Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067478
CDS Infomation

pacid=37470849 polypeptide=PGSC0003DMP400045534 locus=PGSC0003DMG402026234 ID=PGSC0003DMT400067478.v4.03 annot-version=v4.03
Sequence

ATGGCTAGATGGGATCAAATTCTTTCCCTTCCTGTTCAGAGCCCCCCGAGTTTGGAGTTT
TCTTCTGCTGAACTTGTGTGGTCTAAAGTAGAAGGCTGGCGCGATAACATAGACAGAGTT
GCTCTCATTCCATTTGCTAGAGTAGATGACTTTGTTAGGGGTGAATCTGCTAATAAAGAA
TGTCCAACAAGATTTCATGTTGAAGCTCGGAGACGACGGCCTGCAGAGTCGACGTACAAG
CCTAAAGTTGATGGCATCCTTGAATATATTCTGTACTGGTGCTCGTTTGGTCCTGATGAT
CATAGAAAAGGTGGAGTTGTTCGACCAAGTAGAACCACATACGTTCCTAAGAAAAAACCT
TCTGGTCGACCTAATACAAAGAGGGGGTGCACCTGCCACTTTATTGTCAAACGCTTAATT
GCTGAACCGTCTGTAGCACTTATCATCTATAACCAAGATAAGCACATGGATAAGAAAGGA
TTACCATGCCATGGCCCACAGGACAAAAAGTCTGCTGGAACACGTGCCATGTATGCTCCA
TACATCTCAGAGGATCTTCGTCTCCGTGTTTTGTCCCTGCTCTATGTTGGGGTGTCTGTG
GAAACAATCATGCAGAGACACAATGAATCAGTGGAGAGACAAGGAGGTCCGTGCAACCGA
GATGACCTTTTAACTCACAGATATGTTCGGAGACAAGAGAGGAGCATACGGCGCTCGACT
TATGAACTTGACACAGATGATGCAGTCAGCATTAATATGTGGGTTGAAAGTCACCAGAAT
CAAGTGTTCTTTTATGAGAATTTCTCTGATTCCGACCCTTTTGTTTTGGGTATTCAAACA
GAATGGCAGTTACAACAACTGATTCGGTTTGGAAATCACGGCCTTCTGGCCTCTGATTCG
AAGTTTGGAACTAATAAATTAAAGTATCCTATTCGCAGTCTTGTTGTGTTCAACTCAGAC
AACAAGGCTATACCGGTGGCATGGATAATAACACCTAGATTTGCAAGTGGAGATACACTT
AGATGGATGAGGGCCCTATATAACAGAGTTCATATGAAAGATCCTAAGTGGAAGTTGGCT
GGATTCATTGTGGATGATCCTTCAGCTGACATCCTTGCAATCAGGGAAGTGTTCCAGTGC
TCTGTATTGATATGCTTTTGGCGGGTTCGTCATGCATGGCATAAGAACTTGATTAAGAAA
TGCTCGGAACTGGAGACCTGTGCCGTAATTGCAAAGAGGCTAGGCCAGGCAGTGCAGCGC
ATCTGCAAAGGGGATGGAACTGCTGATTTGTTTGAAGAATTTATGGAAGATTTTGTGGAT
GCTGCAGATTTTTCGGACTATTTCAAGGCCATATGGTACCCAAGACTAGGGCTCTGGACT
AGTGCACTGAGAACTCTTCCTCTTGCCAGCCAGGAGATGTGCTCGTCAATGGAGTACTAT
CACAACCAATTAAAGCTTAGGTTATTGAATGAGAAGGAAAAAAGTGTATATCAACGTGCT
GATTGGCTAGTAGATAAGCTAGGTACTACAGTGCATTCTTATTTCTGGCTTGATGAGTAC
TCAGGGAAGGATGATTTCGCACGATACTGGAAGGATGAATGGATGAGTGGCTTAACAGCT
TGGCAGAAATCTTTGCAGATTCCAGATTCGGATGTGTTAATTGAGGGTGATTATTCAAAA
GTTGTTGATCAGGAAGATCGACATAAAGTGCATGTTGTTCGGAATCCAGCTTCCGAATAT
GCACTTTGTGATTGTAATTGGGCGAAAATGGGAAACTTATGTGAGCATATTCTTAAAAGC
ATTAAATGTCTACGTGACAAAGGGTCTATTACTCCATCCCTCAGTATGTTCCAATATATG
CAGGCTCTGGTCGATATGTTACACTGCCCACCTCATGATTCTTTGATTCGTGATCATGCA
CTTTCTCTAGCTGTCTGGGTGCAGACGCAGTTGAATGCTCAACTTGGTCCTGGAAGTGGC
CAGTCGAAGCGACAAGCTCTTCAGCTGACTACTGCCACACCTGGTGTGGTGAGAGCAAGC
AATAGAACACACACATTAGTCAATGTGGAAAATGATCTGACTGAGCTCCAGCATCCAAGT
TCTGCCACAGGCAATTTGAGTGGTGGCAAGATTGATCGGGTAGCTACTGAAAATGGCACT
TGCACAGATATAGGTTCTGCTGTGGAACATCCTTCTGTTGAGATGCAAACCAGCCCAGTA
TCCATCTCCGCTTGTGCGACTCAATTGTTTTCTCTTGATGGGATCACATCAGCCAATGTG
TTTGCTGAGAACGGAGATGTCATGATTGATGAGGAGCTGGATACGACGAAGAATATTCCT
TCCACAGATGCATCATTGCAAATTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400045534
PEP Infomation

pacid=37470849 transcript=PGSC0003DMT400067478 locus=PGSC0003DMG402026234 ID=PGSC0003DMT400067478.v4.03 annot-version=v4.03
Sequence

MARWDQILSLPVQSPPSLEFSSAELVWSKVEGWRDNIDRVALIPFARVDDFVRGESANKE
CPTRFHVEARRRRPAESTYKPKVDGILEYILYWCSFGPDDHRKGGVVRPSRTTYVPKKKP
SGRPNTKRGCTCHFIVKRLIAEPSVALIIYNQDKHMDKKGLPCHGPQDKKSAGTRAMYAP
YISEDLRLRVLSLLYVGVSVETIMQRHNESVERQGGPCNRDDLLTHRYVRRQERSIRRST
YELDTDDAVSINMWVESHQNQVFFYENFSDSDPFVLGIQTEWQLQQLIRFGNHGLLASDS
KFGTNKLKYPIRSLVVFNSDNKAIPVAWIITPRFASGDTLRWMRALYNRVHMKDPKWKLA
GFIVDDPSADILAIREVFQCSVLICFWRVRHAWHKNLIKKCSELETCAVIAKRLGQAVQR
ICKGDGTADLFEEFMEDFVDAADFSDYFKAIWYPRLGLWTSALRTLPLASQEMCSSMEYY
HNQLKLRLLNEKEKSVYQRADWLVDKLGTTVHSYFWLDEYSGKDDFARYWKDEWMSGLTA
WQKSLQIPDSDVLIEGDYSKVVDQEDRHKVHVVRNPASEYALCDCNWAKMGNLCEHILKS
IKCLRDKGSITPSLSMFQYMQALVDMLHCPPHDSLIRDHALSLAVWVQTQLNAQLGPGSG
QSKRQALQLTTATPGVVRASNRTHTLVNVENDLTELQHPSSATGNLSGGKIDRVATENGT
CTDIGSAVEHPSVEMQTSPVSISACATQLFSLDGITSANVFAENGDVMIDEELDTTKNIP
STDASLQI*

Transcript Sequence

Transcript ID

PGSC0003DMT400067478
Transcript Infomation

pacid=37470849 locus=PGSC0003DMG402026234 ID=PGSC0003DMT400067478.v4.03 annot-version=v4.03
Sequence

ATGGCTAGATGGGATCAAATTCTTTCCCTTCCTGTTCAGAGCCCCCCGAGTTTGGAGTTT
TCTTCTGCTGAACTTGTGTGGTCTAAAGTAGAAGGCTGGCGCGATAACATAGACAGAGTT
GCTCTCATTCCATTTGCTAGAGTAGATGACTTTGTTAGGGGTGAATCTGCTAATAAAGAA
TGTCCAACAAGATTTCATGTTGAAGCTCGGAGACGACGGCCTGCAGAGTCGACGTACAAG
CCTAAAGTTGATGGCATCCTTGAATATATTCTGTACTGGTGCTCGTTTGGTCCTGATGAT
CATAGAAAAGGTGGAGTTGTTCGACCAAGTAGAACCACATACGTTCCTAAGAAAAAACCT
TCTGGTCGACCTAATACAAAGAGGGGGTGCACCTGCCACTTTATTGTCAAACGCTTAATT
GCTGAACCGTCTGTAGCACTTATCATCTATAACCAAGATAAGCACATGGATAAGAAAGGA
TTACCATGCCATGGCCCACAGGACAAAAAGTCTGCTGGAACACGTGCCATGTATGCTCCA
TACATCTCAGAGGATCTTCGTCTCCGTGTTTTGTCCCTGCTCTATGTTGGGGTGTCTGTG
GAAACAATCATGCAGAGACACAATGAATCAGTGGAGAGACAAGGAGGTCCGTGCAACCGA
GATGACCTTTTAACTCACAGATATGTTCGGAGACAAGAGAGGAGCATACGGCGCTCGACT
TATGAACTTGACACAGATGATGCAGTCAGCATTAATATGTGGGTTGAAAGTCACCAGAAT
CAAGTGTTCTTTTATGAGAATTTCTCTGATTCCGACCCTTTTGTTTTGGGTATTCAAACA
GAATGGCAGTTACAACAACTGATTCGGTTTGGAAATCACGGCCTTCTGGCCTCTGATTCG
AAGTTTGGAACTAATAAATTAAAGTATCCTATTCGCAGTCTTGTTGTGTTCAACTCAGAC
AACAAGGCTATACCGGTGGCATGGATAATAACACCTAGATTTGCAAGTGGAGATACACTT
AGATGGATGAGGGCCCTATATAACAGAGTTCATATGAAAGATCCTAAGTGGAAGTTGGCT
GGATTCATTGTGGATGATCCTTCAGCTGACATCCTTGCAATCAGGGAAGTGTTCCAGTGC
TCTGTATTGATATGCTTTTGGCGGGTTCGTCATGCATGGCATAAGAACTTGATTAAGAAA
TGCTCGGAACTGGAGACCTGTGCCGTAATTGCAAAGAGGCTAGGCCAGGCAGTGCAGCGC
ATCTGCAAAGGGGATGGAACTGCTGATTTGTTTGAAGAATTTATGGAAGATTTTGTGGAT
GCTGCAGATTTTTCGGACTATTTCAAGGCCATATGGTACCCAAGACTAGGGCTCTGGACT
AGTGCACTGAGAACTCTTCCTCTTGCCAGCCAGGAGATGTGCTCGTCAATGGAGTACTAT
CACAACCAATTAAAGCTTAGGTTATTGAATGAGAAGGAAAAAAGTGTATATCAACGTGCT
GATTGGCTAGTAGATAAGCTAGGTACTACAGTGCATTCTTATTTCTGGCTTGATGAGTAC
TCAGGGAAGGATGATTTCGCACGATACTGGAAGGATGAATGGATGAGTGGCTTAACAGCT
TGGCAGAAATCTTTGCAGATTCCAGATTCGGATGTGTTAATTGAGGGTGATTATTCAAAA
GTTGTTGATCAGGAAGATCGACATAAAGTGCATGTTGTTCGGAATCCAGCTTCCGAATAT
GCACTTTGTGATTGTAATTGGGCGAAAATGGGAAACTTATGTGAGCATATTCTTAAAAGC
ATTAAATGTCTACGTGACAAAGGGTCTATTACTCCATCCCTCAGTATGTTCCAATATATG
CAGGCTCTGGTCGATATGTTACACTGCCCACCTCATGATTCTTTGATTCGTGATCATGCA
CTTTCTCTAGCTGTCTGGGTGCAGACGCAGTTGAATGCTCAACTTGGTCCTGGAAGTGGC
CAGTCGAAGCGACAAGCTCTTCAGCTGACTACTGCCACACCTGGTGTGGTGAGAGCAAGC
AATAGAACACACACATTAGTCAATGTGGAAAATGATCTGACTGAGCTCCAGCATCCAAGT
TCTGCCACAGGCAATTTGAGTGGTGGCAAGATTGATCGGGTAGCTACTGAAAATGGCACT
TGCACAGATATAGGTTCTGCTGTGGAACATCCTTCTGTTGAGATGCAAACCAGCCCAGTA
TCCATCTCCGCTTGTGCGACTCAATTGTTTTCTCTTGATGGGATCACATCAGCCAATGTG
TTTGCTGAGAACGGAGATGTCATGATTGATGAGGAGCTGGATACGACGAAGAATATTCCT
TCCACAGATGCATCATTGCAAATTTAG