Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067740
CDS Infomation

pacid=37465944 polypeptide=PGSC0003DMP400045735 locus=PGSC0003DMG400026347 ID=PGSC0003DMT400067740.v4.03 annot-version=v4.03
Sequence

ATGGCTGTGTTGAGCTCAAAGCAAGTGTTGAAAGACAACAACACTACTGACCCCAGCTCA
ATTACATCACTTACCCTCACTCACAAAGCTCTTTCTGATGTATCCTGTTTGAGCGAATTT
GAAAATTTGCAGAAGCTTGATCTTGGGTTTAACAATTTAACTTCCTTAGAGGGGTTGAAG
TTATGTGCGAATTTGAAGTGGCTCTCTGTGTTGCAAAACAAACTTCAGAGCTTGAAAGGG
ATTGAAGGACTTGTCAAACTGACTGTACTGAATGCTGGAAAAAACAAGCTCAAATCTATG
GACGAGGTCAGTGGTCTTGTGAACTTGCGAGCACTGATTTTGAATGACAATGACATTGTT
TCAATTTGCAAGCTTGATAAAATGAAAGAGTTGAATACATTGGTTCTATCTAGAAATCCA
ATATCTGGAATTGGCCAGAGTCTAGCCAAAATTAACTCAATCACAAAATTATCTCTCTCT
AATTGCCAACTACAAGGTGTTGACTCTTCACTTAAATCCTGCACCGAGTTAAAGGAGCTA
CGACTTGCTCATAATGATATTAAGACACTTCCTAGTGAGTTGGCTTTTAATATAAAACTA
CAAAACTTAGACATCGGAAACAATGTGATCATTAAGTGGTCAGATCTGAAGGTGCTGTCT
TCATTAGTTAACTTGAAAAACTTAAACCTGCAAGGGAACCCCATTGCTGAAAAGGAAGAT
TTGGCTAAAAAGATCAAAAAACAAGTGCCGCATTTGCAGATTCTCAATGCTAAACCTATT
GAAAAGGCCATGAAAAAGGAAGAGGGTGGCAGAGGCGATGATGAAAATGAAAGTGGTGAT
CTTGATATTGCCAGGGTTCGGGATAGCAAGGAAGAAAGGAAGCTTAAAAAGAAAAAGAGA
AGTGGACCACTGGAGGAAGGGCTAGATGATCACCATGAAGAGAGTACTTTCCTGGAGAAC
GACAAAGTGAAAAAGTCTAACAAGTTTTCGAAGAATGGCAAGAATGCTGCTGATGCAGCC
GAAACTGTACTCTCATATCCTGATGAACAGAAGGAATCAAAGCTCAAAAAGGAAAAGATT
AACGAATTTGATAAAGCTTCTGGCCGTAAGAGGAAGGAGTTGGTAGAAGCAGAAAAAAGA
ACCAATTCCATTGAACTTGACACAGGAGAGGAACGAAAGCACAAAAAACAGAAGAAGAGT
GAAGTATTGAAGGAGAAAGCTTCAAATGTCAAGGATAAGGAACCAGCTAAAATGTCTAGT
AAGAAGGCTAAACAAAATAAAGCAAGTGCCATTGATGATGGAGAAACTCCTTTCTCGGCT
CTTTTTATCTCTGACTTATCAGATCCATTGGCCAGTAGCCGGAAGGTTGGTAATCACCGC
ACACACCAACAAAATGTTGATGCAGCTGCAGGTTTGGCTACATTTCCGAAAAAGAAAAAG
CAGAAGAAGAATATTGTAACTGGCGCTGCTGCTGTTCAATTTTCATCAGTAAGCGATGAA
ATTGGATTGGGCGGTGCATCAACATGGGATGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400045735
PEP Infomation

pacid=37465944 transcript=PGSC0003DMT400067740 locus=PGSC0003DMG400026347 ID=PGSC0003DMT400067740.v4.03 annot-version=v4.03
Sequence

MAVLSSKQVLKDNNTTDPSSITSLTLTHKALSDVSCLSEFENLQKLDLGFNNLTSLEGLK
LCANLKWLSVLQNKLQSLKGIEGLVKLTVLNAGKNKLKSMDEVSGLVNLRALILNDNDIV
SICKLDKMKELNTLVLSRNPISGIGQSLAKINSITKLSLSNCQLQGVDSSLKSCTELKEL
RLAHNDIKTLPSELAFNIKLQNLDIGNNVIIKWSDLKVLSSLVNLKNLNLQGNPIAEKED
LAKKIKKQVPHLQILNAKPIEKAMKKEEGGRGDDENESGDLDIARVRDSKEERKLKKKKR
SGPLEEGLDDHHEESTFLENDKVKKSNKFSKNGKNAADAAETVLSYPDEQKESKLKKEKI
NEFDKASGRKRKELVEAEKRTNSIELDTGEERKHKKQKKSEVLKEKASNVKDKEPAKMSS
KKAKQNKASAIDDGETPFSALFISDLSDPLASSRKVGNHRTHQQNVDAAAGLATFPKKKK
QKKNIVTGAAAVQFSSVSDEIGLGGASTWDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400067740
Transcript Infomation

pacid=37465944 locus=PGSC0003DMG400026347 ID=PGSC0003DMT400067740.v4.03 annot-version=v4.03
Sequence

ATGGCTGTGTTGAGCTCAAAGCAAGTGTTGAAAGACAACAACACTACTGACCCCAGCTCA
ATTACATCACTTACCCTCACTCACAAAGCTCTTTCTGATGTATCCTGTTTGAGCGAATTT
GAAAATTTGCAGAAGCTTGATCTTGGGTTTAACAATTTAACTTCCTTAGAGGGGTTGAAG
TTATGTGCGAATTTGAAGTGGCTCTCTGTGTTGCAAAACAAACTTCAGAGCTTGAAAGGG
ATTGAAGGACTTGTCAAACTGACTGTACTGAATGCTGGAAAAAACAAGCTCAAATCTATG
GACGAGGTCAGTGGTCTTGTGAACTTGCGAGCACTGATTTTGAATGACAATGACATTGTT
TCAATTTGCAAGCTTGATAAAATGAAAGAGTTGAATACATTGGTTCTATCTAGAAATCCA
ATATCTGGAATTGGCCAGAGTCTAGCCAAAATTAACTCAATCACAAAATTATCTCTCTCT
AATTGCCAACTACAAGGTGTTGACTCTTCACTTAAATCCTGCACCGAGTTAAAGGAGCTA
CGACTTGCTCATAATGATATTAAGACACTTCCTAGTGAGTTGGCTTTTAATATAAAACTA
CAAAACTTAGACATCGGAAACAATGTGATCATTAAGTGGTCAGATCTGAAGGTGCTGTCT
TCATTAGTTAACTTGAAAAACTTAAACCTGCAAGGGAACCCCATTGCTGAAAAGGAAGAT
TTGGCTAAAAAGATCAAAAAACAAGTGCCGCATTTGCAGATTCTCAATGCTAAACCTATT
GAAAAGGCCATGAAAAAGGAAGAGGGTGGCAGAGGCGATGATGAAAATGAAAGTGGTGAT
CTTGATATTGCCAGGGTTCGGGATAGCAAGGAAGAAAGGAAGCTTAAAAAGAAAAAGAGA
AGTGGACCACTGGAGGAAGGGCTAGATGATCACCATGAAGAGAGTACTTTCCTGGAGAAC
GACAAAGTGAAAAAGTCTAACAAGTTTTCGAAGAATGGCAAGAATGCTGCTGATGCAGCC
GAAACTGTACTCTCATATCCTGATGAACAGAAGGAATCAAAGCTCAAAAAGGAAAAGATT
AACGAATTTGATAAAGCTTCTGGCCGTAAGAGGAAGGAGTTGGTAGAAGCAGAAAAAAGA
ACCAATTCCATTGAACTTGACACAGGAGAGGAACGAAAGCACAAAAAACAGAAGAAGAGT
GAAGTATTGAAGGAGAAAGCTTCAAATGTCAAGGATAAGGAACCAGCTAAAATGTCTAGT
AAGAAGGCTAAACAAAATAAAGCAAGTGCCATTGATGATGGAGAAACTCCTTTCTCGGCT
CTTTTTATCTCTGACTTATCAGATCCATTGGCCAGTAGCCGGAAGGTTGGTAATCACCGC
ACACACCAACAAAATGTTGATGCAGCTGCAGGTTTGGCTACATTTCCGAAAAAGAAAAAG
CAGAAGAAGAATATTGTAACTGGCGCTGCTGCTGTTCAATTTTCATCAGTAAGCGATGAA
ATTGGATTGGGCGGTGCATCAACATGGGATGACTAG