Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067817
CDS Infomation

pacid=37427855 polypeptide=PGSC0003DMP400045786 locus=PGSC0003DMG400026379 ID=PGSC0003DMT400067817.v4.03 annot-version=v4.03
Sequence

ATGGACCCACCATCCCCGGCTCCGCCGTCTACCGCCACCGATTCACTCTTGGACTTACCA
CCTCTTCCCACTCCGACCACCAAGGTCCGCCTTTTATGCAGTTATGGTGGACATATAGTT
CAACGTCCTCACGATAAAACTCTTTGTTATGCCGGCGGTGACAACCGTGTCGTCGCCGTC
GACCGTCGCACCACCATTTCTTCTCTCTCCGCCCTTTCTGCCCATCTTTCTCGTACCCTT
TACGGTAATCGTCCATTTTATCTCAAATACCAGCTTCCTGACGAGGAACTTGATTCTCTC
ATCACCGTCACCACCGATGAGGACTTACAGAACATGCTTGAAGAACACGATAGGACCATC
ACTGCGTCTGTTACATCTTCCCGTATCAGATTATTCCTCTTTCCCGTCAAACCCGAATCG
TTGGGTTCGGCCCTACTTGATTCTAAAGCTGATTCTTGGTTTTCTGATGCTTTGAATAAT
ACCCGGATCGCCAGAAGGGGTCAATCAACTGATTCGGGCTTTGGTCATGAGTTAATCGGT
TTTGAAAATTTGGGTGGGTCCAATTCGGTTGTTTCTTCAGAGGGACAGGGTGATAATTTG
AGTGCAATCGGAGGGAGTGCTGGAGATGCCAAGCAAACATTGGATTTTGGTGGTGGTTCA
GTGCCTGAGTCTATGGTTTTGGAGACTAGCTCTTCATTTGGGTCGACCAGTTCTTCCATT
TCTATGTCCAATATACCTGCTATTGGAGTTCAAGCCGAGGATGGTGGTGTCAATTTGCAG
GACAAAAGAGTCAGAGTGCCCTCATCATCAGCTTCAATAGAGAGCGATAGTATCGTTGGA
AGTACGGATTTTCAACCTAAAGTTGGAATTCACCAAGAGCCACTTATTCAAGTTATGTCC
AGTATGGCTTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAATCCCTCTCTCATT
CAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAGACATTGGATGGGAAG
CACCCCCAACCTGGAATGCAGTATGTTCATGGTGGTGCCTGTTATGTACCTCATTATCCT
AGCGGTCCTTTGCCAGTATCATCCTGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCA
CAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTATGCAGCAA
ATGCAATCTCACAGTATGTCAGTGTTGCCCAACATTAATCATGCAGCAGTAATGGCGTCC
AATCGGCCACCCTTGCATCCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAG
GTCATGGCGGCTCAATCAGTGCCTGAGTCGGGTTCAAAAGTGTACACGACTGTCCCAACA
GCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAA
CCACAGCTTATTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAAT
GAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCT
TTCATTTCCCAGTGCCAAAACATTACAAAGGGGGCAGCAGTATTACTGTCAGAGTCTTCC
ATGCAGATGCACAGTAACAATGTAATGAACCAGGCACCATCACATCCTCAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045786
PEP Infomation

pacid=37427855 transcript=PGSC0003DMT400067817 locus=PGSC0003DMG400026379 ID=PGSC0003DMT400067817.v4.03 annot-version=v4.03
Sequence

MDPPSPAPPSTATDSLLDLPPLPTPTTKVRLLCSYGGHIVQRPHDKTLCYAGGDNRVVAV
DRRTTISSLSALSAHLSRTLYGNRPFYLKYQLPDEELDSLITVTTDEDLQNMLEEHDRTI
TASVTSSRIRLFLFPVKPESLGSALLDSKADSWFSDALNNTRIARRGQSTDSGFGHELIG
FENLGGSNSVVSSEGQGDNLSAIGGSAGDAKQTLDFGGGSVPESMVLETSSSFGSTSSSI
SMSNIPAIGVQAEDGGVNLQDKRVRVPSSSASIESDSIVGSTDFQPKVGIHQEPLIQVMS
SMASHSLFEAEGSNANPSLIQTPKMVQVSGYPLPQTLDGKHPQPGMQYVHGGACYVPHYP
SGPLPVSSCYPFYQVPMQQPQQTPYPLNQQYPIYLVPMQQMQSHSMSVLPNINHAAVMAS
NRPPLHPQSVINPPSVAYKEVMAAQSVPESGSKVYTTVPTASLPISAPSQTQQQYTVLPE
PQLISQPVSTASVPAANDANEFDDDLAYNQIYKSQPPPPSFISQCQNITKGAAVLLSESS
MQMHSNNVMNQAPSHPQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400067817
Transcript Infomation

pacid=37427855 locus=PGSC0003DMG400026379 ID=PGSC0003DMT400067817.v4.03 annot-version=v4.03
Sequence

ATGGACCCACCATCCCCGGCTCCGCCGTCTACCGCCACCGATTCACTCTTGGACTTACCA
CCTCTTCCCACTCCGACCACCAAGGTCCGCCTTTTATGCAGTTATGGTGGACATATAGTT
CAACGTCCTCACGATAAAACTCTTTGTTATGCCGGCGGTGACAACCGTGTCGTCGCCGTC
GACCGTCGCACCACCATTTCTTCTCTCTCCGCCCTTTCTGCCCATCTTTCTCGTACCCTT
TACGGTAATCGTCCATTTTATCTCAAATACCAGCTTCCTGACGAGGAACTTGATTCTCTC
ATCACCGTCACCACCGATGAGGACTTACAGAACATGCTTGAAGAACACGATAGGACCATC
ACTGCGTCTGTTACATCTTCCCGTATCAGATTATTCCTCTTTCCCGTCAAACCCGAATCG
TTGGGTTCGGCCCTACTTGATTCTAAAGCTGATTCTTGGTTTTCTGATGCTTTGAATAAT
ACCCGGATCGCCAGAAGGGGTCAATCAACTGATTCGGGCTTTGGTCATGAGTTAATCGGT
TTTGAAAATTTGGGTGGGTCCAATTCGGTTGTTTCTTCAGAGGGACAGGGTGATAATTTG
AGTGCAATCGGAGGGAGTGCTGGAGATGCCAAGCAAACATTGGATTTTGGTGGTGGTTCA
GTGCCTGAGTCTATGGTTTTGGAGACTAGCTCTTCATTTGGGTCGACCAGTTCTTCCATT
TCTATGTCCAATATACCTGCTATTGGAGTTCAAGCCGAGGATGGTGGTGTCAATTTGCAG
GACAAAAGAGTCAGAGTGCCCTCATCATCAGCTTCAATAGAGAGCGATAGTATCGTTGGA
AGTACGGATTTTCAACCTAAAGTTGGAATTCACCAAGAGCCACTTATTCAAGTTATGTCC
AGTATGGCTTCCCACAGTCTCTTCGAAGCAGAAGGCTCCAATGCCAATCCCTCTCTCATT
CAGACGCCAAAAATGGTTCAGGTTTCTGGGTATCCACTACCTCAGACATTGGATGGGAAG
CACCCCCAACCTGGAATGCAGTATGTTCATGGTGGTGCCTGTTATGTACCTCATTATCCT
AGCGGTCCTTTGCCAGTATCATCCTGTTATCCATTTTATCAGGTTCCCATGCAGCAGCCA
CAACAAACTCCTTATCCTCTGAATCAACAATACCCAATATACTTGGTTCCTATGCAGCAA
ATGCAATCTCACAGTATGTCAGTGTTGCCCAACATTAATCATGCAGCAGTAATGGCGTCC
AATCGGCCACCCTTGCATCCACAAAGTGTCATAAACCCTCCATCAGTAGCTTATAAGGAG
GTCATGGCGGCTCAATCAGTGCCTGAGTCGGGTTCAAAAGTGTACACGACTGTCCCAACA
GCATCACTACCCATTAGTGCGCCTTCTCAGACTCAGCAACAATATACTGTCCTTCCTGAA
CCACAGCTTATTTCCCAACCTGTCTCAACTGCATCAGTTCCTGCTGCAAATGATGCAAAT
GAGTTTGACGATGATCTTGCATACAATCAGATATATAAATCTCAGCCTCCTCCACCTTCT
TTCATTTCCCAGTGCCAAAACATTACAAAGGGGGCAGCAGTATTACTGTCAGAGTCTTCC
ATGCAGATGCACAGTAACAATGTAATGAACCAGGCACCATCACATCCTCAGTGA