Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067716
CDS Infomation

pacid=37467143 polypeptide=PGSC0003DMP400045714 locus=PGSC0003DMG400026336 ID=PGSC0003DMT400067716.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGAAGAATCGATTAGTCACCGTTGCTGCTCTGCAGTTTGCCTGTACCGACGAT
GTCTCCACCAACGTCGCTACCGCCGAGAGATTGGTTAGAGCTGCTCATCAGAAGGGTGCA
AATATCATCCTCATACAGGAGTTGTTCGAGGGCTATTACTTTTGTCAAGCACAAAAGGAG
GAGTTCTTTCATCGAGCAAAACCATATCAGGGGCATCCAACCATTGTCAGGATGCAAAAT
CTTGCGAAGGAGCTTGGAGTAGTTATTCCAGTTAGTTTCTTTGAAGAGGCAAATAATGCG
CATTACAATTCTGTGGCTATAATTGATGCTGATGGCACAGATCTTGGACTTTACAGGAAG
TCCCATATTCCTGATGGACCTGGTTATCAGGAAAAGTTTTACTTCAATCCCGGTGACACT
GGTTTTAAGGTATTCCAGACTAAATATGCAAAAATTGGAGTTGCAATTTGCTGGGATCAG
TGGTTTCCTGAGGCTGCTCGAGCTATGGCACTTCAAGGTGCAGAAGTATTGTTCTACCCT
ACTGCAATTGGTTCTGAACCTCAAGATGATGGACTTGATTCTCGGGATCACTGGAGGAGG
GTGATGCAAGGACACGCTGGTGCTAATGTGGTACCTTTAGTGGCGTCAAACCGCATTGGA
AAGGAGATAATTGAGACAGAACATGGGAATAGTGAGATAACATTCTACGGCTACTCTTTC
ATAGCAGGGCCCACTGGAGAGTTGGTAGCAGCTGCTGGTGATAAAGAGGAAGCTGTTCTT
GTAGCACAGTTTGATCTGGACAAAATCAAGTCCAAAAGGCATGGTTGGGGGGTGTATCGT
GATCGACGTCCTGATTTATATAAGGTTCTTTTGACATTAGATGGCAGCAACCCAGTCAAG
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400045714
PEP Infomation

pacid=37467143 transcript=PGSC0003DMT400067716 locus=PGSC0003DMG400026336 ID=PGSC0003DMT400067716.v4.03 annot-version=v4.03
Sequence

MAEKNRLVTVAALQFACTDDVSTNVATAERLVRAAHQKGANIILIQELFEGYYFCQAQKE
EFFHRAKPYQGHPTIVRMQNLAKELGVVIPVSFFEEANNAHYNSVAIIDADGTDLGLYRK
SHIPDGPGYQEKFYFNPGDTGFKVFQTKYAKIGVAICWDQWFPEAARAMALQGAEVLFYP
TAIGSEPQDDGLDSRDHWRRVMQGHAGANVVPLVASNRIGKEIIETEHGNSEITFYGYSF
IAGPTGELVAAAGDKEEAVLVAQFDLDKIKSKRHGWGVYRDRRPDLYKVLLTLDGSNPVK
*

Transcript Sequence

Transcript ID

PGSC0003DMT400067716
Transcript Infomation

pacid=37467143 locus=PGSC0003DMG400026336 ID=PGSC0003DMT400067716.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGAAGAATCGATTAGTCACCGTTGCTGCTCTGCAGTTTGCCTGTACCGACGAT
GTCTCCACCAACGTCGCTACCGCCGAGAGATTGGTTAGAGCTGCTCATCAGAAGGGTGCA
AATATCATCCTCATACAGGAGTTGTTCGAGGGCTATTACTTTTGTCAAGCACAAAAGGAG
GAGTTCTTTCATCGAGCAAAACCATATCAGGGGCATCCAACCATTGTCAGGATGCAAAAT
CTTGCGAAGGAGCTTGGAGTAGTTATTCCAGTTAGTTTCTTTGAAGAGGCAAATAATGCG
CATTACAATTCTGTGGCTATAATTGATGCTGATGGCACAGATCTTGGACTTTACAGGAAG
TCCCATATTCCTGATGGACCTGGTTATCAGGAAAAGTTTTACTTCAATCCCGGTGACACT
GGTTTTAAGGTATTCCAGACTAAATATGCAAAAATTGGAGTTGCAATTTGCTGGGATCAG
TGGTTTCCTGAGGCTGCTCGAGCTATGGCACTTCAAGGTGCAGAAGTATTGTTCTACCCT
ACTGCAATTGGTTCTGAACCTCAAGATGATGGACTTGATTCTCGGGATCACTGGAGGAGG
GTGATGCAAGGACACGCTGGTGCTAATGTGGTACCTTTAGTGGCGTCAAACCGCATTGGA
AAGGAGATAATTGAGACAGAACATGGGAATAGTGAGATAACATTCTACGGCTACTCTTTC
ATAGCAGGGCCCACTGGAGAGTTGGTAGCAGCTGCTGGTGATAAAGAGGAAGCTGTTCTT
GTAGCACAGTTTGATCTGGACAAAATCAAGTCCAAAAGGCATGGTTGGGGGGTGTATCGT
GATCGACGTCCTGATTTATATAAGGTTCTTTTGACATTAGATGGCAGCAACCCAGTCAAG
TGA