVDGLNFTGAFYLLG
PIPSDPFLNVITCTTMVTVPMFRTVGKMLYSNEITLGEALMQGFSVKYDTPYDRRCSECK
SLGVNCGFIVGLSQLICICGEMPCTFLREHSHESSSQDNRKKNQMPLAVGISVGGAVLAS
IGVGWLVFFCRQKRKRIASQASLAQTERKDLPILSSSNGLSSSSTPSSTTFTRSIPSYPS
SKSEADYGRGSSYFGAHVFSFAELEEATNNFDPSKELGDGGFGVVYYGKLHDGRVVAVKR
LYENNFKRVEQFMNEVEILTQLRHKNLVMLYGCTSKRSRELLLVYEYIPNGTVADHLHGK
RAKSGLLSWPIRMNIAIETAEALAYLHSSVIIHRDVKTNNILLDNDFHVKVADFGLSRLF
PTNVTHVSTAPQGTPGYVDPEYYQCYQLTEKSDVYSFGVVLVELISSLEAVDTNRHRHDI
NLSNMAVNKIQGHSIHELVDPSLGFSTNSSVRRMTTLVAELAFRCLQQERDLRPSMQEVL
ETLRGIQNGESKAHNAEVLDIVVDDVGLLKEGPFSSPDSVAADK*

Transcript Sequence

Transcript ID

PGSC0003DMT400067835
Transcript Infomation

pacid=37426937 locus=PGSC0003DMG400026384 ID=PGSC0003DMT400067835.v4.03 annot-version=v4.03
Sequence

ATGACTCTCTCCTACCCTTCCACCACTACCAATGGCCGCCGCGGCGCCACCACCACAACT
ACTCTCTTCTTCGCCACCTTTATTCTCACAACATCCTTCTCCTTCTCCTTCTCTGATGAC
AACGTCTTATTCCCCAATTGTCATCTCACTTTCTCCTGTGGTTCCATCCGTAACATCACC
TACCCATTCACCGGCGGCGATCGCCCTAACTACTGTGGCCTCCCGGATTTCAAACTCCGA
TGTGTTGACGACAAACACACCGAGTTTACTCACCAATCACTTACTTACCGTGTTCTTTCT
ATTAATCAGTCATCAACGACCATGACTGTATCGAGAATCGACCTCTGGAAAAATTCCTGC
CCTTCGCAATTCATCAACACTACTTTTAATTCTTCTCTTTTCAACATTGACCGTAACGAA
GACGAAGAACTTTCGTTGAGCTACGGCTGCGATGTCTCTGCATTGGTTATCACGCCTCAG
AATTTGTTCAACTGTAGTGTAGATGGTTTGAATTTCACCGGCGCATTTTACTTACTAGGT
CCAATTCCAAGTGACCCTTTTCTGAATGTCATAACTTGTACAACTATGGTCACTGTTCCG
ATGTTTAGAACAGTGGGTAAAATGCTATATAGCAATGAGATTACTCTTGGGGAGGCATTG
ATGCAGGGGTTTAGTGTGAAATATGATACCCCTTATGATAGGCGCTGTTCTGAGTGCAAG
AGTCTGGGTGTGAATTGCGGATTTATTGTGGGGTTGTCTCAGCTAATTTGTATTTGTGGA
GAAATGCCTTGTACATTTCTTCGAGAACATTCTCATGAAAGTTCCTCACAAGATAACCGA
AAGAAAAATCAGATGCCACTTGCAGTAGGCATTAGTGTAGGAGGTGCTGTACTTGCCAGC
ATTGGTGTTGGGTGGCTAGTCTTCTTCTGCAGACAAAAGAGAAAGCGGATTGCATCACAG
GCTTCACTTGCCCAAACCGAAAGGAAGGATCTTCCAATTTTAAGTTCAAGCAACGGCCTG
AGTTCCTCTTCTACTCCTTCTTCAACCACTTTCACCAGAAGCATTCCCTCTTATCCCTCT
TCCAAATCTGAAGCTGATTACGGGAGGGGAAGCTCCTACTTTGGGGCTCATGTCTTCAGT
TTTGCTGAACTTGAAGAAGCCACGAATAATTTTGATCCATCTAAAGAACTTGGGGATGGT
GGTTTTGGTGTCGTGTACTATGGCAAACTCCATGATGGTCGCGTGGTTGCAGTCAAGCGC
TTGTATGAGAACAATTTCAAGCGTGTGGAGCAGTTCATGAATGAAGTAGAGATTTTAACT
CAGCTCCGCCACAAGAACCTAGTGATGTTGTATGGGTGTACATCTAAACGAAGCCGAGAG
TTACTGCTTGTTTATGAGTATATACCAAACGGGACTGTGGCAGATCATCTGCATGGTAAA
CGGGCCAAATCTGGCTTACTCTCTTGGCCTATCCGAATGAACATAGCCATTGAGACTGCT
GAAGCTCTGGCTTATCTCCACTCCTCAGTTATAATACACCGTGACGTCAAAACCAACAAC
ATTCTGTTAGACAATGATTTCCATGTGAAAGTTGCTGATTTTGGGCTATCAAGACTGTTC
CCAACTAATGTCACACATGTCTCTACTGCTCCACAGGGTACACCAGGCTACGTTGATCCT
GAATACTACCAATGTTACCAGCTCACTGAAAAGAGTGATGTCTATAGTTTTGGGGTGGTC
TTGGTAGAGCTGATCTCATCATTAGAAGCTGTGGATACCAACAGGCACCGCCATGATATT
AATTTGTCTAATATGGCTGTCAACAAGATCCAAGGCCATTCAATACATGAGTTAGTTGAT
CCAAGTCTTGGATTCTCAACAAACAGCTCCGTGAGGAGGATGACTACATTAGTCGCTGAG
TTAGCTTTCCGATGTCTGCAACAAGAGAGAGATCTGAGACCTTCAATGCAAGAAGTGCTG
GAGACATTGAGAGGCATCCAGAATGGAGAGTCGAAAGCACACAATGCTGAGGTACTGGAT
ATTGTGGTAGATGATGTTGGGCTCCTAAAGGAGGGCCCCTTTTCTTCTCCAGATTCAGTT
GCCGCTGACAAATGA