Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067524
CDS Infomation

pacid=37467863 polypeptide=PGSC0003DMP400045569 locus=PGSC0003DMG400026256 ID=PGSC0003DMT400067524.v4.03 annot-version=v4.03
Sequence

ATGTTCTATCAACTTCACTTTAGAAGCAAAGTTTACTCCTTTTCGTCCCTTCCTTTCTTG
TCATGTAATCGCCATTTTTGTATCTCTTACACCTCTTTTTATCGAAAGCCAGATGACATT
TCAAGCCCAGAAGCATTGCCTGCAGCTCCATCTTCTCGCCAGTCCCATTTGGTACCCTCC
AATAACGTAAAATTTTCAAGAAATGGTCAGTTTTCGTACAAAACAAGACACTCTGAGCAT
CTTGAAATCGATGATGTGGTACTATCGAACAAGAAAATTACAAGTTTTATTCGATCTGGG
GATTTAGATTCTGCGTTTAGAGTTTTCGAGAGTGTGAAGGTTAAGACAGTAATCACATGG
AATTCAATCTTGGCTGGGTTTTCAAGAAAATATGGGTTTCTTGAAGAAGCACGCCAACTG
TTTGATAAAATTCCTGAACCGAATGTTGTGTCGTATAACACTATGTTAGCTTGTTATTGG
AGAAATGCTGATATTCAGGCTGCTAAGAGTTTCTTTGATCAAATGCCGGATAAAGATGTT
GCTTCCTGGAATACCATGATTTCAGGGTTCTCTCAAAATGGGCTGATGGGTGAAGCGGAA
GAGTTGTTTCGGGTAATGCCGGTGAGGAATGAGGTTACTTGGAATGCTATGGTAGCTGGG
TATGTTGAGTCTGGGGAATTGGAATCAGCATTGGAGTTGTTTAAGGAAGCTCCTGTGAAA
GGTGTGATTGCTAAGACAGCGATTGTGACGGGATATATGAGATCAGGAAATGTTGAAATG
GCGGAGAAGATGTTTCAAGAGATGGAAGAGAAGAGTATGGTAACGTGGAACACTATGATT
TCGGGTTACATTGAGAATGGGAGAGCAGAGGATGGTATGAAGCTGGTAAAGAAAATGATG
GGATTGGGTATAAAAGTGAACGACTCAACGTTGAGTAGTCTCTTACTAGGTTGTAGTAAT
TTATCTGCATTGAAATTGGGGAAGCAAGTTCATCAGCATGTCGTTAAGTCCCCTCTATAC
GTGGATATGACAGTGGGAACTTCATTGATTAGCATGTATAGCAAGTGTGGAGTTTTGGAG
GATGCTTGGAAATTGTTTCGTGAGATGCCAAGAAAGGATGTTGTCACTTGGAACGCCATG
ATTTCAGGGTATGCTCAACACGGGGAAAGCGAGAAGGCTCTCAACTTGTTTGATGAGATG
AGGCGTAAAGGAATAAAACCAGATTGGATAACCTTTGTTGGAGTTCTATCAGCCTGTAAC
CATGCAGGTTTGGTCAATCTCGGTATTCAATATTTTGAGCAAATGCAGAATAATTATGGA
GTTAAGCCAAAACCAGACCATTACACTTGTATGGTCGATCTACTTGGACGAGCTGGAAAG
CTAAATGAAGCTGTGGATTTGATAAGAAAGATGCAATTCAAACCCCATATAGCACTATTT
GGATCACTTTTGGGTTCTTGTAGGATCCACAGAAACTTAGAAGTGGCAGAGTTTGCTGCC
AAGAACTTGCTTAGTCTTGAACCTACAAATGCAGCAGGCTATGTTCAACTTGCTAACGTT
TATGCAGCCAAGAACCAATGGGAAGGTGTTTCTAAAGTTCGAAAATCAATGAAAGAAAAT
AAAGTCATCAAAACACCAGGATACAGTTGGATGGAGGTTGGGAGAGTGGTTCATGAGTTC
AGATCAGGGGATAGACTTCATCCAGATCTCGAAAGCATACGCATGAAACTAAAAGATCTC
GAGAAGAAAATGAAGTTAGCAGGTTATGTACCTGATCTCGACTCTTCATTACACGATGTA
GGCGAGGAACAGAAAGAGCAGCTACTTCTGTGGCACAGTGAGAAGTTAGCCATTGCCTTT
GGTTTAATGAAATTGCCACCAGGAATGCCAATTAGGATATTCAAGAACCTCAGAGTTTGT
GGAGATTGCCACCAAGCCACTAAAGTTATATCAGCAATAGAAAATAGGGAAATCATTGTT
AGAGATACAACTAGGTTTCACCATTTCAAAAATGGAACTTGTTCTTGTGGTGATTACTGG
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400045569
PEP Infomation

pacid=37467863 transcript=PGSC0003DMT400067524 locus=PGSC0003DMG400026256 ID=PGSC0003DMT400067524.v4.03 annot-version=v4.03
Sequence

MFYQLHFRSKVYSFSSLPFLSCNRHFCISYTSFYRKPDDISSPEALPAAPSSRQSHLVPS
NNVKFSRNGQFSYKTRHSEHLEIDDVVLSNKKITSFIRSGDLDSAFRVFESVKVKTVITW
NSILAGFSRKYGFLEEARQLFDKIPEPNVVSYNTMLACYWRNADIQAAKSFFDQMPDKDV
ASWNTMISGFSQNGLMGEAEELFRVMPVRNEVTWNAMVAGYVESGELESALELFKEAPVK
GVIAKTAIVTGYMRSGNVEMAEKMFQEMEEKSMVTWNTMISGYIENGRAEDGMKLVKKMM
GLGIKVNDSTLSSLLLGCSNLSALKLGKQVHQHVVKSPLYVDMTVGTSLISMYSKCGVLE
DAWKLFREMPRKDVVTWNAMISGYAQHGESEKALNLFDEMRRKGIKPDWITFVGVLSACN
HAGLVNLGIQYFEQMQNNYGVKPKPDHYTCMVDLLGRAGKLNEAVDLIRKMQFKPHIALF
GSLLGSCRIHRNLEVAEFAAKNLLSLEPTNAAGYVQLANVYAAKNQWEGVSKVRKSMKEN
KVIKTPGYSWMEVGRVVHEFRSGDRLHPDLESIRMKLKDLEKKMKLAGYVPDLDSSLHDV
GEEQKEQLLLWHSEKLAIAFGLMKLPPGMPIRIFKNLRVCGDCHQATKVISAIENREIIV
RDTTRFHHFKNGTCSCGDYW*

Transcript Sequence

Transcript ID

PGSC0003DMT400067524
Transcript Infomation

pacid=37467863 locus=PGSC0003DMG400026256 ID=PGSC0003DMT400067524.v4.03 annot-version=v4.03
Sequence

ATGTTCTATCAACTTCACTTTAGAAGCAAAGTTTACTCCTTTTCGTCCCTTCCTTTCTTG
TCATGTAATCGCCATTTTTGTATCTCTTACACCTCTTTTTATCGAAAGCCAGATGACATT
TCAAGCCCAGAAGCATTGCCTGCAGCTCCATCTTCTCGCCAGTCCCATTTGGTACCCTCC
AATAACGTAAAATTTTCAAGAAATGGTCAGTTTTCGTACAAAACAAGACACTCTGAGCAT
CTTGAAATCGATGATGTGGTACTATCGAACAAGAAAATTACAAGTTTTATTCGATCTGGG
GATTTAGATTCTGCGTTTAGAGTTTTCGAGAGTGTGAAGGTTAAGACAGTAATCACATGG
AATTCAATCTTGGCTGGGTTTTCAAGAAAATATGGGTTTCTTGAAGAAGCACGCCAACTG
TTTGATAAAATTCCTGAACCGAATGTTGTGTCGTATAACACTATGTTAGCTTGTTATTGG
AGAAATGCTGATATTCAGGCTGCTAAGAGTTTCTTTGATCAAATGCCGGATAAAGATGTT
GCTTCCTGGAATACCATGATTTCAGGGTTCTCTCAAAATGGGCTGATGGGTGAAGCGGAA
GAGTTGTTTCGGGTAATGCCGGTGAGGAATGAGGTTACTTGGAATGCTATGGTAGCTGGG
TATGTTGAGTCTGGGGAATTGGAATCAGCATTGGAGTTGTTTAAGGAAGCTCCTGTGAAA
GGTGTGATTGCTAAGACAGCGATTGTGACGGGATATATGAGATCAGGAAATGTTGAAATG
GCGGAGAAGATGTTTCAAGAGATGGAAGAGAAGAGTATGGTAACGTGGAACACTATGATT
TCGGGTTACATTGAGAATGGGAGAGCAGAGGATGGTATGAAGCTGGTAAAGAAAATGATG
GGATTGGGTATAAAAGTGAACGACTCAACGTTGAGTAGTCTCTTACTAGGTTGTAGTAAT
TTATCTGCATTGAAATTGGGGAAGCAAGTTCATCAGCATGTCGTTAAGTCCCCTCTATAC
GTGGATATGACAGTGGGAACTTCATTGATTAGCATGTATAGCAAGTGTGGAGTTTTGGAG
GATGCTTGGAAATTGTTTCGTGAGATGCCAAGAAAGGATGTTGTCACTTGGAACGCCATG
ATTTCAGGGTATGCTCAACACGGGGAAAGCGAGAAGGCTCTCAACTTGTTTGATGAGATG
AGGCGTAAAGGAATAAAACCAGATTGGATAACCTTTGTTGGAGTTCTATCAGCCTGTAAC
CATGCAGGTTTGGTCAATCTCGGTATTCAATATTTTGAGCAAATGCAGAATAATTATGGA
GTTAAGCCAAAACCAGACCATTACACTTGTATGGTCGATCTACTTGGACGAGCTGGAAAG
CTAAATGAAGCTGTGGATTTGATAAGAAAGATGCAATTCAAACCCCATATAGCACTATTT
GGATCACTTTTGGGTTCTTGTAGGATCCACAGAAACTTAGAAGTGGCAGAGTTTGCTGCC
AAGAACTTGCTTAGTCTTGAACCTACAAATGCAGCAGGCTATGTTCAACTTGCTAACGTT
TATGCAGCCAAGAACCAATGGGAAGGTGTTTCTAAAGTTCGAAAATCAATGAAAGAAAAT
AAAGTCATCAAAACACCAGGATACAGTTGGATGGAGGTTGGGAGAGTGGTTCATGAGTTC
AGATCAGGGGATAGACTTCATCCAGATCTCGAAAGCATACGCATGAAACTAAAAGATCTC
GAGAAGAAAATGAAGTTAGCAGGTTATGTACCTGATCTCGACTCTTCATTACACGATGTA
GGCGAGGAACAGAAAGAGCAGCTACTTCTGTGGCACAGTGAGAAGTTAGCCATTGCCTTT
GGTTTAATGAAATTGCCACCAGGAATGCCAATTAGGATATTCAAGAACCTCAGAGTTTGT
GGAGATTGCCACCAAGCCACTAAAGTTATATCAGCAATAGAAAATAGGGAAATCATTGTT
AGAGATACAACTAGGTTTCACCATTTCAAAAATGGAACTTGTTCTTGTGGTGATTACTGG
TAA