Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067689
CDS Infomation

pacid=37460652 polypeptide=PGSC0003DMP400045699 locus=PGSC0003DMG400026326 ID=PGSC0003DMT400067689.v4.03 annot-version=v4.03
Sequence

ATGATTTGCTGTGGAGGCGCAGAAGAAGACAGTTATATCAGCGGTCCACCGGTTAATCAA
AATACAGCACCTCCGAGAGCCGGCAATCCTTATGGTGGTGGAACGGGTGGTGGTAGTGAA
AGAGGAGAGCCAAGGAGTGCTGCTAAGAGTGGAGCTCCTCAGAAAGTTTTACCTATTGAG
GTACCAGAAATGTCCTTGGTTGAGCTAAACAGACTTACTGGCAACTTTGGAAAGAAAACT
CTCATTGGAGAGGGATCTTATGGCCGCGTTTTTGGTGCTAAATTAAGCAACGGCCAACAA
GCAGCAATAAAGAAATTGGATACTACTTCTTCACCAGAACCAGATTCTGACTTCACCGCC
CAGTTATCAATGGTTTCAAGACTTAAGCACGAGCATTTTGTAACACTGTTAGGATGTTGC
CTCGCAGCAAACAATCGGATCTTGGTTTATGAGTTTGCAACTATGGGCTCGCTGCATGAT
GTATTACATGGCAGAAAAGGAGTACAAGGTGCTGAGCCTGGTCCAGTTCTTACCTGGAAT
CAGAGAGTTAAAATTGCTTATGGTGCAGCTAGAGGACTTGAATATCTACACGAAAAAGTT
CAACCGCCAATTAAGCATCGGGATGTAAGATCCAGCAATGTACTACTCTTTGATGATTTT
ACTGCAAAGATTGCTGATTTCAACTTGACAAACCAGTGTTCGGACACAGCAGCACGTCTG
CATTCAACTAGAGTACTGGGGACATTTGGCTACCATGCTCCAGAGTATGCTATGACAGGA
CAGATAACACAGAAAAGTGATGTTTATAGTTTTGGAGTTGTTCTGTTAGAACTCTTGACA
GGAAGGAAACCAGTAGATCATACAATGCCAAAAGGGCAACAGAGTCTTGTCACATGGGCG
ACTCCACGACTAAGTGAAGATAAAGTAAAGCAGTGTGTAGATCCTAAGCTAAATAATGAG
TACCCTCCAAAGGCAATTGCTAAGATGGCAGCTGTTGCAGCACTTTGTGTTCAATACGAG
GCAGATTTCCGCCCAAACATGACAATTGTCGTCAAGGCACTGCAACCACTACTCAATGCA
AAACCAGCAGGAGCAGAGCCGCATGCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400045699
PEP Infomation

pacid=37460652 transcript=PGSC0003DMT400067689 locus=PGSC0003DMG400026326 ID=PGSC0003DMT400067689.v4.03 annot-version=v4.03
Sequence

MICCGGAEEDSYISGPPVNQNTAPPRAGNPYGGGTGGGSERGEPRSAAKSGAPQKVLPIE
VPEMSLVELNRLTGNFGKKTLIGEGSYGRVFGAKLSNGQQAAIKKLDTTSSPEPDSDFTA
QLSMVSRLKHEHFVTLLGCCLAANNRILVYEFATMGSLHDVLHGRKGVQGAEPGPVLTWN
QRVKIAYGAARGLEYLHEKVQPPIKHRDVRSSNVLLFDDFTAKIADFNLTNQCSDTAARL
HSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWA
TPRLSEDKVKQCVDPKLNNEYPPKAIAKMAAVAALCVQYEADFRPNMTIVVKALQPLLNA
KPAGAEPHA*

Transcript Sequence

Transcript ID

PGSC0003DMT400067689
Transcript Infomation

pacid=37460652 locus=PGSC0003DMG400026326 ID=PGSC0003DMT400067689.v4.03 annot-version=v4.03
Sequence

ATGATTTGCTGTGGAGGCGCAGAAGAAGACAGTTATATCAGCGGTCCACCGGTTAATCAA
AATACAGCACCTCCGAGAGCCGGCAATCCTTATGGTGGTGGAACGGGTGGTGGTAGTGAA
AGAGGAGAGCCAAGGAGTGCTGCTAAGAGTGGAGCTCCTCAGAAAGTTTTACCTATTGAG
GTACCAGAAATGTCCTTGGTTGAGCTAAACAGACTTACTGGCAACTTTGGAAAGAAAACT
CTCATTGGAGAGGGATCTTATGGCCGCGTTTTTGGTGCTAAATTAAGCAACGGCCAACAA
GCAGCAATAAAGAAATTGGATACTACTTCTTCACCAGAACCAGATTCTGACTTCACCGCC
CAGTTATCAATGGTTTCAAGACTTAAGCACGAGCATTTTGTAACACTGTTAGGATGTTGC
CTCGCAGCAAACAATCGGATCTTGGTTTATGAGTTTGCAACTATGGGCTCGCTGCATGAT
GTATTACATGGCAGAAAAGGAGTACAAGGTGCTGAGCCTGGTCCAGTTCTTACCTGGAAT
CAGAGAGTTAAAATTGCTTATGGTGCAGCTAGAGGACTTGAATATCTACACGAAAAAGTT
CAACCGCCAATTAAGCATCGGGATGTAAGATCCAGCAATGTACTACTCTTTGATGATTTT
ACTGCAAAGATTGCTGATTTCAACTTGACAAACCAGTGTTCGGACACAGCAGCACGTCTG
CATTCAACTAGAGTACTGGGGACATTTGGCTACCATGCTCCAGAGTATGCTATGACAGGA
CAGATAACACAGAAAAGTGATGTTTATAGTTTTGGAGTTGTTCTGTTAGAACTCTTGACA
GGAAGGAAACCAGTAGATCATACAATGCCAAAAGGGCAACAGAGTCTTGTCACATGGGCG
ACTCCACGACTAAGTGAAGATAAAGTAAAGCAGTGTGTAGATCCTAAGCTAAATAATGAG
TACCCTCCAAAGGCAATTGCTAAGATGGCAGCTGTTGCAGCACTTTGTGTTCAATACGAG
GCAGATTTCCGCCCAAACATGACAATTGTCGTCAAGGCACTGCAACCACTACTCAATGCA
AAACCAGCAGGAGCAGAGCCGCATGCATAG