Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067721
CDS Infomation

pacid=37465168 polypeptide=PGSC0003DMP400045719 locus=PGSC0003DMG400026338 ID=PGSC0003DMT400067721.v4.03 annot-version=v4.03
Sequence

ATGGCGGTGCGTGCAACAGTTACTCGGTTTCCGATTGACGTAGAGTCACTAGAGGAGTCA
GGGCTACCGTGGGGTGTAACAGTTTCACCGTTTGCTGCAAAGGATGAGAATGGGAATCCA
CCGGTTTATGGATCGGAAGGTCACTTACTACCGCGATGTGAGAATTGTTGGGGTTACTAT
AATACATACTGTGAGCAAGAGCAGTGGGCTTGGACTTGTTCCCTTTGTGGTACACTTAAT
GGACTATCTTCTGAGTCTGTCAGTCGTTATTCTCAACCTGAATCTTGCCCGGAGAATATA
TCTTCCTTTATTGACCTTGAATTGTCCATAGAAGAATCTGAGGAAATGCAGGCACGGCCT
GTTTATGTGGCAGCTGTTGATCTTGCTTCATCGGAGGAGTTTTTGGAACTTGTTAAAAGT
GCCCTTTTAGCTGCTTTAGAAGCTCTTGGGCCTGGATCACTATTTGGCTTGGCCACATTC
AGCCATAAAATAGGTTTGTATGATGTTCAAGGCCCCATTCCAGTGGTGAAGAATGTTTTC
ATTCCTCATGATTCTGATGGTACCTTGTCTATGGAACTTCAGGATGTCATGCCCCTATCT
TCATTTTTAGCTCCAGTGGATACCTGTAAGGACCGCATAGCGTCAGCACTTGAAACATTG
AGGCCAACAACTTCATGGGAAAGGACATCAGGTGCAGGTCAAGGGTTAGATGGAATTTTC
CTGGGCGGAAGGGGTTTTGGATCTGCAATGGAAGCCCTTTTCAATTATATTGGATCAGAA
TATGGAAATACATTTGCATTAGCTAGAGTTTTTGCTTTTCTTTCGGGTGCTCCTGATATT
GGAGCCGGCCAACTAGATACAAGACGGTATGGAGAGCAGTACGCTAGTAGACGAGAGGAT
GCAGATCGAGCTTTACTTCCCGAACAAACTCCGTTCTATAAAGATCTGGCTGCCGTGGCT
GTGCAATCAGGTGTTTGTGTAGACATATTTGCTGTGACAAATGAGTATACTGACTTGGCA
TCACTGAAGTTTCTGAGTATTGAGAGTGGAGGCTCCTTATTTTTGTATACGAGCACTGAT
GACTCCACACTTCCTCAAGACATGTACCGCATGTTAAGTCGACCATATGCTTTTAATTGT
GTCCTAAGGCTGAGGACTTCGTCTGAATTCCAGCAGAGTCATTCTTATGGGCATTTCTTC
CCAGATCCACAATATGAAAATGTCCAACACATAATTTGTTGTGATTCTTTCGCTACATAT
GCCTATGATTTTGAATTTGCGAATAATACTGGATTTTCCAGGCATACTTCAGAATTGCCT
ATGCTGCAAATTGCTTTTCAGTATACTGTTGTTGTCCCACCAGATGAACTTGCAAATGCA
GGATCAAATACTACAACAAGAGCAAAGCATTCTCTCAAAAAGAGATTAAGGATTCGAACT
CTTCAGTTTGGAGTAGGTCATAGCATAAATGAGATTTATGACTGTGTTGATTCTGAAGTG
GTGCTTTCATTACTTGTCCACAAGGTTATTCTAGCCTCGTTGGAGCAAGGTGTTCGAGAG
GGCAGAATGCTACTTCATGATTGGCTTGTTATTCTTACGGCTCAGTATAATGATGCTTGC
AAACTTATTCAGTCTGGGCATGGAGGTTCAAGTGGCGTTCACATTGATGTTGCATTTTCC
CAATGTCCTCAACTACAGCCTTTACCCCGCTTGGTTTTTGCTCTATTACGAAATCCTCTT
CTCCGTTTACACGAAGAAGGCGTGCATCCTGACTACCGAATATATCTTCAGTGTCTTTTT
AGTGCACTAGAACCTTCTTCTCTTAGTCGTGCTGTATATCCATTGTTAACCTCATATGCC
TCACCGGATACGCAAGCATATCCTCGACATTCCCTGAGCCGAGCTGCGCTGATTACAAGT
GGCAGTCCAATATTTTTCCTTGATGCATTCACAAATCTTATTGTGTTCTATTCCTCGACA
GCAGACCCTTCACTTCCGTTTCCGCCACCTCAGGACTGTTTACTGAGAACAACAATAAAC
AAGCTGAAGCAAGAGAGGTGTATCACACCGAAACTTTCATTTATCAAGGGAGGGCAGGAT
GATGCAACGGCGTTTGAGAATTATCTGATAGAGGAACAAGATGTTGAAGGAAGCGGCTTT
ACTAGTGTCATGGGTTTCGTTTCATTCCTCGAGGAGATTAACCAAAGCACATTGGAGTAC
TTGAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400045719
PEP Infomation

pacid=37465168 transcript=PGSC0003DMT400067721 locus=PGSC0003DMG400026338 ID=PGSC0003DMT400067721.v4.03 annot-version=v4.03
Sequence

MAVRATVTRFPIDVESLEESGLPWGVTVSPFAAKDENGNPPVYGSEGHLLPRCENCWGYY
NTYCEQEQWAWTCSLCGTLNGLSSESVSRYSQPESCPENISSFIDLELSIEESEEMQARP
VYVAAVDLASSEEFLELVKSALLAALEALGPGSLFGLATFSHKIGLYDVQGPIPVVKNVF
IPHDSDGTLSMELQDVMPLSSFLAPVDTCKDRIASALETLRPTTSWERTSGAGQGLDGIF
LGGRGFGSAMEALFNYIGSEYGNTFALARVFAFLSGAPDIGAGQLDTRRYGEQYASRRED
ADRALLPEQTPFYKDLAAVAVQSGVCVDIFAVTNEYTDLASLKFLSIESGGSLFLYTSTD
DSTLPQDMYRMLSRPYAFNCVLRLRTSSEFQQSHSYGHFFPDPQYENVQHIICCDSFATY
AYDFEFANNTGFSRHTSELPMLQIAFQYTVVVPPDELANAGSNTTTRAKHSLKKRLRIRT
LQFGVGHSINEIYDCVDSEVVLSLLVHKVILASLEQGVREGRMLLHDWLVILTAQYNDAC
KLIQSGHGGSSGVHIDVAFSQCPQLQPLPRLVFALLRNPLLRLHEEGVHPDYRIYLQCLF
SALEPSSLSRAVYPLLTSYASPDTQAYPRHSLSRAALITSGSPIFFLDAFTNLIVFYSST
ADPSLPFPPPQDCLLRTTINKLKQERCITPKLSFIKGGQDDATAFENYLIEEQDVEGSGF
TSVMGFVSFLEEINQSTLEYLK*

Transcript Sequence

Transcript ID

PGSC0003DMT400067721
Transcript Infomation

pacid=37465168 locus=PGSC0003DMG400026338 ID=PGSC0003DMT400067721.v4.03 annot-version=v4.03
Sequence

ATGGCGGTGCGTGCAACAGTTACTCGGTTTCCGATTGACGTAGAGTCACTAGAGGAGTCA
GGGCTACCGTGGGGTGTAACAGTTTCACCGTTTGCTGCAAAGGATGAGAATGGGAATCCA
CCGGTTTATGGATCGGAAGGTCACTTACTACCGCGATGTGAGAATTGTTGGGGTTACTAT
AATACATACTGTGAGCAAGAGCAGTGGGCTTGGACTTGTTCCCTTTGTGGTACACTTAAT
GGACTATCTTCTGAGTCTGTCAGTCGTTATTCTCAACCTGAATCTTGCCCGGAGAATATA
TCTTCCTTTATTGACCTTGAATTGTCCATAGAAGAATCTGAGGAAATGCAGGCACGGCCT
GTTTATGTGGCAGCTGTTGATCTTGCTTCATCGGAGGAGTTTTTGGAACTTGTTAAAAGT
GCCCTTTTAGCTGCTTTAGAAGCTCTTGGGCCTGGATCACTATTTGGCTTGGCCACATTC
AGCCATAAAATAGGTTTGTATGATGTTCAAGGCCCCATTCCAGTGGTGAAGAATGTTTTC
ATTCCTCATGATTCTGATGGTACCTTGTCTATGGAACTTCAGGATGTCATGCCCCTATCT
TCATTTTTAGCTCCAGTGGATACCTGTAAGGACCGCATAGCGTCAGCACTTGAAACATTG
AGGCCAACAACTTCATGGGAAAGGACATCAGGTGCAGGTCAAGGGTTAGATGGAATTTTC
CTGGGCGGAAGGGGTTTTGGATCTGCAATGGAAGCCCTTTTCAATTATATTGGATCAGAA
TATGGAAATACATTTGCATTAGCTAGAGTTTTTGCTTTTCTTTCGGGTGCTCCTGATATT
GGAGCCGGCCAACTAGATACAAGACGGTATGGAGAGCAGTACGCTAGTAGACGAGAGGAT
GCAGATCGAGCTTTACTTCCCGAACAAACTCCGTTCTATAAAGATCTGGCTGCCGTGGCT
GTGCAATCAGGTGTTTGTGTAGACATATTTGCTGTGACAAATGAGTATACTGACTTGGCA
TCACTGAAGTTTCTGAGTATTGAGAGTGGAGGCTCCTTATTTTTGTATACGAGCACTGAT
GACTCCACACTTCCTCAAGACATGTACCGCATGTTAAGTCGACCATATGCTTTTAATTGT
GTCCTAAGGCTGAGGACTTCGTCTGAATTCCAGCAGAGTCATTCTTATGGGCATTTCTTC
CCAGATCCACAATATGAAAATGTCCAACACATAATTTGTTGTGATTCTTTCGCTACATAT
GCCTATGATTTTGAATTTGCGAATAATACTGGATTTTCCAGGCATACTTCAGAATTGCCT
ATGCTGCAAATTGCTTTTCAGTATACTGTTGTTGTCCCACCAGATGAACTTGCAAATGCA
GGATCAAATACTACAACAAGAGCAAAGCATTCTCTCAAAAAGAGATTAAGGATTCGAACT
CTTCAGTTTGGAGTAGGTCATAGCATAAATGAGATTTATGACTGTGTTGATTCTGAAGTG
GTGCTTTCATTACTTGTCCACAAGGTTATTCTAGCCTCGTTGGAGCAAGGTGTTCGAGAG
GGCAGAATGCTACTTCATGATTGGCTTGTTATTCTTACGGCTCAGTATAATGATGCTTGC
AAACTTATTCAGTCTGGGCATGGAGGTTCAAGTGGCGTTCACATTGATGTTGCATTTTCC
CAATGTCCTCAACTACAGCCTTTACCCCGCTTGGTTTTTGCTCTATTACGAAATCCTCTT
CTCCGTTTACACGAAGAAGGCGTGCATCCTGACTACCGAATATATCTTCAGTGTCTTTTT
AGTGCACTAGAACCTTCTTCTCTTAGTCGTGCTGTATATCCATTGTTAACCTCATATGCC
TCACCGGATACGCAAGCATATCCTCGACATTCCCTGAGCCGAGCTGCGCTGATTACAAGT
GGCAGTCCAATATTTTTCCTTGATGCATTCACAAATCTTATTGTGTTCTATTCCTCGACA
GCAGACCCTTCACTTCCGTTTCCGCCACCTCAGGACTGTTTACTGAGAACAACAATAAAC
AAGCTGAAGCAAGAGAGGTGTATCACACCGAAACTTTCATTTATCAAGGGAGGGCAGGAT
GATGCAACGGCGTTTGAGAATTATCTGATAGAGGAACAAGATGTTGAAGGAAGCGGCTTT
ACTAGTGTCATGGGTTTCGTTTCATTCCTCGAGGAGATTAACCAAAGCACATTGGAGTAC
TTGAAATAA