Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067628
CDS Infomation

pacid=37471365 polypeptide=PGSC0003DMP400045647 locus=PGSC0003DMG400026296 ID=PGSC0003DMT400067628.v4.03 annot-version=v4.03
Sequence

ATGGATAATTCCCTCACAACAAGGTCTCGCAATAAATTTTGGTTTGTTTTCTTTTTTTTG
TTTGTTTCTTGGTACTTATTGCTTTATGGAATTGATTGGTCTTCTTTACATGGTATTGTA
ACAACGTCACAATACGAAGTGAATTCAATTGAATCCTTTCGTCCAACTTCTATTCCTCTG
CCTCCACCTCATGTTGATGTTAGCTCCAATTTCAATTCTACAAGTGATGATAATGCCACC
AACGAGACACGATCCAAGGAGGAAGAATCGTTGTCTAATGAAAATGATAATGCGGTGGTA
CCTGATTTGGAGGAACTCCAGAAAGAATTGGAACTTTTTTTAAGAAAAATCGAACCTCCA
AAAGAAGAAAAGAAGTTTGAGAAAAAAATCGAAAAAAAGGATGATAACAGGGGAGGAAAA
TGTGCAGGACGACATATATATGTTGCAGAAATACCTAGTAAGTTCAATGAAATTATGTTG
AAGGAATGTAAATTGTTGAATAAATGGGAAGATATGTGTCAATATTTGGTGAATATGGGG
CTTGGTCCTGATCTTGGAAACCCACAAAGGATTTTTTCGAACAAAGGTTGGTATACTACA
AATCAATTTTCGTTAGAAGTCCTGTTTCATAACAGAATGAAACAGTACGATTGTCTAACG
AATGATTCATCTGAAGCATCAGCAGTTTTCGTGCCATACTATTCAGGGTTCGATGTTGCT
AGATACTTATGGGATGATTTCAACACATCAATAAGGGATGCAAGTGCAATTGAGGTCGCG
AAATTTCTTAGAGAAAAACCCGAATGGGAGACAATGTGGGGAAGAGATCATTTCATGATT
GCTGGTAGAATTACTTGGGATTTTAGGAGAGGTATTGAGGAAGATGCAGCTTGGGGGAAC
AAGTTAATGTTGTTACCTGAGGCACAGAACATGACAATCTTAACAATCGAATCGAGTCCT
TGGAACAGGAATGATGTCGCCATTCCATATCCAACGTATTTCCATCCTTCAAGTGACAGT
GATGTAGTCCAGTGGCAGAACAGGATGGGGAGGTTAAGGAGGAAGGTGTTGTTTTCATTC
GCGGGTGCTCCACGTCCTCAACTTGAGGACTCAATAAGAAGTGAAATCATGGAACAATGC
TCAGCCACGAGGCGAAAATGCAAGCTATTGGAGTGTAAGGACTTACACAACAAATGCACC
AAGCCTGTACATGTAATGAGGTTGTTTCAAAGTTCAATCTTTTGCTTACAACCCTCAGGG
GATTCGTTCACTAGGAGGTCTACTTTCGATTCAATTTTGGCTGGTTGTATCCCAGTGTTT
TTCACTCCTGGATCCGCGTATGTCCAATATATATGGCACTTACCAAAAGATTACACCAAA
TACTCGGTGCTTATTCCGGAAGATGATGTTAGGAAAAAGAAAGTGAGCATTGAAAATGTA
CTATCTAAAATACCAAAATCACAAGTAGCAGCAATGAGAGAGGAAGTGATAAAGCTTATA
CCAAATGTAGTTTATGCAGATCCAAGATCAAGATTGGAGACAGTTAAAGATGCATTTGAT
TTGGCAGTGAAAGGGGTTCTTGGAAGAGTGGATGTAATAAGAAAAGAGATGAGACAAGGC
AAGAATTCAAGTATGGTGTTTGATGAAGAATATAGCTGGAAGTATCATACTTTTGGGACA
TTAGAAAAGCATGAGTGGGATAATTTCTTTTTGAGAACCAACAAAGAGAAGTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400045647
PEP Infomation

pacid=37471365 transcript=PGSC0003DMT400067628 locus=PGSC0003DMG400026296 ID=PGSC0003DMT400067628.v4.03 annot-version=v4.03
Sequence

MDNSLTTRSRNKFWFVFFFLFVSWYLLLYGIDWSSLHGIVTTSQYEVNSIESFRPTSIPL
PPPHVDVSSNFNSTSDDNATNETRSKEEESLSNENDNAVVPDLEELQKELELFLRKIEPP
KEEKKFEKKIEKKDDNRGGKCAGRHIYVAEIPSKFNEIMLKECKLLNKWEDMCQYLVNMG
LGPDLGNPQRIFSNKGWYTTNQFSLEVLFHNRMKQYDCLTNDSSEASAVFVPYYSGFDVA
RYLWDDFNTSIRDASAIEVAKFLREKPEWETMWGRDHFMIAGRITWDFRRGIEEDAAWGN
KLMLLPEAQNMTILTIESSPWNRNDVAIPYPTYFHPSSDSDVVQWQNRMGRLRRKVLFSF
AGAPRPQLEDSIRSEIMEQCSATRRKCKLLECKDLHNKCTKPVHVMRLFQSSIFCLQPSG
DSFTRRSTFDSILAGCIPVFFTPGSAYVQYIWHLPKDYTKYSVLIPEDDVRKKKVSIENV
LSKIPKSQVAAMREEVIKLIPNVVYADPRSRLETVKDAFDLAVKGVLGRVDVIRKEMRQG
KNSSMVFDEEYSWKYHTFGTLEKHEWDNFFLRTNKEKY*

Transcript Sequence

Transcript ID

PGSC0003DMT400067628
Transcript Infomation

pacid=37471365 locus=PGSC0003DMG400026296 ID=PGSC0003DMT400067628.v4.03 annot-version=v4.03
Sequence

ATGGATAATTCCCTCACAACAAGGTCTCGCAATAAATTTTGGTTTGTTTTCTTTTTTTTG
TTTGTTTCTTGGTACTTATTGCTTTATGGAATTGATTGGTCTTCTTTACATGGTATTGTA
ACAACGTCACAATACGAAGTGAATTCAATTGAATCCTTTCGTCCAACTTCTATTCCTCTG
CCTCCACCTCATGTTGATGTTAGCTCCAATTTCAATTCTACAAGTGATGATAATGCCACC
AACGAGACACGATCCAAGGAGGAAGAATCGTTGTCTAATGAAAATGATAATGCGGTGGTA
CCTGATTTGGAGGAACTCCAGAAAGAATTGGAACTTTTTTTAAGAAAAATCGAACCTCCA
AAAGAAGAAAAGAAGTTTGAGAAAAAAATCGAAAAAAAGGATGATAACAGGGGAGGAAAA
TGTGCAGGACGACATATATATGTTGCAGAAATACCTAGTAAGTTCAATGAAATTATGTTG
AAGGAATGTAAATTGTTGAATAAATGGGAAGATATGTGTCAATATTTGGTGAATATGGGG
CTTGGTCCTGATCTTGGAAACCCACAAAGGATTTTTTCGAACAAAGGTTGGTATACTACA
AATCAATTTTCGTTAGAAGTCCTGTTTCATAACAGAATGAAACAGTACGATTGTCTAACG
AATGATTCATCTGAAGCATCAGCAGTTTTCGTGCCATACTATTCAGGGTTCGATGTTGCT
AGATACTTATGGGATGATTTCAACACATCAATAAGGGATGCAAGTGCAATTGAGGTCGCG
AAATTTCTTAGAGAAAAACCCGAATGGGAGACAATGTGGGGAAGAGATCATTTCATGATT
GCTGGTAGAATTACTTGGGATTTTAGGAGAGGTATTGAGGAAGATGCAGCTTGGGGGAAC
AAGTTAATGTTGTTACCTGAGGCACAGAACATGACAATCTTAACAATCGAATCGAGTCCT
TGGAACAGGAATGATGTCGCCATTCCATATCCAACGTATTTCCATCCTTCAAGTGACAGT
GATGTAGTCCAGTGGCAGAACAGGATGGGGAGGTTAAGGAGGAAGGTGTTGTTTTCATTC
GCGGGTGCTCCACGTCCTCAACTTGAGGACTCAATAAGAAGTGAAATCATGGAACAATGC
TCAGCCACGAGGCGAAAATGCAAGCTATTGGAGTGTAAGGACTTACACAACAAATGCACC
AAGCCTGTACATGTAATGAGGTTGTTTCAAAGTTCAATCTTTTGCTTACAACCCTCAGGG
GATTCGTTCACTAGGAGGTCTACTTTCGATTCAATTTTGGCTGGTTGTATCCCAGTGTTT
TTCACTCCTGGATCCGCGTATGTCCAATATATATGGCACTTACCAAAAGATTACACCAAA
TACTCGGTGCTTATTCCGGAAGATGATGTTAGGAAAAAGAAAGTGAGCATTGAAAATGTA
CTATCTAAAATACCAAAATCACAAGTAGCAGCAATGAGAGAGGAAGTGATAAAGCTTATA
CCAAATGTAGTTTATGCAGATCCAAGATCAAGATTGGAGACAGTTAAAGATGCATTTGAT
TTGGCAGTGAAAGGGGTTCTTGGAAGAGTGGATGTAATAAGAAAAGAGATGAGACAAGGC
AAGAATTCAAGTATGGTGTTTGATGAAGAATATAGCTGGAAGTATCATACTTTTGGGACA
TTAGAAAAGCATGAGTGGGATAATTTCTTTTTGAGAACCAACAAAGAGAAGTACTAA