Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067640
CDS Infomation

pacid=37470648 polypeptide=PGSC0003DMP400045659 locus=PGSC0003DMG400026304 ID=PGSC0003DMT400067640.v4.03 annot-version=v4.03
Sequence

ATGCAAGATCTTCAATCCCCACCACCCCCTTCACCACAGTCCACTCACGCGCCACCACGC
TCCGCCACAGACCTATTCGGAGACCCAACTGACCCAAATCCACCACAATGGCTAAACCCC
ACATTGTTCCAATCTCAAGATTTCGATCCAGAATCATATATCTCCGATTTACGCACCTTT
GTTCCCCTTGAAACTCTCCGTTCGGAGCTCCGTTCTCACTTCACGTCGCTTCAGCGTGAC
CTTGTGGATCTCATCAATCGAGATTATGCTGATTTTGTTAGCCTTAGTACGAAGCTTACT
GATGTTGATGCTTCTGTTGTACGTATGAGGGCTCCGTTGTTTGAGATCAGGGAGAAAATT
GATGGTTTTCGTAATGCTGTTGAAGGGTCTCTTGCTGCTTTACAAAACAGGCTTAAACAA
AGAGCTGATGCTGGAGAAGCCAGGGAAGTTCTTGAACTTTTGCTTGATACTTTTCATGTT
GTTTCTAAAGTTGAAAAATTGATTAAGGAGTTACCAAGTGGACAAACTGATTATGTTGAG
AGTGGATCTAATTTGAGGGAAACTCAAAGTATGTTACTAGAGAGAATTGCTAGTGAAATG
AATAGGCTAAAATTTTATATTTCTCATGCACAGAATATGCCTTTTATTGAGAATATGGAG
AAGAGAATACAGAATGCTAGTTCTTTATTAGATACAAGCTTAGGACATTGTCTTGTAGAT
GGACTTGAATATAGGGATGCTAATGCTATATATAACTGCCTGCGTGCGTATGCTGCCATT
GATAATACCAAGAATGCGGAGGAAACTTTTCGATCGACTATAGTGGGACCTTTGATCCAA
AAAGTTATCCCGCAAAATCCATCTGGAGTTGTTGGTGGATCATCTGGACATGAACTTGAG
GAGGATTATGTTAAGATCAAGCAATATATAGAGGATGATTGTAAGTTTCTATTGGATATA
TCCTCTATTGAGAATTCGGGTCTACATGTTTCTAGCTTCCTTGCGAATTCTATCCTTAAA
GAGGTTCACTCCGCTATCCAAAAAGGAAAACCAGTGGTGTTCTCTCCCGGAAGGCCTACT
GTGTTTCTAAAAAATTACAAAGCAAGCTTGGATTTCCTGGCACATTTAGAAGGTTACTGT
CCCTCACGATCTGAAGTAGTCAAGTTTCGGTCTGAAGCTGCATATATTGAGTTCATGAAG
CAATGGAATGTGGGTGTCTATTTCTCATTGAGGTTCCAAGAGATAGCTGGGGCTCTTGAT
TCTGCACTTAGTGTTGCTGGTCTTGTCCCAGTGGCCTCTGATCAGAGGAAGCCTCAAGAA
TTGATTTTGAAGCAGAGTATTGCTCTTTTAGAGTGCTTAAGATCTTGCTGGAGAGATGAT
GTTCTTGTCCTATCTTGCTCAGACAGGTTCTTGCGTTTGTCTTTGCAACTTATGTCCAGA
TTCTCAAGCTGGTTATCTGCCGGATTGGCTGCTCGTAAAGCTGGTAATGTGGGCTCAAAC
CCAGGATTTGAATGGGCTATTTCTGCAGTCCCTGACGATTTAGTATACGTAGTTCACGAT
TTGAACCGTTTGGGGGAGGATGTGTGTGGTGATTACCTTGAACACATACTTGAGTTGCTC
AAGTCATGCCCTGCTGAAGTTTGTGATTTTGTAAAACAGAGTATTTTACAAGGTGGGAAG
TCCCTGAAGGGTCTTTTACCAATTGTGATGAGTGCAATCATTGAGACAATAGTTGAGAAA
TCTGTAGAGGACTTGAGGCAATTGAAAGGGATAACTGCTACCTACAGGATGACTAACAAG
CCTCTCCCAGTCAGGCATTCTCCATATGTCTCTGGAGTATTGCGTCCGTTGAAGGAATTT
TTGGAGGGAGAAAGGGCTGCAACATGTCTGACAAATGAGACGAGGAATGAGCTCTTGCAA
GGTGCTGCTTTGGAAATAACTCACCGTTACAATGATTTAACTTCAGAACTTGTGAATATG
AGTAGAAGAACGGAATCTTCTCTTCAAAAACTACGTTTGGGTGCTCAAAGACGAGCTGGA
GCAAGCTCAGATGTTTCGGATCACAATTTGTCTGAAACTGACAAAATCTGCATGCAATTA
TTTCTTGATATTCAGGAATATGCTCGGAGCCTTTCATTACTTGGGGTGGATGCAGCTAGT
ATTCCACCTTATCAATCATTATGGCAGTGTGTTGCCCCTGCCGAGAGAAAAAACACAATA
AGCTTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400045659
PEP Infomation

pacid=37470648 transcript=PGSC0003DMT400067640 locus=PGSC0003DMG400026304 ID=PGSC0003DMT400067640.v4.03 annot-version=v4.03
Sequence

MQDLQSPPPPSPQSTHAPPRSATDLFGDPTDPNPPQWLNPTLFQSQDFDPESYISDLRTF
VPLETLRSELRSHFTSLQRDLVDLINRDYADFVSLSTKLTDVDASVVRMRAPLFEIREKI
DGFRNAVEGSLAALQNRLKQRADAGEAREVLELLLDTFHVVSKVEKLIKELPSGQTDYVE
SGSNLRETQSMLLERIASEMNRLKFYISHAQNMPFIENMEKRIQNASSLLDTSLGHCLVD
GLEYRDANAIYNCLRAYAAIDNTKNAEETFRSTIVGPLIQKVIPQNPSGVVGGSSGHELE
EDYVKIKQYIEDDCKFLLDISSIENSGLHVSSFLANSILKEVHSAIQKGKPVVFSPGRPT
VFLKNYKASLDFLAHLEGYCPSRSEVVKFRSEAAYIEFMKQWNVGVYFSLRFQEIAGALD
SALSVAGLVPVASDQRKPQELILKQSIALLECLRSCWRDDVLVLSCSDRFLRLSLQLMSR
FSSWLSAGLAARKAGNVGSNPGFEWAISAVPDDLVYVVHDLNRLGEDVCGDYLEHILELL
KSCPAEVCDFVKQSILQGGKSLKGLLPIVMSAIIETIVEKSVEDLRQLKGITATYRMTNK
PLPVRHSPYVSGVLRPLKEFLEGERAATCLTNETRNELLQGAALEITHRYNDLTSELVNM
SRRTESSLQKLRLGAQRRAGASSDVSDHNLSETDKICMQLFLDIQEYARSLSLLGVDAAS
IPPYQSLWQCVAPAERKNTISF*

Transcript Sequence

Transcript ID

PGSC0003DMT400067640
Transcript Infomation

pacid=37470648 locus=PGSC0003DMG400026304 ID=PGSC0003DMT400067640.v4.03 annot-version=v4.03
Sequence

ATGCAAGATCTTCAATCCCCACCACCCCCTTCACCACAGTCCACTCACGCGCCACCACGC
TCCGCCACAGACCTATTCGGAGACCCAACTGACCCAAATCCACCACAATGGCTAAACCCC
ACATTGTTCCAATCTCAAGATTTCGATCCAGAATCATATATCTCCGATTTACGCACCTTT
GTTCCCCTTGAAACTCTCCGTTCGGAGCTCCGTTCTCACTTCACGTCGCTTCAGCGTGAC
CTTGTGGATCTCATCAATCGAGATTATGCTGATTTTGTTAGCCTTAGTACGAAGCTTACT
GATGTTGATGCTTCTGTTGTACGTATGAGGGCTCCGTTGTTTGAGATCAGGGAGAAAATT
GATGGTTTTCGTAATGCTGTTGAAGGGTCTCTTGCTGCTTTACAAAACAGGCTTAAACAA
AGAGCTGATGCTGGAGAAGCCAGGGAAGTTCTTGAACTTTTGCTTGATACTTTTCATGTT
GTTTCTAAAGTTGAAAAATTGATTAAGGAGTTACCAAGTGGACAAACTGATTATGTTGAG
AGTGGATCTAATTTGAGGGAAACTCAAAGTATGTTACTAGAGAGAATTGCTAGTGAAATG
AATAGGCTAAAATTTTATATTTCTCATGCACAGAATATGCCTTTTATTGAGAATATGGAG
AAGAGAATACAGAATGCTAGTTCTTTATTAGATACAAGCTTAGGACATTGTCTTGTAGAT
GGACTTGAATATAGGGATGCTAATGCTATATATAACTGCCTGCGTGCGTATGCTGCCATT
GATAATACCAAGAATGCGGAGGAAACTTTTCGATCGACTATAGTGGGACCTTTGATCCAA
AAAGTTATCCCGCAAAATCCATCTGGAGTTGTTGGTGGATCATCTGGACATGAACTTGAG
GAGGATTATGTTAAGATCAAGCAATATATAGAGGATGATTGTAAGTTTCTATTGGATATA
TCCTCTATTGAGAATTCGGGTCTACATGTTTCTAGCTTCCTTGCGAATTCTATCCTTAAA
GAGGTTCACTCCGCTATCCAAAAAGGAAAACCAGTGGTGTTCTCTCCCGGAAGGCCTACT
GTGTTTCTAAAAAATTACAAAGCAAGCTTGGATTTCCTGGCACATTTAGAAGGTTACTGT
CCCTCACGATCTGAAGTAGTCAAGTTTCGGTCTGAAGCTGCATATATTGAGTTCATGAAG
CAATGGAATGTGGGTGTCTATTTCTCATTGAGGTTCCAAGAGATAGCTGGGGCTCTTGAT
TCTGCACTTAGTGTTGCTGGTCTTGTCCCAGTGGCCTCTGATCAGAGGAAGCCTCAAGAA
TTGATTTTGAAGCAGAGTATTGCTCTTTTAGAGTGCTTAAGATCTTGCTGGAGAGATGAT
GTTCTTGTCCTATCTTGCTCAGACAGGTTCTTGCGTTTGTCTTTGCAACTTATGTCCAGA
TTCTCAAGCTGGTTATCTGCCGGATTGGCTGCTCGTAAAGCTGGTAATGTGGGCTCAAAC
CCAGGATTTGAATGGGCTATTTCTGCAGTCCCTGACGATTTAGTATACGTAGTTCACGAT
TTGAACCGTTTGGGGGAGGATGTGTGTGGTGATTACCTTGAACACATACTTGAGTTGCTC
AAGTCATGCCCTGCTGAAGTTTGTGATTTTGTAAAACAGAGTATTTTACAAGGTGGGAAG
TCCCTGAAGGGTCTTTTACCAATTGTGATGAGTGCAATCATTGAGACAATAGTTGAGAAA
TCTGTAGAGGACTTGAGGCAATTGAAAGGGATAACTGCTACCTACAGGATGACTAACAAG
CCTCTCCCAGTCAGGCATTCTCCATATGTCTCTGGAGTATTGCGTCCGTTGAAGGAATTT
TTGGAGGGAGAAAGGGCTGCAACATGTCTGACAAATGAGACGAGGAATGAGCTCTTGCAA
GGTGCTGCTTTGGAAATAACTCACCGTTACAATGATTTAACTTCAGAACTTGTGAATATG
AGTAGAAGAACGGAATCTTCTCTTCAAAAACTACGTTTGGGTGCTCAAAGACGAGCTGGA
GCAAGCTCAGATGTTTCGGATCACAATTTGTCTGAAACTGACAAAATCTGCATGCAATTA
TTTCTTGATATTCAGGAATATGCTCGGAGCCTTTCATTACTTGGGGTGGATGCAGCTAGT
ATTCCACCTTATCAATCATTATGGCAGTGTGTTGCCCCTGCCGAGAGAAAAAACACAATA
AGCTTCTAG