Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067670
CDS Infomation

pacid=37469878 polypeptide=PGSC0003DMP400045685 locus=PGSC0003DMG402026315 ID=PGSC0003DMT400067670.v4.03 annot-version=v4.03
Sequence

ATGGATGAATATTCAAGCAAAAGAGCTGTTAATGGCCTTTACGTTCCCAGAAGAGGTTTG
ACGGACATAGCTGACAGCAGGGATGAAAATGTTCAGTTGTGCTCTCGATATGGATGCAGC
AGCCGGCACAACTCTATGAAGAGCCCGCAAGTTAGAAGTACAGAGAAACCAAGACCTCTC
AGGCCTTCTTTCACTTCTTCAAATGGAAAAGAAGTTGTTGGAAGTTCATGTAGGACACCC
TCTGTGATGGCTAATGCGAGAAAATCACTGAAGGACAGGAAAACAAATTCTCATGTTGGA
AATGATCAATCAGAAACGACTTGTTCACATGGTGAACCTGAAGCTTCGGAACACATGAAG
TCATCAAAAGCGCATCAACCCCAATTCAATTCAGTAATTCAAGATACTGGATCAAGTAAA
ATTACATTAAAAGAAGTAGGTTGCTCTAGTGGAGCTTCAAGCAGTAAACCTCGTAGATTA
TTTACTCCCAAGTATTCCAATCAAAATAGTCCAGTAGGTTCGTCTGTTTCTTCGTCGTCT
AAGGCCATTGGTGCAGGGACCAGGGGCACTGCTAGTGGGGCTGGATATGTGCCGACAAAT
CTAAAATGCAACTCACGATCAGATATCTCTCCACAAAGTTGTTCAACAGCTGATTCAAGA
TTTAGTAGAAGGGACATGGTAAAAAGAAGAAATTCAGATGGTGAAAGCACTTCATCCTCT
AAAGGGAAGAAAGTAAGTGGGGCATTACCAAAAGGAGGAGATGTCATTCGTCCAACTCGT
GGTATCTCAATTTCTGATTCAAGGAGTAGTAAAAACTTTGATATTAGGGAGGATAGTCGT
GCTGTATCAGTTAGGACTCGCAGGTCAATGAATGTGCCTAGGCTTAGAGATTCAGTACGA
GATTCGTCATCTGGCTTTTTCCAGAATTCACCTCAGCCTGAATCTCCAAATTTCAGTCTG
CAGTCATCAAGTCAATTTTTCTCAGATGCCTCTTCGAGTGATTCAAGTGCTTTTAGTTTT
CCTGGAAATGATGCTGAAGATCTCCCAGCTGGAGTGTCTGGAACTTCTGCACAACTAGGT
ATAAACCAATTAATGAACCGTGATGCCTTGCAGCGATATAACATGGATGGAGTTGCTCAG
GTATTAGTGGCACTTGAAAGAATGGAACAAGATGAAGAATTAACATATGAGCAACTACTT
GTGTTGGAGACCAACTTGTTTCTCGGTGGCCTCAACTTCTACGACCAGCATAGAGGAATG
AGGCTGGATATAGACAATATGTCCTATGAGGAATTATTAGCTCTCGAGGAGAGGATGGGG
AGTGTTAGCACTGCTCTGTCAGAGGAGGCATTGTCAAAGTGCATCCAGAAAAGCATTTAT
CAGGCTATGCCTTCAGAAATAGGGGAATTTGGAAGCGACGAGAATGAAGATGAGGTCAAA
TGCACTATTTGTCAGGAGGAGTATGTGATTGGAGATGAAATAGGAAGGTTGGAATGTGAT
CATGGGTATCATGTGGTGTGTGTAAAACATTGGTTGAGTCTCAAGAATTGGTGTCCTATA
TGCAAAGCTTCAGCAGCTCCATCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400045685
PEP Infomation

pacid=37469878 transcript=PGSC0003DMT400067670 locus=PGSC0003DMG402026315 ID=PGSC0003DMT400067670.v4.03 annot-version=v4.03
Sequence

MDEYSSKRAVNGLYVPRRGLTDIADSRDENVQLCSRYGCSSRHNSMKSPQVRSTEKPRPL
RPSFTSSNGKEVVGSSCRTPSVMANARKSLKDRKTNSHVGNDQSETTCSHGEPEASEHMK
SSKAHQPQFNSVIQDTGSSKITLKEVGCSSGASSSKPRRLFTPKYSNQNSPVGSSVSSSS
KAIGAGTRGTASGAGYVPTNLKCNSRSDISPQSCSTADSRFSRRDMVKRRNSDGESTSSS
KGKKVSGALPKGGDVIRPTRGISISDSRSSKNFDIREDSRAVSVRTRRSMNVPRLRDSVR
DSSSGFFQNSPQPESPNFSLQSSSQFFSDASSSDSSAFSFPGNDAEDLPAGVSGTSAQLG
INQLMNRDALQRYNMDGVAQVLVALERMEQDEELTYEQLLVLETNLFLGGLNFYDQHRGM
RLDIDNMSYEELLALEERMGSVSTALSEEALSKCIQKSIYQAMPSEIGEFGSDENEDEVK
CTICQEEYVIGDEIGRLECDHGYHVVCVKHWLSLKNWCPICKASAAPS*

Transcript Sequence

Transcript ID

PGSC0003DMT400067670
Transcript Infomation

pacid=37469878 locus=PGSC0003DMG402026315 ID=PGSC0003DMT400067670.v4.03 annot-version=v4.03
Sequence

ATGGATGAATATTCAAGCAAAAGAGCTGTTAATGGCCTTTACGTTCCCAGAAGAGGTTTG
ACGGACATAGCTGACAGCAGGGATGAAAATGTTCAGTTGTGCTCTCGATATGGATGCAGC
AGCCGGCACAACTCTATGAAGAGCCCGCAAGTTAGAAGTACAGAGAAACCAAGACCTCTC
AGGCCTTCTTTCACTTCTTCAAATGGAAAAGAAGTTGTTGGAAGTTCATGTAGGACACCC
TCTGTGATGGCTAATGCGAGAAAATCACTGAAGGACAGGAAAACAAATTCTCATGTTGGA
AATGATCAATCAGAAACGACTTGTTCACATGGTGAACCTGAAGCTTCGGAACACATGAAG
TCATCAAAAGCGCATCAACCCCAATTCAATTCAGTAATTCAAGATACTGGATCAAGTAAA
ATTACATTAAAAGAAGTAGGTTGCTCTAGTGGAGCTTCAAGCAGTAAACCTCGTAGATTA
TTTACTCCCAAGTATTCCAATCAAAATAGTCCAGTAGGTTCGTCTGTTTCTTCGTCGTCT
AAGGCCATTGGTGCAGGGACCAGGGGCACTGCTAGTGGGGCTGGATATGTGCCGACAAAT
CTAAAATGCAACTCACGATCAGATATCTCTCCACAAAGTTGTTCAACAGCTGATTCAAGA
TTTAGTAGAAGGGACATGGTAAAAAGAAGAAATTCAGATGGTGAAAGCACTTCATCCTCT
AAAGGGAAGAAAGTAAGTGGGGCATTACCAAAAGGAGGAGATGTCATTCGTCCAACTCGT
GGTATCTCAATTTCTGATTCAAGGAGTAGTAAAAACTTTGATATTAGGGAGGATAGTCGT
GCTGTATCAGTTAGGACTCGCAGGTCAATGAATGTGCCTAGGCTTAGAGATTCAGTACGA
GATTCGTCATCTGGCTTTTTCCAGAATTCACCTCAGCCTGAATCTCCAAATTTCAGTCTG
CAGTCATCAAGTCAATTTTTCTCAGATGCCTCTTCGAGTGATTCAAGTGCTTTTAGTTTT
CCTGGAAATGATGCTGAAGATCTCCCAGCTGGAGTGTCTGGAACTTCTGCACAACTAGGT
ATAAACCAATTAATGAACCGTGATGCCTTGCAGCGATATAACATGGATGGAGTTGCTCAG
GTATTAGTGGCACTTGAAAGAATGGAACAAGATGAAGAATTAACATATGAGCAACTACTT
GTGTTGGAGACCAACTTGTTTCTCGGTGGCCTCAACTTCTACGACCAGCATAGAGGAATG
AGGCTGGATATAGACAATATGTCCTATGAGGAATTATTAGCTCTCGAGGAGAGGATGGGG
AGTGTTAGCACTGCTCTGTCAGAGGAGGCATTGTCAAAGTGCATCCAGAAAAGCATTTAT
CAGGCTATGCCTTCAGAAATAGGGGAATTTGGAAGCGACGAGAATGAAGATGAGGTCAAA
TGCACTATTTGTCAGGAGGAGTATGTGATTGGAGATGAAATAGGAAGGTTGGAATGTGAT
CATGGGTATCATGTGGTGTGTGTAAAACATTGGTTGAGTCTCAAGAATTGGTGTCCTATA
TGCAAAGCTTCAGCAGCTCCATCTTAA