Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067506
CDS Infomation

pacid=37468302 polypeptide=PGSC0003DMP400045557 locus=PGSC0003DMG400026248 ID=PGSC0003DMT400067506.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGCAAGGGCCTTGCTATCACTGTGGTGTTACAAGCACTCCTCTTTGGCGTAAT
GGACCACCAGAGAAGCCAATACTTTGCAATGCATGTGGATCTCGGTGGCGAACAAAAGGG
ACACTGGTAAACTATACTCCTCTGCATGCTAGGGCTGAACCAGATGATCTTGAAGATTAC
AGGGTCTCAAGATTCAAAAACTTTCCTGTTAAGAACAAAGAGGTCAAGATGCTGAAACGA
AAGAAAAGTCATGATATTCCTGAAATTGGAATTCTTCCTGAATATCATCAGGGTTTCCAC
CGTAAGGCTTTGGATGAAGATACAAGCAATAGGTCAAGTTCCGGCTCTGCTGTGTCAAAC
ACTGAAAGCTATGGACAATTTGGTAGTGCTGAAGCAAGTGATTTGACAGGCCCCGCCCAA
TCAAATATATGGGATGCAACGGTGCCTTCAAGGAAGAGAACATGTGTCAATCGTCCAAAG
CAATCTTCAGTTGAAAAGCTTACCAAAGACCTGTATACCATCTTACATGAACAACAATGC
TCATACTTCTCTGGATCTTCTGAAGAAGATTTGCTTTTAGAAAGTGACAAGCCTATGGTC
TCCGTTGAAATAGGACATGGAAGTGTGCTCATTCGGCATCCAAGTTCAATAGGTAGAGAA
GAAGAATCAGAAGCCAGCTCTCTGTCGGTTGACAACAAGCACCATTCATCCAATGAAGCT
TATTCACAATTGACTACCCCACCTGTAAATATTAGTAAGGGTGTCAATTCATCAAACCTG
GTAATTCAGAGAACCCAGAAGCCTACTGGTCAAGGAGTGGAACATGAACAGTTTAAAAGG
AGCAGGGACCACCTTGAAAAATTGCAGATTCTTGGACATCATAATTCGCCATTGTGCCAC
ATAGACCTTAAGGATGTACTTAATTATGAAGAATTCACAAGGCATCTGTCAAGTGATGAA
CAACAGCAACTACTAAAGTACTTACCTCCGGTTGATTCTTTTTCACCTCCCGAGAGTCTC
AGGAGCATGTTCGAGAGCTCTCAATTTGAGGAGAATTTGTCTTCCTTCCAGAAACTTCTT
GCAGAAGGCGTTTTTGATAACTCGTTATCTGGGGTGACAGTAGAAGAATGTAGAAACCTG
AAGAGGTTTATGTTGTGCTATTTAATGAAGTCAAAATGGGTGGAACAAGTAAATCTTCTT
AAGGACATGAAATGTAAAAATAGTAGCAGTAGTTCTGAAGTTGCTGGAGGGAGCAATGTT
TTTGGCACAGGTCATTCTGTGAACATGAAGAGACCACGCGATGGGCAACATCCAAAATAT
TTAGGGGTAAACACAACAATGAAGAGCCCCAAGAGGGTGGCGATGAAAAACAGCTATGAA
CAGAAGGAAATCATGGAGAATGATAGCTCTTGCTTCAGTCCAAAAAGCCTTTTCGCATTG
CCATCTGAGAATTCCTTCCGTTTTACAAATGAAAGTTCTGATCAGGACTTGCTGCTGGAT
GTGCCATCCAACAGCTCCTTCCCTCAGGCAGAACTCCTCCTACCAACAGCAAGTTTTGCA
GCTCAAGCAAGCACAAGCAGTAGCTCCATATACCCGCACCTCATCCACCCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400045557
PEP Infomation

pacid=37468302 transcript=PGSC0003DMT400067506 locus=PGSC0003DMG400026248 ID=PGSC0003DMT400067506.v4.03 annot-version=v4.03
Sequence

MGKQGPCYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHARAEPDDLEDY
RVSRFKNFPVKNKEVKMLKRKKSHDIPEIGILPEYHQGFHRKALDEDTSNRSSSGSAVSN
TESYGQFGSAEASDLTGPAQSNIWDATVPSRKRTCVNRPKQSSVEKLTKDLYTILHEQQC
SYFSGSSEEDLLLESDKPMVSVEIGHGSVLIRHPSSIGREEESEASSLSVDNKHHSSNEA
YSQLTTPPVNISKGVNSSNLVIQRTQKPTGQGVEHEQFKRSRDHLEKLQILGHHNSPLCH
IDLKDVLNYEEFTRHLSSDEQQQLLKYLPPVDSFSPPESLRSMFESSQFEENLSSFQKLL
AEGVFDNSLSGVTVEECRNLKRFMLCYLMKSKWVEQVNLLKDMKCKNSSSSSEVAGGSNV
FGTGHSVNMKRPRDGQHPKYLGVNTTMKSPKRVAMKNSYEQKEIMENDSSCFSPKSLFAL
PSENSFRFTNESSDQDLLLDVPSNSSFPQAELLLPTASFAAQASTSSSSIYPHLIHP*

Transcript Sequence

Transcript ID

PGSC0003DMT400067506
Transcript Infomation

pacid=37468302 locus=PGSC0003DMG400026248 ID=PGSC0003DMT400067506.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGCAAGGGCCTTGCTATCACTGTGGTGTTACAAGCACTCCTCTTTGGCGTAAT
GGACCACCAGAGAAGCCAATACTTTGCAATGCATGTGGATCTCGGTGGCGAACAAAAGGG
ACACTGGTAAACTATACTCCTCTGCATGCTAGGGCTGAACCAGATGATCTTGAAGATTAC
AGGGTCTCAAGATTCAAAAACTTTCCTGTTAAGAACAAAGAGGTCAAGATGCTGAAACGA
AAGAAAAGTCATGATATTCCTGAAATTGGAATTCTTCCTGAATATCATCAGGGTTTCCAC
CGTAAGGCTTTGGATGAAGATACAAGCAATAGGTCAAGTTCCGGCTCTGCTGTGTCAAAC
ACTGAAAGCTATGGACAATTTGGTAGTGCTGAAGCAAGTGATTTGACAGGCCCCGCCCAA
TCAAATATATGGGATGCAACGGTGCCTTCAAGGAAGAGAACATGTGTCAATCGTCCAAAG
CAATCTTCAGTTGAAAAGCTTACCAAAGACCTGTATACCATCTTACATGAACAACAATGC
TCATACTTCTCTGGATCTTCTGAAGAAGATTTGCTTTTAGAAAGTGACAAGCCTATGGTC
TCCGTTGAAATAGGACATGGAAGTGTGCTCATTCGGCATCCAAGTTCAATAGGTAGAGAA
GAAGAATCAGAAGCCAGCTCTCTGTCGGTTGACAACAAGCACCATTCATCCAATGAAGCT
TATTCACAATTGACTACCCCACCTGTAAATATTAGTAAGGGTGTCAATTCATCAAACCTG
GTAATTCAGAGAACCCAGAAGCCTACTGGTCAAGGAGTGGAACATGAACAGTTTAAAAGG
AGCAGGGACCACCTTGAAAAATTGCAGATTCTTGGACATCATAATTCGCCATTGTGCCAC
ATAGACCTTAAGGATGTACTTAATTATGAAGAATTCACAAGGCATCTGTCAAGTGATGAA
CAACAGCAACTACTAAAGTACTTACCTCCGGTTGATTCTTTTTCACCTCCCGAGAGTCTC
AGGAGCATGTTCGAGAGCTCTCAATTTGAGGAGAATTTGTCTTCCTTCCAGAAACTTCTT
GCAGAAGGCGTTTTTGATAACTCGTTATCTGGGGTGACAGTAGAAGAATGTAGAAACCTG
AAGAGGTTTATGTTGTGCTATTTAATGAAGTCAAAATGGGTGGAACAAGTAAATCTTCTT
AAGGACATGAAATGTAAAAATAGTAGCAGTAGTTCTGAAGTTGCTGGAGGGAGCAATGTT
TTTGGCACAGGTCATTCTGTGAACATGAAGAGACCACGCGATGGGCAACATCCAAAATAT
TTAGGGGTAAACACAACAATGAAGAGCCCCAAGAGGGTGGCGATGAAAAACAGCTATGAA
CAGAAGGAAATCATGGAGAATGATAGCTCTTGCTTCAGTCCAAAAAGCCTTTTCGCATTG
CCATCTGAGAATTCCTTCCGTTTTACAAATGAAAGTTCTGATCAGGACTTGCTGCTGGAT
GTGCCATCCAACAGCTCCTTCCCTCAGGCAGAACTCCTCCTACCAACAGCAAGTTTTGCA
GCTCAAGCAAGCACAAGCAGTAGCTCCATATACCCGCACCTCATCCACCCCTAG