Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067436
CDS Infomation

pacid=37468993 polypeptide=PGSC0003DMP400045496 locus=PGSC0003DMG400026214 ID=PGSC0003DMT400067436.v4.03 annot-version=v4.03
Sequence

ATGAGTAGGTATGATGCTGTAACTTACTTGAAGTATCTAGACTCACTTAGAGCATCAGAG
AGTTTCCGGTCCGTCTGGATATTTGCAGAGTCCAGTTACAAGATCTTTGAGTATGCTAAA
AAGCGAGTTTATCATTTTGGGAGGACAGATAGTGGAAAACTGGGCCTGAGCAAGACTGTA
TCAACCAAAAAGAGAAAGCTTAATGACAACAAGAAGGATGAAGATCAGTCAACAAGTACA
GAGACCAGAGTTGTTTTGGAGGAAGTCTTGGAGGAGCCACCAAAGTGGAAGGTCTTACTT
GATGTCCTAATGGAGATACAAGAGGAAAGAGATAAACATGCATTGTCTGGAGAAGAGAAA
GATCATCTGGGTGATGGGGATGATAATGGAATTGTTTTAGTTGCTTGCAAAGATGAATAC
TCATGCATGCAACTCAAAGATTGCATCACAAATGGCTCACAGAAGGTCATGCGTGAAGAG
TGGGAAAAGTATCTGTTGAGCAAGGTACAGCTGCAAGCATTGCCAAAACGCAATGCCAAG
AAAGCTAAAGAGCCTAAAGGGTTTGGGGTACTTGATGGTGTTGTTGCAACAGCACCTGGA
AAGAAAGCAGAAGTTAGTAGCATAAGCAAGCAGGAGCATGATGCTCTGCTGGCAGCTGCA
TCGGAAGTTAGCAAAAGAATCAACAAGGATATTGTTGGTGAAGATGATAATCGGAAACAT
GTGGATGGTGGAGGTTCTGTAAAAGGAAAGGGTAAAGGAAAGAAAAAGAAAGGTTCAGCT
GGTGAAAAAACCAACAATGATGTGGCACCTGAAGATGATGCAATGGAAGGCGGATGTTTG
AATGAAGTGTTTCTTCGAAAGCACAACCAAGGTCTGAATGCTGAGTCTTCAAGAGAAATG
AAGAAACTCCCACCAGTGGTTTTCTATGCCTTGGAGAGTGATAAAAAAATTCTTGATATT
TTGAAGCCCTCTACCATTATTGCTTACCATCCTGATATTGCATTTGTGAGAGAGGTTGAA
ATGTATAAAGCTGAGAACCCTTCAAGAAAGGCTAAGGTGTACTTTCTCTTCTATGAAGAC
TCTACTGAGGTGCAAAAGTTTGAGGCAAGTGTGCGTAGAGAAAATGGAGCATTTGAGTCC
CTCATAAGACAGAAATCACTGATGATGATCCCAGTAGATCAGGATGGACGTTGTCTGGGA
CTGGATTCCTCCAATGAGCCTCAGTCCGTTATACCTCAAAATCTTATAACCAGAAAAGCT
GGTGGAAGAAGAGAAGCAGAAAAGGAAATGCAAGTCATTGTTGACATGAGAGAGTTCATG
AGTACTCTTCCTAATGTGCTTCACCAGAAAGGCATGCGCATTATACCAGTGACCTTGGAA
GTTGGTGATTACATACTTTCCCCATTGATATGCGTAGAAAGAAAGAGTATCTCTGATCTA
TTTGGCAGTTTTGCATCCGGCCGTCTTTACCACCAGGTGGAAATGATGTCACGTTATTAC
CGGATTCCTGTTCTTCTTATTGAGTTTTCACAGGATAAAAGCTTTTCATTTCAGTCTGCT
AGTGAAATTGGTGATGACGTAACCCCAAATAGCATTATCTCAAAGCTTTCCTTGCTTGTT
CTCCACTTTCCTCGGCTTCGTATCATCTGGTCTCGCAGTCTGCATGCAACAGCCGAAATA
TTTGCTTCTCTTAAATCAAACCAAGATGAACCTGATGAGGTCAAGGCAATTAGAGTGGGT
GTACCATCAGAAGAGGGTGTTATTGAAAATGATGTCAGAGCTGAAAATTACAATACATCT
GCAGTAGAGATGTTAAGACGGCTGCCAGGCGTGACAGATTCCAACTACAGGGCAATAATG
GATGGTTGCAAAAGCTTAGCGGAACTTGCCATGCTTCCGATGGAGAGATTAGCAGAATTG
ATGGGTGGTCAGAAGGCTGCCAAAATGTTAAGGGAATTCCTTGATGCAAAATACCCAACC
TTGCTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400045496
PEP Infomation

pacid=37468993 transcript=PGSC0003DMT400067436 locus=PGSC0003DMG400026214 ID=PGSC0003DMT400067436.v4.03 annot-version=v4.03
Sequence

MSRYDAVTYLKYLDSLRASESFRSVWIFAESSYKIFEYAKKRVYHFGRTDSGKLGLSKTV
STKKRKLNDNKKDEDQSTSTETRVVLEEVLEEPPKWKVLLDVLMEIQEERDKHALSGEEK
DHLGDGDDNGIVLVACKDEYSCMQLKDCITNGSQKVMREEWEKYLLSKVQLQALPKRNAK
KAKEPKGFGVLDGVVATAPGKKAEVSSISKQEHDALLAAASEVSKRINKDIVGEDDNRKH
VDGGGSVKGKGKGKKKKGSAGEKTNNDVAPEDDAMEGGCLNEVFLRKHNQGLNAESSREM
KKLPPVVFYALESDKKILDILKPSTIIAYHPDIAFVREVEMYKAENPSRKAKVYFLFYED
STEVQKFEASVRRENGAFESLIRQKSLMMIPVDQDGRCLGLDSSNEPQSVIPQNLITRKA
GGRREAEKEMQVIVDMREFMSTLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSISDL
FGSFASGRLYHQVEMMSRYYRIPVLLIEFSQDKSFSFQSASEIGDDVTPNSIISKLSLLV
LHFPRLRIIWSRSLHATAEIFASLKSNQDEPDEVKAIRVGVPSEEGVIENDVRAENYNTS
AVEMLRRLPGVTDSNYRAIMDGCKSLAELAMLPMERLAELMGGQKAAKMLREFLDAKYPT
LL*

Transcript Sequence

Transcript ID

PGSC0003DMT400067436
Transcript Infomation

pacid=37468993 locus=PGSC0003DMG400026214 ID=PGSC0003DMT400067436.v4.03 annot-version=v4.03
Sequence

ATGAGTAGGTATGATGCTGTAACTTACTTGAAGTATCTAGACTCACTTAGAGCATCAGAG
AGTTTCCGGTCCGTCTGGATATTTGCAGAGTCCAGTTACAAGATCTTTGAGTATGCTAAA
AAGCGAGTTTATCATTTTGGGAGGACAGATAGTGGAAAACTGGGCCTGAGCAAGACTGTA
TCAACCAAAAAGAGAAAGCTTAATGACAACAAGAAGGATGAAGATCAGTCAACAAGTACA
GAGACCAGAGTTGTTTTGGAGGAAGTCTTGGAGGAGCCACCAAAGTGGAAGGTCTTACTT
GATGTCCTAATGGAGATACAAGAGGAAAGAGATAAACATGCATTGTCTGGAGAAGAGAAA
GATCATCTGGGTGATGGGGATGATAATGGAATTGTTTTAGTTGCTTGCAAAGATGAATAC
TCATGCATGCAACTCAAAGATTGCATCACAAATGGCTCACAGAAGGTCATGCGTGAAGAG
TGGGAAAAGTATCTGTTGAGCAAGGTACAGCTGCAAGCATTGCCAAAACGCAATGCCAAG
AAAGCTAAAGAGCCTAAAGGGTTTGGGGTACTTGATGGTGTTGTTGCAACAGCACCTGGA
AAGAAAGCAGAAGTTAGTAGCATAAGCAAGCAGGAGCATGATGCTCTGCTGGCAGCTGCA
TCGGAAGTTAGCAAAAGAATCAACAAGGATATTGTTGGTGAAGATGATAATCGGAAACAT
GTGGATGGTGGAGGTTCTGTAAAAGGAAAGGGTAAAGGAAAGAAAAAGAAAGGTTCAGCT
GGTGAAAAAACCAACAATGATGTGGCACCTGAAGATGATGCAATGGAAGGCGGATGTTTG
AATGAAGTGTTTCTTCGAAAGCACAACCAAGGTCTGAATGCTGAGTCTTCAAGAGAAATG
AAGAAACTCCCACCAGTGGTTTTCTATGCCTTGGAGAGTGATAAAAAAATTCTTGATATT
TTGAAGCCCTCTACCATTATTGCTTACCATCCTGATATTGCATTTGTGAGAGAGGTTGAA
ATGTATAAAGCTGAGAACCCTTCAAGAAAGGCTAAGGTGTACTTTCTCTTCTATGAAGAC
TCTACTGAGGTGCAAAAGTTTGAGGCAAGTGTGCGTAGAGAAAATGGAGCATTTGAGTCC
CTCATAAGACAGAAATCACTGATGATGATCCCAGTAGATCAGGATGGACGTTGTCTGGGA
CTGGATTCCTCCAATGAGCCTCAGTCCGTTATACCTCAAAATCTTATAACCAGAAAAGCT
GGTGGAAGAAGAGAAGCAGAAAAGGAAATGCAAGTCATTGTTGACATGAGAGAGTTCATG
AGTACTCTTCCTAATGTGCTTCACCAGAAAGGCATGCGCATTATACCAGTGACCTTGGAA
GTTGGTGATTACATACTTTCCCCATTGATATGCGTAGAAAGAAAGAGTATCTCTGATCTA
TTTGGCAGTTTTGCATCCGGCCGTCTTTACCACCAGGTGGAAATGATGTCACGTTATTAC
CGGATTCCTGTTCTTCTTATTGAGTTTTCACAGGATAAAAGCTTTTCATTTCAGTCTGCT
AGTGAAATTGGTGATGACGTAACCCCAAATAGCATTATCTCAAAGCTTTCCTTGCTTGTT
CTCCACTTTCCTCGGCTTCGTATCATCTGGTCTCGCAGTCTGCATGCAACAGCCGAAATA
TTTGCTTCTCTTAAATCAAACCAAGATGAACCTGATGAGGTCAAGGCAATTAGAGTGGGT
GTACCATCAGAAGAGGGTGTTATTGAAAATGATGTCAGAGCTGAAAATTACAATACATCT
GCAGTAGAGATGTTAAGACGGCTGCCAGGCGTGACAGATTCCAACTACAGGGCAATAATG
GATGGTTGCAAAAGCTTAGCGGAACTTGCCATGCTTCCGATGGAGAGATTAGCAGAATTG
ATGGGTGGTCAGAAGGCTGCCAAAATGTTAAGGGAATTCCTTGATGCAAAATACCCAACC
TTGCTGTAG