Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067346
CDS Infomation

pacid=37432332 polypeptide=PGSC0003DMP400045438 locus=PGSC0003DMG400026185 ID=PGSC0003DMT400067346.v4.03 annot-version=v4.03
Sequence

ATGATTTCAGTAAATCACTCTGTTTCTGGAAATCAAAGTATCGTCTCTTCAGGCGAAAGC
TTTGAATTAGGATTCTTTAAACCTGGTAGTTCGAAAAATTACTATCTTGGTATATGGTAT
AAGAATGTAATTACACAAACAATAGTATGGGTAGCAAACAGGGAGAAGCCACTTTCTGCT
ACTGATATGAATTCTGTTGAGTTGAAAGTTTTGGATGGTAATTTAGTGCTTATTACTGAA
TCCAAAAACTTGTTTTGGTCAACAAATATCAGCAACACAATTAGTTCAAATACACTAGTG
GCAATTCTTTCTGATGATGGTAATTTGATGTTGAGTGATGGATCAAATTCAACTACACCA
CTTTGGCAAAGCTTTGATAACCCGACTGATACATGGTTACCGAATGCTAAGGTGAAGTAT
GACAAGCGTACAAATACAACGAAGATACTTACTTCTTGGAAGAACTCAGAGGATCCTTCT
CCGGGGATTTTTTCCGTGGAGATGGATCAGAGTAATAAGCAGTTCTTGATAAAGTGGAAC
AGGACTGAGCTGTACTCAGCTTCTGGATCTTGGAATGGGCGTATTCTCAGCTTGATGCCT
GAGATGAGTTTGAATTCTGATAGATACAGCTTTACATATGTTGATAATGAAAATGAGAGC
TATTTTATGTATTCCCTTCGTAACTCTTCCAAAATTAGATTAACACTAGATGTCTCTGGG
CAAATCAGGCATCTGATTTGGGCCGAAAATTTAATGGAATGGCAAATTTTTACATCTCAA
CCAAGACAACCGTGCGAGGTGTATGCTAGTTGTGGTGCCTTTAGCATTTGCAATAAGGAG
TCCACGACCTTCTGTAATTGCTTGACTGGTTTCACACCTAAATCCAATACAGAATGGGAC
TTGAATGATCATTCCGGTGGCTGTGTAAGGAAGGAAAGCTTGCAGTGTGGTGATGGTAAA
AAGGGCAGGTTTTTGATGAATCCCAACGTGACATTGCCCGAATATTCCATATCTGTTCCG
GCTGCTAGTGCCGAGGAATGCCATTCTACTTGCTTGAGTAACTGTTCCTCATGTAATGCA
TATGCTTATGATAATAATGTGTGTTCAATTTGGAATGAAGTTGTGAATCTGAAGCAACTC
TCACCAGGAGATGGTAGTGGAAGTGTGATTTATACCAGACTTGCTGTCTCTGACGAAGCA
TACGGTGAAGATGTAAAATCAGGGAAATTTTCCCTGAAGCTTAAAGTTATCATATCTGGC
GTGGTAGCCGTTGCAATTCTACTTCTATGTAGCTTTAGCTACATTTATTGTAGTAGAATG
ATGGCGAAGAAAACAGCAAGCCAACAAAGCACAGGAGGCAATCCCGTGCCACATTGGTTC
AACAGAGAAAAAGAAGCACAAAACCTGATGAACGAAAATGATAAGCAAAACTTCGCCGTT
CCATTCTTTTGTTTCGAAAACATATTAGCAGCCACAGATGATTTCTCAGATGTAAATAAG
CTTGGGCATGGAGATCCAACACTTAGCAAGTCATTGAAATGGAAAAAGCGATTAGAGATC
ATATTAGGAATTTCTCGAGGGCTTCTCTATCTTCATGAAGACTCAAGGCTCAGAATCATT
CATAGAGATCTGAAAACAAGTAACATTCTTTTGGATCAAGAAATGAACCCAAAAATCTCA
GACTTTGGCTTGGCAAGGATAGTTGAAGAACAAACAACAGAAGCAAATACCAATAAAGTG
GTTGGAACTTACGGATATATGTCTCCTGAATATGCATTGGAAGGAGTATTCTCGATTAAG
TCAGACGTATTCAGCTTAGGAGTAGTTATACTGGAGATAGTAACTGGAAGGAGAAACACA
GGATTTTATCAATCTAAAGAAGCATCTAATCTTTTGGTCCATGCATGGAATTACTGGAAA
GAAAAAAGAGCACTACATTTGCTGGATCATTCATTGCTCGAATCATGCAACCCGAAAGAA
GCAATGACGTGCATAAACGTTGGGCTCTTATGTGTGCAAGAAGATCCAGGTGATCGTCCT
ACAATGTCAAATGTTGTGATGATGCTTCATAGTGAAAGTACGTCTCTTCCAAAGCCTAAT
CAACCGGCTTTTGTGTCAAGGAGAAATGTTTCTAATTCATCTTCAGTTTCATCTGGTAAA
CCACCTAGCTTCACCAAAATTGAGTTGACAATCACAGTGGAAGAAGGCCGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400045438
PEP Infomation

pacid=37432332 transcript=PGSC0003DMT400067346 locus=PGSC0003DMG400026185 ID=PGSC0003DMT400067346.v4.03 annot-version=v4.03
Sequence

MISVNHSVSGNQSIVSSGESFELGFFKPGSSKNYYLGIWYKNVITQTIVWVANREKPLSA
TDMNSVELKVLDGNLVLITESKNLFWSTNISNTISSNTLVAILSDDGNLMLSDGSNSTTP
LWQSFDNPTDTWLPNAKVKYDKRTNTTKILTSWKNSEDPSPGIFSVEMDQSNKQFLIKWN
RTELYSASGSWNGRILSLMPEMSLNSDRYSFTYVDNENESYFMYSLRNSSKIRLTLDVSG
QIRHLIWAENLMEWQIFTSQPRQPCEVYASCGAFSICNKESTTFCNCLTGFTPKSNTEWD
LNDHSGGCVRKESLQCGDGKKGRFLMNPNVTLPEYSISVPAASAEECHSTCLSNCSSCNA
YAYDNNVCSIWNEVVNLKQLSPGDGSGSVIYTRLAVSDEAYGEDVKSGKFSLKLKVIISG
VVAVAILLLCSFSYIYCSRMMAKKTASQQSTGGNPVPHWFNREKEAQNLMNENDKQNFAV
PFFCFENILAATDDFSDVNKLGHGDPTLSKSLKWKKRLEIILGISRGLLYLHEDSRLRII
HRDLKTSNILLDQEMNPKISDFGLARIVEEQTTEANTNKVVGTYGYMSPEYALEGVFSIK
SDVFSLGVVILEIVTGRRNTGFYQSKEASNLLVHAWNYWKEKRALHLLDHSLLESCNPKE
AMTCINVGLLCVQEDPGDRPTMSNVVMMLHSESTSLPKPNQPAFVSRRNVSNSSSVSSGK
PPSFTKIELTITVEEGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400067346
Transcript Infomation

pacid=37432332 locus=PGSC0003DMG400026185 ID=PGSC0003DMT400067346.v4.03 annot-version=v4.03
Sequence

ATGATTTCAGTAAATCACTCTGTTTCTGGAAATCAAAGTATCGTCTCTTCAGGCGAAAGC
TTTGAATTAGGATTCTTTAAACCTGGTAGTTCGAAAAATTACTATCTTGGTATATGGTAT
AAGAATGTAATTACACAAACAATAGTATGGGTAGCAAACAGGGAGAAGCCACTTTCTGCT
ACTGATATGAATTCTGTTGAGTTGAAAGTTTTGGATGGTAATTTAGTGCTTATTACTGAA
TCCAAAAACTTGTTTTGGTCAACAAATATCAGCAACACAATTAGTTCAAATACACTAGTG
GCAATTCTTTCTGATGATGGTAATTTGATGTTGAGTGATGGATCAAATTCAACTACACCA
CTTTGGCAAAGCTTTGATAACCCGACTGATACATGGTTACCGAATGCTAAGGTGAAGTAT
GACAAGCGTACAAATACAACGAAGATACTTACTTCTTGGAAGAACTCAGAGGATCCTTCT
CCGGGGATTTTTTCCGTGGAGATGGATCAGAGTAATAAGCAGTTCTTGATAAAGTGGAAC
AGGACTGAGCTGTACTCAGCTTCTGGATCTTGGAATGGGCGTATTCTCAGCTTGATGCCT
GAGATGAGTTTGAATTCTGATAGATACAGCTTTACATATGTTGATAATGAAAATGAGAGC
TATTTTATGTATTCCCTTCGTAACTCTTCCAAAATTAGATTAACACTAGATGTCTCTGGG
CAAATCAGGCATCTGATTTGGGCCGAAAATTTAATGGAATGGCAAATTTTTACATCTCAA
CCAAGACAACCGTGCGAGGTGTATGCTAGTTGTGGTGCCTTTAGCATTTGCAATAAGGAG
TCCACGACCTTCTGTAATTGCTTGACTGGTTTCACACCTAAATCCAATACAGAATGGGAC
TTGAATGATCATTCCGGTGGCTGTGTAAGGAAGGAAAGCTTGCAGTGTGGTGATGGTAAA
AAGGGCAGGTTTTTGATGAATCCCAACGTGACATTGCCCGAATATTCCATATCTGTTCCG
GCTGCTAGTGCCGAGGAATGCCATTCTACTTGCTTGAGTAACTGTTCCTCATGTAATGCA
TATGCTTATGATAATAATGTGTGTTCAATTTGGAATGAAGTTGTGAATCTGAAGCAACTC
TCACCAGGAGATGGTAGTGGAAGTGTGATTTATACCAGACTTGCTGTCTCTGACGAAGCA
TACGGTGAAGATGTAAAATCAGGGAAATTTTCCCTGAAGCTTAAAGTTATCATATCTGGC
GTGGTAGCCGTTGCAATTCTACTTCTATGTAGCTTTAGCTACATTTATTGTAGTAGAATG
ATGGCGAAGAAAACAGCAAGCCAACAAAGCACAGGAGGCAATCCCGTGCCACATTGGTTC
AACAGAGAAAAAGAAGCACAAAACCTGATGAACGAAAATGATAAGCAAAACTTCGCCGTT
CCATTCTTTTGTTTCGAAAACATATTAGCAGCCACAGATGATTTCTCAGATGTAAATAAG
CTTGGGCATGGAGATCCAACACTTAGCAAGTCATTGAAATGGAAAAAGCGATTAGAGATC
ATATTAGGAATTTCTCGAGGGCTTCTCTATCTTCATGAAGACTCAAGGCTCAGAATCATT
CATAGAGATCTGAAAACAAGTAACATTCTTTTGGATCAAGAAATGAACCCAAAAATCTCA
GACTTTGGCTTGGCAAGGATAGTTGAAGAACAAACAACAGAAGCAAATACCAATAAAGTG
GTTGGAACTTACGGATATATGTCTCCTGAATATGCATTGGAAGGAGTATTCTCGATTAAG
TCAGACGTATTCAGCTTAGGAGTAGTTATACTGGAGATAGTAACTGGAAGGAGAAACACA
GGATTTTATCAATCTAAAGAAGCATCTAATCTTTTGGTCCATGCATGGAATTACTGGAAA
GAAAAAAGAGCACTACATTTGCTGGATCATTCATTGCTCGAATCATGCAACCCGAAAGAA
GCAATGACGTGCATAAACGTTGGGCTCTTATGTGTGCAAGAAGATCCAGGTGATCGTCCT
ACAATGTCAAATGTTGTGATGATGCTTCATAGTGAAAGTACGTCTCTTCCAAAGCCTAAT
CAACCGGCTTTTGTGTCAAGGAGAAATGTTTCTAATTCATCTTCAGTTTCATCTGGTAAA
CCACCTAGCTTCACCAAAATTGAGTTGACAATCACAGTGGAAGAAGGCCGATAA