Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067578
CDS Infomation

pacid=37467679 polypeptide=PGSC0003DMP400045612 locus=PGSC0003DMG400026275 ID=PGSC0003DMT400067578.v4.03 annot-version=v4.03
Sequence

ATGTCAACGAGTGAGAGTAACTCCGAGCTTCTCCAAGCTCAAACTCAAATTTGGAACCAT
ATTTTCTCCTTTATGAGTTCTTCAGCGTTAAGATGTGCAGTTCAATTAGACATTCCTGAT
ATTCTTTACAAACATGGTAAGCCTATGCATCTTTCTGATCTCTCTACTGAACTTTCCCTC
ATAATAGACCCTTCTAAGATCTCCTTCTTGCCAAATTTAATGCGATTTTTAGTTCATTCT
GGTATAATAGAACAACATGATCATGATTACTATTCTCTTACCCCTTCTAGTCGTTTTCTT
GTGAAAGATGAGCCCTTTAATTTGAGATCACTCGTGCTTCTCACCCATGATCCATCCGTT
CAAAAAGCATGGTTTGAGTTAGGTAATTGGTACAAAAATGATATTCCCACCTCATTTCAT
ACTGCTAATGGAAAATATTTCTGGGATTACTTTTCGAAAGAACCAAAATTAGGTGATATT
TTCAATGATGTAATGGCTAGTGAGTCGGGATTGATTGTCAATATGCTTATCACGGAGTGT
AGGCACGTTTTTGAGGGGTTGACATCATTGGTAGACGTTGGAGGTGGCACTGGCACGATG
GCGATCGCCATAGCCAAAGCTTTTCCTTCCATAAATTGCATTGTATTTGATCTTCCACAT
GTTATAGAGGACCTCAAGAGCAATGGAAACATGGAGTTTGTTGGAGGTGACATGTTTCAA
AAGATTCCTAATGCTAATGCAATCTTACTCAAGTGGATTTTACATAACTGGAATGACGAA
GATTGTGTGAAGATACTGAAAAAATGCAAAGAGTCAATTCCGAGTAGGGATGAAGGGGGG
AAATTGATCATTATTGACATTGTGTTGGAAGATCCAAAGAACATGAGTGACTATGTTCGA
GCACAACATAATATGGATATGATGATGATGGTTTGTTTTGCTGCTAAAGAGAGAACTAAG
AAGGAATGGGAAAAACTCTTCAATGAAGCTGGTTTCAATGAATGCAAAATAACATCCATT
CCGGGTTCAAGATCTCTGATTGAAGTATATCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045612
PEP Infomation

pacid=37467679 transcript=PGSC0003DMT400067578 locus=PGSC0003DMG400026275 ID=PGSC0003DMT400067578.v4.03 annot-version=v4.03
Sequence

MSTSESNSELLQAQTQIWNHIFSFMSSSALRCAVQLDIPDILYKHGKPMHLSDLSTELSL
IIDPSKISFLPNLMRFLVHSGIIEQHDHDYYSLTPSSRFLVKDEPFNLRSLVLLTHDPSV
QKAWFELGNWYKNDIPTSFHTANGKYFWDYFSKEPKLGDIFNDVMASESGLIVNMLITEC
RHVFEGLTSLVDVGGGTGTMAIAIAKAFPSINCIVFDLPHVIEDLKSNGNMEFVGGDMFQ
KIPNANAILLKWILHNWNDEDCVKILKKCKESIPSRDEGGKLIIIDIVLEDPKNMSDYVR
AQHNMDMMMMVCFAAKERTKKEWEKLFNEAGFNECKITSIPGSRSLIEVYP*

Transcript Sequence

Transcript ID

PGSC0003DMT400067578
Transcript Infomation

pacid=37467679 locus=PGSC0003DMG400026275 ID=PGSC0003DMT400067578.v4.03 annot-version=v4.03
Sequence

ATGTCAACGAGTGAGAGTAACTCCGAGCTTCTCCAAGCTCAAACTCAAATTTGGAACCAT
ATTTTCTCCTTTATGAGTTCTTCAGCGTTAAGATGTGCAGTTCAATTAGACATTCCTGAT
ATTCTTTACAAACATGGTAAGCCTATGCATCTTTCTGATCTCTCTACTGAACTTTCCCTC
ATAATAGACCCTTCTAAGATCTCCTTCTTGCCAAATTTAATGCGATTTTTAGTTCATTCT
GGTATAATAGAACAACATGATCATGATTACTATTCTCTTACCCCTTCTAGTCGTTTTCTT
GTGAAAGATGAGCCCTTTAATTTGAGATCACTCGTGCTTCTCACCCATGATCCATCCGTT
CAAAAAGCATGGTTTGAGTTAGGTAATTGGTACAAAAATGATATTCCCACCTCATTTCAT
ACTGCTAATGGAAAATATTTCTGGGATTACTTTTCGAAAGAACCAAAATTAGGTGATATT
TTCAATGATGTAATGGCTAGTGAGTCGGGATTGATTGTCAATATGCTTATCACGGAGTGT
AGGCACGTTTTTGAGGGGTTGACATCATTGGTAGACGTTGGAGGTGGCACTGGCACGATG
GCGATCGCCATAGCCAAAGCTTTTCCTTCCATAAATTGCATTGTATTTGATCTTCCACAT
GTTATAGAGGACCTCAAGAGCAATGGAAACATGGAGTTTGTTGGAGGTGACATGTTTCAA
AAGATTCCTAATGCTAATGCAATCTTACTCAAGTGGATTTTACATAACTGGAATGACGAA
GATTGTGTGAAGATACTGAAAAAATGCAAAGAGTCAATTCCGAGTAGGGATGAAGGGGGG
AAATTGATCATTATTGACATTGTGTTGGAAGATCCAAAGAACATGAGTGACTATGTTCGA
GCACAACATAATATGGATATGATGATGATGGTTTGTTTTGCTGCTAAAGAGAGAACTAAG
AAGGAATGGGAAAAACTCTTCAATGAAGCTGGTTTCAATGAATGCAAAATAACATCCATT
CCGGGTTCAAGATCTCTGATTGAAGTATATCCTTGA