Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067485
CDS Infomation

pacid=37469449 polypeptide=PGSC0003DMP400045541 locus=PGSC0003DMG400026239 ID=PGSC0003DMT400067485.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAAGAAGATTCGACGAATCCTCACTACTTCCTCATTCTGTTACCGGCGGTTCC
GGTCTTCGGTCTTCTCCTCCACCTCGCCCTCCGAACTACACTTGTCACCGTGTACAGGGA
GCATTGAAGCATTTGGCATCAATTGATCCACTGGAATTATGTGATGAGGCCAAAGTAGAG
CACTGCCGAGCAACTAGAGATCTAAGAAGTTGTGGACGACATGTACAGAGTGTGTTGAAT
TCATGTGGTCATGCCTCTTTATGCGAGGAATGCAGTCAGAGATGTGATGTTTGCCCTATA
TGTAGGATCCCATTACCAAAAGATGCCAATAGACTTCGACTACGCCTATATTACGAGTGC
ATAGAGGCAGGTCTCATCTCCAAGAGGTGTGATGACAGATTACAAGAGAAAGAGGACAGT
GATAAGCAACTGGTTGCTGATATCCAGCGTCTTTATGCTTTGTTTGATGTGGCACTGGAA
AACAATCTGGTTTCTCTAATATGCCACTATGTGACAGATGTTTGTATGGATGAAAGTGCT
GTGTCCAGTGATCCCATCATTGCCTTCTTGCTTGATGAAGTGGTGGTCAAAGATTGGTGC
AAGAGGACGTTCAACAATATTCTGACCGAGATTCAAGTGATATATAATCTAACCATGAAT
GAACTGAAAGAGAACTTGAGTTTATTTTTCAAGTTCTCTGTGAAGTTAGGTGGTATCTCT
AACGTTATTGATGTCTTGGAATCATCGTTTAAAGGCTCTCTTTCTGCAAAGCTTCATGAT
TTACACCACCTTCAAGAGAGCATCTTAAAGACAAAACAGCACATGGAGATAATGATTTGG
TGTATAAGACATGAGTTCTTGGAGAATGTGAAGTCTAGGCATAAAAATTATGCATCGTGG
CGAGCTCTGGTCCGTGAAAGGAAATCTGCTGCAATTAAACGTGCATGGCCCGATTCAGTA
AATCATTCTGATGAATACAATGCTTCAACACTCTTTATTGAAGATGCTCTTTCGAATATT
GAAGCAGCAGAGCAGGGAGACTTGGATGATCATGAAGAAGAGTTAGCACTTGCCTATTTA
CAGAAGGATGAGGGCTCTTTATATTCACGGTCAAAAATTGAGGGAATGGCTGGATGCTAT
CCATTTGAAAGTTTGCGGGCTGCTGCTGACATTCTCTTTTTACGAGGAAGTTCAGACTTG
GTAGTTGCAAAACAAGCAATTTTCTTGTATTTTATGTTTGACCGGCAATGGACAGTACCT
GATGAGCAGTGGAGACACATCATTGATGATTTTGCTGCCACTTTTGGTGTGACCAGGCAC
TCGCTATTGGAATCCTTTACATTTTTCCTCTTAGATGATGAAGGAGTTCCGGCTCTGAAG
GAAGCCTGTCAACTTCTCCCAGAAATATCAAACCCAACAATCCACCCGAAGGTTGCTCAG
GTTCTGTTGGAGCGGGGAAACCCTGATGCAGCTCTCATGGTTCTGAGGTGGTCTGGACAA
GATGGCACACAGCTAATTTCACTTCGTGAGGCTGTAACTGCTGTCCGTGTGCGGGTAGAA
TGTGGACTTTTGACTGAAACATTCACGTATCAGAGGCTTATCTGTGCTAAGATCAAGGAG
AAAAAGTTGAGGGATGAACAGTTTCAGAGTGCTTCTGCTGAAGTAGAGGACCAATGCAGG
TCGTGGGGTCTCTGGGTGGAGACTCTTGTCACTGAGATTTGTTGTCTGTGCATTAGGAGG
AACTTAGTTGACCGCATGATAGAACTGCCATGGACTGCTGATGAGGAGAAGCATCTTCAT
AAATGTCTGCTGGATTTTGCTGCCGAGGATCCTTCAACGCCCATAGGAAGTCTTCTTGTA
GTTTTCTACTTGCAGCGTCATAGATATGTTGAAGCATACCAGGTTGATCAGAAGCTTCAG
AGCATGGAGGAGACCTTCATTTCTCAAAATTCTGTCAGTGAAGAAGTCTTAGCGAGGATC
AGATCAATAAATCATTGGAGGACTTGTTTGGTTGACAAGGGAGTAGAGTTGTTACCAGAT
ATCATACAACAACAAATAAGGACAGGGAAGTTGCCTGAAGTGGTTGTTACTTGCAATGAC
ACAGTCAACATCTCTGAGAGGTCCAATGCTGTAGCCCAAGAACCTATCATGACCAGTTTA
TTGGCTAATCCTCCCAGCGATTCTAGCCTCATTCAGCGAGTTGATGTTGTTAAACCTTCT
GTTCTTGACGCTCCATCTGTACTTGGGGGATCATTAAATCTGTCGAGCTTTAAAGTTGGG
CGTTATAGTTCTCCCAGTTCCCCAGCTTTTTTTAATGATGCTGGAGTATTGAAACCTGAA
AGTATCCTTGGGAAAAAATTGAAATTTGATGAGATTTCGACCCCTGCAAGTCGTCGTGTT
AATCCTCCTGCTCCTGTAATGAAGATCACCAGGAATTCGTCCATGGAACCTTCTATTAGC
CGTCTTCGCAATTCTCAAATATATAGAGTTTCGCCTGAGAAGTCTCAGAATGGGTTTCCA
AAGGAATCTTATATTTTTGACCAGACTGCTGCTAACAATGTAAATTCTCTTAGTAGCAAC
AGAGGCATATTAAAACATTCAGTTGAAGATTCAGACATGAGTTATCATGGTAAACGTCTA
CTGTCAGATGCTGCTGATAGATCACGGATGTTACCATTAAATGATTCAATGGATGTAACC
TGGAGCCATGAAGAAAAGGGTCCTTCCACCGTGCATCTAGAAACCAATGGCGGACCAAGG
TGGAGGTCTGATGATACCAGTGAAGACGAGGAAATCCCCTCACTAGATGTATTCGCTGGA
GTTGTCTCTCCTGCACACACTTCAAGGGGAGTGAGAAGAAGCAGGAGGATTGCCAGGAGA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400045541
PEP Infomation

pacid=37469449 transcript=PGSC0003DMT400067485 locus=PGSC0003DMG400026239 ID=PGSC0003DMT400067485.v4.03 annot-version=v4.03
Sequence

MERRRFDESSLLPHSVTGGSGLRSSPPPRPPNYTCHRVQGALKHLASIDPLELCDEAKVE
HCRATRDLRSCGRHVQSVLNSCGHASLCEECSQRCDVCPICRIPLPKDANRLRLRLYYEC
IEAGLISKRCDDRLQEKEDSDKQLVADIQRLYALFDVALENNLVSLICHYVTDVCMDESA
VSSDPIIAFLLDEVVVKDWCKRTFNNILTEIQVIYNLTMNELKENLSLFFKFSVKLGGIS
NVIDVLESSFKGSLSAKLHDLHHLQESILKTKQHMEIMIWCIRHEFLENVKSRHKNYASW
RALVRERKSAAIKRAWPDSVNHSDEYNASTLFIEDALSNIEAAEQGDLDDHEEELALAYL
QKDEGSLYSRSKIEGMAGCYPFESLRAAADILFLRGSSDLVVAKQAIFLYFMFDRQWTVP
DEQWRHIIDDFAATFGVTRHSLLESFTFFLLDDEGVPALKEACQLLPEISNPTIHPKVAQ
VLLERGNPDAALMVLRWSGQDGTQLISLREAVTAVRVRVECGLLTETFTYQRLICAKIKE
KKLRDEQFQSASAEVEDQCRSWGLWVETLVTEICCLCIRRNLVDRMIELPWTADEEKHLH
KCLLDFAAEDPSTPIGSLLVVFYLQRHRYVEAYQVDQKLQSMEETFISQNSVSEEVLARI
RSINHWRTCLVDKGVELLPDIIQQQIRTGKLPEVVVTCNDTVNISERSNAVAQEPIMTSL
LANPPSDSSLIQRVDVVKPSVLDAPSVLGGSLNLSSFKVGRYSSPSSPAFFNDAGVLKPE
SILGKKLKFDEISTPASRRVNPPAPVMKITRNSSMEPSISRLRNSQIYRVSPEKSQNGFP
KESYIFDQTAANNVNSLSSNRGILKHSVEDSDMSYHGKRLLSDAADRSRMLPLNDSMDVT
WSHEEKGPSTVHLETNGGPRWRSDDTSEDEEIPSLDVFAGVVSPAHTSRGVRRSRRIARR
*

Transcript Sequence

Transcript ID

PGSC0003DMT400067485
Transcript Infomation

pacid=37469449 locus=PGSC0003DMG400026239 ID=PGSC0003DMT400067485.v4.03 annot-version=v4.03
Sequence

ATGGAGAGAAGAAGATTCGACGAATCCTCACTACTTCCTCATTCTGTTACCGGCGGTTCC
GGTCTTCGGTCTTCTCCTCCACCTCGCCCTCCGAACTACACTTGTCACCGTGTACAGGGA
GCATTGAAGCATTTGGCATCAATTGATCCACTGGAATTATGTGATGAGGCCAAAGTAGAG
CACTGCCGAGCAACTAGAGATCTAAGAAGTTGTGGACGACATGTACAGAGTGTGTTGAAT
TCATGTGGTCATGCCTCTTTATGCGAGGAATGCAGTCAGAGATGTGATGTTTGCCCTATA
TGTAGGATCCCATTACCAAAAGATGCCAATAGACTTCGACTACGCCTATATTACGAGTGC
ATAGAGGCAGGTCTCATCTCCAAGAGGTGTGATGACAGATTACAAGAGAAAGAGGACAGT
GATAAGCAACTGGTTGCTGATATCCAGCGTCTTTATGCTTTGTTTGATGTGGCACTGGAA
AACAATCTGGTTTCTCTAATATGCCACTATGTGACAGATGTTTGTATGGATGAAAGTGCT
GTGTCCAGTGATCCCATCATTGCCTTCTTGCTTGATGAAGTGGTGGTCAAAGATTGGTGC
AAGAGGACGTTCAACAATATTCTGACCGAGATTCAAGTGATATATAATCTAACCATGAAT
GAACTGAAAGAGAACTTGAGTTTATTTTTCAAGTTCTCTGTGAAGTTAGGTGGTATCTCT
AACGTTATTGATGTCTTGGAATCATCGTTTAAAGGCTCTCTTTCTGCAAAGCTTCATGAT
TTACACCACCTTCAAGAGAGCATCTTAAAGACAAAACAGCACATGGAGATAATGATTTGG
TGTATAAGACATGAGTTCTTGGAGAATGTGAAGTCTAGGCATAAAAATTATGCATCGTGG
CGAGCTCTGGTCCGTGAAAGGAAATCTGCTGCAATTAAACGTGCATGGCCCGATTCAGTA
AATCATTCTGATGAATACAATGCTTCAACACTCTTTATTGAAGATGCTCTTTCGAATATT
GAAGCAGCAGAGCAGGGAGACTTGGATGATCATGAAGAAGAGTTAGCACTTGCCTATTTA
CAGAAGGATGAGGGCTCTTTATATTCACGGTCAAAAATTGAGGGAATGGCTGGATGCTAT
CCATTTGAAAGTTTGCGGGCTGCTGCTGACATTCTCTTTTTACGAGGAAGTTCAGACTTG
GTAGTTGCAAAACAAGCAATTTTCTTGTATTTTATGTTTGACCGGCAATGGACAGTACCT
GATGAGCAGTGGAGACACATCATTGATGATTTTGCTGCCACTTTTGGTGTGACCAGGCAC
TCGCTATTGGAATCCTTTACATTTTTCCTCTTAGATGATGAAGGAGTTCCGGCTCTGAAG
GAAGCCTGTCAACTTCTCCCAGAAATATCAAACCCAACAATCCACCCGAAGGTTGCTCAG
GTTCTGTTGGAGCGGGGAAACCCTGATGCAGCTCTCATGGTTCTGAGGTGGTCTGGACAA
GATGGCACACAGCTAATTTCACTTCGTGAGGCTGTAACTGCTGTCCGTGTGCGGGTAGAA
TGTGGACTTTTGACTGAAACATTCACGTATCAGAGGCTTATCTGTGCTAAGATCAAGGAG
AAAAAGTTGAGGGATGAACAGTTTCAGAGTGCTTCTGCTGAAGTAGAGGACCAATGCAGG
TCGTGGGGTCTCTGGGTGGAGACTCTTGTCACTGAGATTTGTTGTCTGTGCATTAGGAGG
AACTTAGTTGACCGCATGATAGAACTGCCATGGACTGCTGATGAGGAGAAGCATCTTCAT
AAATGTCTGCTGGATTTTGCTGCCGAGGATCCTTCAACGCCCATAGGAAGTCTTCTTGTA
GTTTTCTACTTGCAGCGTCATAGATATGTTGAAGCATACCAGGTTGATCAGAAGCTTCAG
AGCATGGAGGAGACCTTCATTTCTCAAAATTCTGTCAGTGAAGAAGTCTTAGCGAGGATC
AGATCAATAAATCATTGGAGGACTTGTTTGGTTGACAAGGGAGTAGAGTTGTTACCAGAT
ATCATACAACAACAAATAAGGACAGGGAAGTTGCCTGAAGTGGTTGTTACTTGCAATGAC
ACAGTCAACATCTCTGAGAGGTCCAATGCTGTAGCCCAAGAACCTATCATGACCAGTTTA
TTGGCTAATCCTCCCAGCGATTCTAGCCTCATTCAGCGAGTTGATGTTGTTAAACCTTCT
GTTCTTGACGCTCCATCTGTACTTGGGGGATCATTAAATCTGTCGAGCTTTAAAGTTGGG
CGTTATAGTTCTCCCAGTTCCCCAGCTTTTTTTAATGATGCTGGAGTATTGAAACCTGAA
AGTATCCTTGGGAAAAAATTGAAATTTGATGAGATTTCGACCCCTGCAAGTCGTCGTGTT
AATCCTCCTGCTCCTGTAATGAAGATCACCAGGAATTCGTCCATGGAACCTTCTATTAGC
CGTCTTCGCAATTCTCAAATATATAGAGTTTCGCCTGAGAAGTCTCAGAATGGGTTTCCA
AAGGAATCTTATATTTTTGACCAGACTGCTGCTAACAATGTAAATTCTCTTAGTAGCAAC
AGAGGCATATTAAAACATTCAGTTGAAGATTCAGACATGAGTTATCATGGTAAACGTCTA
CTGTCAGATGCTGCTGATAGATCACGGATGTTACCATTAAATGATTCAATGGATGTAACC
TGGAGCCATGAAGAAAAGGGTCCTTCCACCGTGCATCTAGAAACCAATGGCGGACCAAGG
TGGAGGTCTGATGATACCAGTGAAGACGAGGAAATCCCCTCACTAGATGTATTCGCTGGA
GTTGTCTCTCCTGCACACACTTCAAGGGGAGTGAGAAGAAGCAGGAGGATTGCCAGGAGA
TGA