Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067481
CDS Infomation

pacid=37470574 polypeptide=PGSC0003DMP400045537 locus=PGSC0003DMG400026236 ID=PGSC0003DMT400067481.v4.03 annot-version=v4.03
Sequence

ATGGGTCATCGTGGATTTTCATCTTCATCACTAGTCTTCTTCATCTTGATTCTTATTGGG
GTTCCAATATCATCATCAGTCCCTTTCATAGTTCTCCATGGAATTGGAGATCAGTGTTCG
CATCGTGGAGTCAAACGATTCACAGAGGAGCTAAGAGAATGGTCAAAATCTGAAGGATAT
TGCTTGGAAATTGGAAATGGATCATGGGACTCCTGGTTTGTGACTTTAGAGGATCAGGCT
GATGTAGTGTGTAGCAAGGTTAAGAAAATGAAAGAACTCCAAGATGGTTACAACATTGTT
GGTCTCTCTCAGGGTAACCTAATAGGCCGAGCTGTTGTGGAATATTGTGAGGGAGGACCA
CAGGTTAAGAATTTGATTTCCTTAGGAGGACCTCATGCTGGCACTGCTTCAGTTCCTCTC
TGTGGTTCTGGCATTTTTTGCATAATTGCTGATAATCTAATCAAGTCAGAGATATACTCC
GATTTTGTCCAGGCTCACTTGGCTCCTAGTGGTTATCTCAAGCTTCCAAATAATATTCCT
GGGTACATGAAAAGCTGCCGGTTTCTCCCAAAGTTTAACAATGAAATCCCCAGTCATAGA
AATTCCATATATAAGAAACGGTTCAGCAGCTTGGAGAATCTTGTCCTTATCATGTTTGAA
CATGATACTGTTTTGATACCAAAGGAGACTTCTTGGTTTGGATACTATCCAGATGGGGCC
TTTGAACCTATTTTGCCAGCACAGAAGACTCAGCTGTATACTGAGGATTGGATCGGTTTG
AAAACCTTGGACGATGCTGGGAAGGTGAAATATGTCAAAGTAGCCGGGAATCATCTCCAA
ATTTCTTCCAGTGATATGAAAAAGCATGTTGTTCCTTACTTAGCAGCGAATGCATCAACA
GACGGGAGCTTTTCAAACGTGGAACGCATGGCATTACATGATTTGCAAGACGATGCATCA
AGTATTTTTACTTTTGAAGGTTCGTCATCTTATAAATGGCCTGCACCTGTCAATACCTTC
TTCGCGGAACTAGTTGGCTTGACCATAGATCAGCAGTCTATTGACACTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045537
PEP Infomation

pacid=37470574 transcript=PGSC0003DMT400067481 locus=PGSC0003DMG400026236 ID=PGSC0003DMT400067481.v4.03 annot-version=v4.03
Sequence

MGHRGFSSSSLVFFILILIGVPISSSVPFIVLHGIGDQCSHRGVKRFTEELREWSKSEGY
CLEIGNGSWDSWFVTLEDQADVVCSKVKKMKELQDGYNIVGLSQGNLIGRAVVEYCEGGP
QVKNLISLGGPHAGTASVPLCGSGIFCIIADNLIKSEIYSDFVQAHLAPSGYLKLPNNIP
GYMKSCRFLPKFNNEIPSHRNSIYKKRFSSLENLVLIMFEHDTVLIPKETSWFGYYPDGA
FEPILPAQKTQLYTEDWIGLKTLDDAGKVKYVKVAGNHLQISSSDMKKHVVPYLAANAST
DGSFSNVERMALHDLQDDASSIFTFEGSSSYKWPAPVNTFFAELVGLTIDQQSIDT*

Transcript Sequence

Transcript ID

PGSC0003DMT400067481
Transcript Infomation

pacid=37470574 locus=PGSC0003DMG400026236 ID=PGSC0003DMT400067481.v4.03 annot-version=v4.03
Sequence

ATGGGTCATCGTGGATTTTCATCTTCATCACTAGTCTTCTTCATCTTGATTCTTATTGGG
GTTCCAATATCATCATCAGTCCCTTTCATAGTTCTCCATGGAATTGGAGATCAGTGTTCG
CATCGTGGAGTCAAACGATTCACAGAGGAGCTAAGAGAATGGTCAAAATCTGAAGGATAT
TGCTTGGAAATTGGAAATGGATCATGGGACTCCTGGTTTGTGACTTTAGAGGATCAGGCT
GATGTAGTGTGTAGCAAGGTTAAGAAAATGAAAGAACTCCAAGATGGTTACAACATTGTT
GGTCTCTCTCAGGGTAACCTAATAGGCCGAGCTGTTGTGGAATATTGTGAGGGAGGACCA
CAGGTTAAGAATTTGATTTCCTTAGGAGGACCTCATGCTGGCACTGCTTCAGTTCCTCTC
TGTGGTTCTGGCATTTTTTGCATAATTGCTGATAATCTAATCAAGTCAGAGATATACTCC
GATTTTGTCCAGGCTCACTTGGCTCCTAGTGGTTATCTCAAGCTTCCAAATAATATTCCT
GGGTACATGAAAAGCTGCCGGTTTCTCCCAAAGTTTAACAATGAAATCCCCAGTCATAGA
AATTCCATATATAAGAAACGGTTCAGCAGCTTGGAGAATCTTGTCCTTATCATGTTTGAA
CATGATACTGTTTTGATACCAAAGGAGACTTCTTGGTTTGGATACTATCCAGATGGGGCC
TTTGAACCTATTTTGCCAGCACAGAAGACTCAGCTGTATACTGAGGATTGGATCGGTTTG
AAAACCTTGGACGATGCTGGGAAGGTGAAATATGTCAAAGTAGCCGGGAATCATCTCCAA
ATTTCTTCCAGTGATATGAAAAAGCATGTTGTTCCTTACTTAGCAGCGAATGCATCAACA
GACGGGAGCTTTTCAAACGTGGAACGCATGGCATTACATGATTTGCAAGACGATGCATCA
AGTATTTTTACTTTTGAAGGTTCGTCATCTTATAAATGGCCTGCACCTGTCAATACCTTC
TTCGCGGAACTAGTTGGCTTGACCATAGATCAGCAGTCTATTGACACTTGA