Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067726
CDS Infomation

pacid=37466191 polypeptide=PGSC0003DMP400045723 locus=PGSC0003DMG400026340 ID=PGSC0003DMT400067726.v4.03 annot-version=v4.03
Sequence

ATGAGAATGCTTTCACATCACTTCAGCTCCAAGGACCTCTTGGCTCTGGTAATGTGTTCT
TCCACTTGGCTATCAAAGGTTGAGCCACTTTCTGCCTGGTACAAGTTTAAATCCCATTAT
CACACACAACAGCCAGAGCAAGATAGAAAAAGAAGACAAGAAGATGAAGAACATAAACAA
AACATGAACCAGGGACCATCTATTGGCTCTCCAGCTCGAGTCCAGAAGCTTATTGCTTCC
CAATCAGATCCACTCCTTGCTAAAGAAATTTTTGATTTAGCCTCACGAGAACCCGATTTT
CAGCACTCCTATGCCACTTTCCACACTCTCATCCTCAAGCTTGGCCGTTCCCGGCAGTTC
TCCCTCATGCAGTCCGTCTTCTCTTCCCTAAAGTCACAGCATTATTCCATCTCCCCATCC
CTTTTTTCGCGCATCATCCAAATCTATGGTGATGCTGGCCTACCTGACAAAGCCCTTAAA
ACTTTCTATACTATCCTGGAATTCAATATGAAGCCCCTTCCGAAGCATCTCAACCTCATT
CTTGAAATCCTCGTAACGCATCGGAACTTTCTTCGCCCTGCTTTTGATCTCTTCAGATCT
GCACATACATACGGAGTTTTGGCCAACACCGAGTCCTACAACATTCTAATGCGGGCATTC
TGTTTGAATGATGATTTAAGTATTGCCTACTCGCTGTTTAATCAAATGTTTAAGAGAGAG
ATCAGTCCTAATGTAGAGTCATATAGGATTCTGATGCAGGGTTTGTGTCGAAAAAGTCAA
GTGAATACAGCTGTTGACTTGCTGGAGGATATGCTGAATAAAGGTTTTGTTCCCGATGCT
TTAAGTTATAGCACTCTATTGAATAGCTTGTGTCGGAAAAAGAAATTTAAGGAGGCTTAC
AAGCTTCTTTGCAGAATGAAAGTAAAGGGTTGCAATCCTGACATTGTCCATTACAATACA
GTAATTCTGGGGTTCTGTCGAGAAGGTCGTGCTGCTGATGCCTGTAAAATCCTCGAGGAC
ATGCCATCAAACGGGTGTCTTCCCAATTTGGTGTCTTATAGGACATTAGTTGGGGGTCTA
AGCAATCAGGGAATGTACGATGAGGCTAAGAATTACATGGTGGAAATGATGTCAAAAGGC
TTCTCTCCACATTTTTCTGTGGTTCACACGGTTGTGAAAGGTTTCTGTAACCTAGGTAAA
ATTGAGGAAGCTTGTGGAGTAGCGGGGAGTATTTTGAGTCATGGTGAACCCCTACATACA
GATACATGGGAAGAAATTGTATCCAGGATCTTGGAATGGGATGCTGCTGAAAAAATAGGG
AACACCTTGGTGGAACTTATTCAAGCCGAGATAAAACCTGAAATGAGAATAGTTGAGGCT
GGCGCTAGGTTGGGTGAATATTTGATGAACAGCATAAAAAGTAAATCAAGGAAGGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045723
PEP Infomation

pacid=37466191 transcript=PGSC0003DMT400067726 locus=PGSC0003DMG400026340 ID=PGSC0003DMT400067726.v4.03 annot-version=v4.03
Sequence

MRMLSHHFSSKDLLALVMCSSTWLSKVEPLSAWYKFKSHYHTQQPEQDRKRRQEDEEHKQ
NMNQGPSIGSPARVQKLIASQSDPLLAKEIFDLASREPDFQHSYATFHTLILKLGRSRQF
SLMQSVFSSLKSQHYSISPSLFSRIIQIYGDAGLPDKALKTFYTILEFNMKPLPKHLNLI
LEILVTHRNFLRPAFDLFRSAHTYGVLANTESYNILMRAFCLNDDLSIAYSLFNQMFKRE
ISPNVESYRILMQGLCRKSQVNTAVDLLEDMLNKGFVPDALSYSTLLNSLCRKKKFKEAY
KLLCRMKVKGCNPDIVHYNTVILGFCREGRAADACKILEDMPSNGCLPNLVSYRTLVGGL
SNQGMYDEAKNYMVEMMSKGFSPHFSVVHTVVKGFCNLGKIEEACGVAGSILSHGEPLHT
DTWEEIVSRILEWDAAEKIGNTLVELIQAEIKPEMRIVEAGARLGEYLMNSIKSKSRKG*

Transcript Sequence

Transcript ID

PGSC0003DMT400067726
Transcript Infomation

pacid=37466191 locus=PGSC0003DMG400026340 ID=PGSC0003DMT400067726.v4.03 annot-version=v4.03
Sequence

ATGAGAATGCTTTCACATCACTTCAGCTCCAAGGACCTCTTGGCTCTGGTAATGTGTTCT
TCCACTTGGCTATCAAAGGTTGAGCCACTTTCTGCCTGGTACAAGTTTAAATCCCATTAT
CACACACAACAGCCAGAGCAAGATAGAAAAAGAAGACAAGAAGATGAAGAACATAAACAA
AACATGAACCAGGGACCATCTATTGGCTCTCCAGCTCGAGTCCAGAAGCTTATTGCTTCC
CAATCAGATCCACTCCTTGCTAAAGAAATTTTTGATTTAGCCTCACGAGAACCCGATTTT
CAGCACTCCTATGCCACTTTCCACACTCTCATCCTCAAGCTTGGCCGTTCCCGGCAGTTC
TCCCTCATGCAGTCCGTCTTCTCTTCCCTAAAGTCACAGCATTATTCCATCTCCCCATCC
CTTTTTTCGCGCATCATCCAAATCTATGGTGATGCTGGCCTACCTGACAAAGCCCTTAAA
ACTTTCTATACTATCCTGGAATTCAATATGAAGCCCCTTCCGAAGCATCTCAACCTCATT
CTTGAAATCCTCGTAACGCATCGGAACTTTCTTCGCCCTGCTTTTGATCTCTTCAGATCT
GCACATACATACGGAGTTTTGGCCAACACCGAGTCCTACAACATTCTAATGCGGGCATTC
TGTTTGAATGATGATTTAAGTATTGCCTACTCGCTGTTTAATCAAATGTTTAAGAGAGAG
ATCAGTCCTAATGTAGAGTCATATAGGATTCTGATGCAGGGTTTGTGTCGAAAAAGTCAA
GTGAATACAGCTGTTGACTTGCTGGAGGATATGCTGAATAAAGGTTTTGTTCCCGATGCT
TTAAGTTATAGCACTCTATTGAATAGCTTGTGTCGGAAAAAGAAATTTAAGGAGGCTTAC
AAGCTTCTTTGCAGAATGAAAGTAAAGGGTTGCAATCCTGACATTGTCCATTACAATACA
GTAATTCTGGGGTTCTGTCGAGAAGGTCGTGCTGCTGATGCCTGTAAAATCCTCGAGGAC
ATGCCATCAAACGGGTGTCTTCCCAATTTGGTGTCTTATAGGACATTAGTTGGGGGTCTA
AGCAATCAGGGAATGTACGATGAGGCTAAGAATTACATGGTGGAAATGATGTCAAAAGGC
TTCTCTCCACATTTTTCTGTGGTTCACACGGTTGTGAAAGGTTTCTGTAACCTAGGTAAA
ATTGAGGAAGCTTGTGGAGTAGCGGGGAGTATTTTGAGTCATGGTGAACCCCTACATACA
GATACATGGGAAGAAATTGTATCCAGGATCTTGGAATGGGATGCTGCTGAAAAAATAGGG
AACACCTTGGTGGAACTTATTCAAGCCGAGATAAAACCTGAAATGAGAATAGTTGAGGCT
GGCGCTAGGTTGGGTGAATATTTGATGAACAGCATAAAAAGTAAATCAAGGAAGGGTTGA