Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067574
CDS Infomation

pacid=37470442 polypeptide=PGSC0003DMP400045609 locus=PGSC0003DMG402026272 ID=PGSC0003DMT400067574.v4.03 annot-version=v4.03
Sequence

ATGGGAAGAGCTCGGCGATCTCTGCTAATTCCTTCATTGATTTGCGCTATTTCTCTTCTG
CTTACATTTCACAATGCCTCCTCTTTCTATCTCCCCGGTGTTGCGCCTGAAGATTTCCAA
AAGGGAGATCTTCTGTCTGTGAAAGTGAACAAGCTGACCTCTACAAAAACTCAGCTTCCT
TATTCGTTCTATTCTGTTCCTTTCTGTCGTCCAGAAAATATCATTGATAGCAGAGAAAAT
CTTGGAGAAGTGCTTCGTGGTGATCGAATTGAGAACTCCCCTTTTACGTTTAAAATGAGG
GAGCCAGAGATGTGTCATGTTGTTTGTAGGCTTGTACTTGATGACAAGACAGCTAAGGAA
TTTAAAGAAAAAATTGAAGATGAATATCGTGTGAACATGATACTAGATAATCTGCCTTTA
GTTGTTCCAGTTCGGAGGTTAGAGCAAGATGCCCCTCCTGCCTATCAGCAGGGAGTTTAT
ATTGGTGTAAAAGGACAATATGCTGGAAGCAAGGATGAGAAGCATTTCATCCATAACCAC
TTGACATTTACTGTCAAGTACCATAAAGATTTGCAGACAGACTCGGCCAGAATTGTGGGA
TTTGAGGTCATGCCATTTAGTGTTAAGCATGAATATGATGGCAAATGGGCTGACAATACT
CGTTTAACAACATGTGATCCACATGCAAAACGGACAGTATCTAACTCAAATTCTCCTCAA
GAGGTTGAGGCTAACCAAGAAATCATATTTACATATGATGTTGAATTCCAGGAGAGTGAT
GTGAAGTGGGCCTCAAGATGGGATGCCTATCTTTTGATGGCTGATGATCAGATACACTGG
TTCTCGATAGTAAATTCTTTAATGATTGTGCTGTTCCTATCAGGCATGGTGGCAATGATA
ATGTTGAGAACACTTTATCGTGACATTTCCAAGTATAACGAACTGGAAACCCAGGAGGAG
GCACAGGAAGAAACAGGATGGAAACTAGTCCATTCAGATGTTTTCAGGCCTCCAAGTAAC
TCGGATTTGCTTTGTGTCTATGTTGGAACTGGTGTACAGTTTTTCGGTATGATGCTTGTG
ACCATGATGTTTGCCGTCTTGGGGTTCCTCTCCCCTTCAAATCGGGGTGGGCTAATGACT
GCAATGCTCTTGCTCTGGGTTTTCATGGGACTCTTTGCGGGCTACTCTGCTTCCCGTCTT
TATAAGATGTTTAAAGGTACAGAATGGAAGAGAATCGCTCTCAGGACAGCGTTTTTGTTT
CCAGCTACTGTCTTTGTCATCTTCTTCGTGTTAAATGCACTCATCTGGGGTCAAAAATCA
TCTGGGGCTGTGCCATTTGGAACAATGTTTGCTTTGGTGTTCTTATGGTTCGGAATATCA
GTCCCTCTTGTGTTTGTTGGCAGTTACGTTGGTTTTAGAAAGCCAACCATTGAGGATCCA
GTAAAGACAAATAAAATACCCAGGCAGATCCCAGAGCAGGCTTGGTACATGAACCCCATC
TTCTCAGTTCTCATTGGAGGCATACTTCCATTTGGAGCCGTCTTCATTGAGCTCTTTTTC
ATTCTCACCTCAATCTGGCTGAACCAGTTTTACTACCTCTTTGGTTTCCTCTTCATCGTT
TTTGTCATCCTGATAGTCACCTGTGCTGAGATAACCATCGTACTATGCTATTTCCAGTTA
TGCAGTGAGGACTACTTGTGGTGGTGGAGATCCTACTTGACATCAGGCTCGTCCGCACTT
TACCTGTTCCTTTACGCTACCTTCTATTTCTTCACCAAGCTTGACATCACTAAGCCTGTT
TCCGGGATCTTATATTTCGGTTACATGTTGATTGCTTCATATGCATTTTTCGTCCTGACC
GGTACCATCGGTTTCTACGCATGCTTCTGGTTCACAAGACTCATCTACTCGTCTGTGAAG
ATTGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045609
PEP Infomation

pacid=37470442 transcript=PGSC0003DMT400067574 locus=PGSC0003DMG402026272 ID=PGSC0003DMT400067574.v4.03 annot-version=v4.03
Sequence

MGRARRSLLIPSLICAISLLLTFHNASSFYLPGVAPEDFQKGDLLSVKVNKLTSTKTQLP
YSFYSVPFCRPENIIDSRENLGEVLRGDRIENSPFTFKMREPEMCHVVCRLVLDDKTAKE
FKEKIEDEYRVNMILDNLPLVVPVRRLEQDAPPAYQQGVYIGVKGQYAGSKDEKHFIHNH
LTFTVKYHKDLQTDSARIVGFEVMPFSVKHEYDGKWADNTRLTTCDPHAKRTVSNSNSPQ
EVEANQEIIFTYDVEFQESDVKWASRWDAYLLMADDQIHWFSIVNSLMIVLFLSGMVAMI
MLRTLYRDISKYNELETQEEAQEETGWKLVHSDVFRPPSNSDLLCVYVGTGVQFFGMMLV
TMMFAVLGFLSPSNRGGLMTAMLLLWVFMGLFAGYSASRLYKMFKGTEWKRIALRTAFLF
PATVFVIFFVLNALIWGQKSSGAVPFGTMFALVFLWFGISVPLVFVGSYVGFRKPTIEDP
VKTNKIPRQIPEQAWYMNPIFSVLIGGILPFGAVFIELFFILTSIWLNQFYYLFGFLFIV
FVILIVTCAEITIVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLDITKPV
SGILYFGYMLIASYAFFVLTGTIGFYACFWFTRLIYSSVKID*

Transcript Sequence

Transcript ID

PGSC0003DMT400067574
Transcript Infomation

pacid=37470442 locus=PGSC0003DMG402026272 ID=PGSC0003DMT400067574.v4.03 annot-version=v4.03
Sequence

ATGGGAAGAGCTCGGCGATCTCTGCTAATTCCTTCATTGATTTGCGCTATTTCTCTTCTG
CTTACATTTCACAATGCCTCCTCTTTCTATCTCCCCGGTGTTGCGCCTGAAGATTTCCAA
AAGGGAGATCTTCTGTCTGTGAAAGTGAACAAGCTGACCTCTACAAAAACTCAGCTTCCT
TATTCGTTCTATTCTGTTCCTTTCTGTCGTCCAGAAAATATCATTGATAGCAGAGAAAAT
CTTGGAGAAGTGCTTCGTGGTGATCGAATTGAGAACTCCCCTTTTACGTTTAAAATGAGG
GAGCCAGAGATGTGTCATGTTGTTTGTAGGCTTGTACTTGATGACAAGACAGCTAAGGAA
TTTAAAGAAAAAATTGAAGATGAATATCGTGTGAACATGATACTAGATAATCTGCCTTTA
GTTGTTCCAGTTCGGAGGTTAGAGCAAGATGCCCCTCCTGCCTATCAGCAGGGAGTTTAT
ATTGGTGTAAAAGGACAATATGCTGGAAGCAAGGATGAGAAGCATTTCATCCATAACCAC
TTGACATTTACTGTCAAGTACCATAAAGATTTGCAGACAGACTCGGCCAGAATTGTGGGA
TTTGAGGTCATGCCATTTAGTGTTAAGCATGAATATGATGGCAAATGGGCTGACAATACT
CGTTTAACAACATGTGATCCACATGCAAAACGGACAGTATCTAACTCAAATTCTCCTCAA
GAGGTTGAGGCTAACCAAGAAATCATATTTACATATGATGTTGAATTCCAGGAGAGTGAT
GTGAAGTGGGCCTCAAGATGGGATGCCTATCTTTTGATGGCTGATGATCAGATACACTGG
TTCTCGATAGTAAATTCTTTAATGATTGTGCTGTTCCTATCAGGCATGGTGGCAATGATA
ATGTTGAGAACACTTTATCGTGACATTTCCAAGTATAACGAACTGGAAACCCAGGAGGAG
GCACAGGAAGAAACAGGATGGAAACTAGTCCATTCAGATGTTTTCAGGCCTCCAAGTAAC
TCGGATTTGCTTTGTGTCTATGTTGGAACTGGTGTACAGTTTTTCGGTATGATGCTTGTG
ACCATGATGTTTGCCGTCTTGGGGTTCCTCTCCCCTTCAAATCGGGGTGGGCTAATGACT
GCAATGCTCTTGCTCTGGGTTTTCATGGGACTCTTTGCGGGCTACTCTGCTTCCCGTCTT
TATAAGATGTTTAAAGGTACAGAATGGAAGAGAATCGCTCTCAGGACAGCGTTTTTGTTT
CCAGCTACTGTCTTTGTCATCTTCTTCGTGTTAAATGCACTCATCTGGGGTCAAAAATCA
TCTGGGGCTGTGCCATTTGGAACAATGTTTGCTTTGGTGTTCTTATGGTTCGGAATATCA
GTCCCTCTTGTGTTTGTTGGCAGTTACGTTGGTTTTAGAAAGCCAACCATTGAGGATCCA
GTAAAGACAAATAAAATACCCAGGCAGATCCCAGAGCAGGCTTGGTACATGAACCCCATC
TTCTCAGTTCTCATTGGAGGCATACTTCCATTTGGAGCCGTCTTCATTGAGCTCTTTTTC
ATTCTCACCTCAATCTGGCTGAACCAGTTTTACTACCTCTTTGGTTTCCTCTTCATCGTT
TTTGTCATCCTGATAGTCACCTGTGCTGAGATAACCATCGTACTATGCTATTTCCAGTTA
TGCAGTGAGGACTACTTGTGGTGGTGGAGATCCTACTTGACATCAGGCTCGTCCGCACTT
TACCTGTTCCTTTACGCTACCTTCTATTTCTTCACCAAGCTTGACATCACTAAGCCTGTT
TCCGGGATCTTATATTTCGGTTACATGTTGATTGCTTCATATGCATTTTTCGTCCTGACC
GGTACCATCGGTTTCTACGCATGCTTCTGGTTCACAAGACTCATCTACTCGTCTGTGAAG
ATTGATTGA