Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400067281
CDS Infomation

pacid=37431410 polypeptide=PGSC0003DMP400045394 locus=PGSC0003DMG400026161 ID=PGSC0003DMT400067281.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGGCAATCATGGAAGCTGTAGCCGAGCTCATCGTAAAGGACTTGTCAAAGCAA
GTGAACATACATGCTCAGTACGCAATACAATTTGAAAGTGAGTTTGAGGTGATGAAGAGA
GAGCTGAATCTCATGCGTTCGTATCTCACTGAAGCAAACAGGCTGAAAGGAAACAATAAC
TCTGTCAAGACTACCTTATCTGAACTTCAAGAACTAATTTATGAAGCAGATAATGTGGTC
ACAGATTGCCAAATCCGCGAAGATCATCTAAGGATGAAAGGGAATCCATCTTGCTTGCTT
CCGTCTCCGAGGGAGATATCTTTCAGATATATCACTGGAAAGAAACTGACAGGACTTAAC
AAGAAGATATTGAAAATGCATCAGAAGCTGAGGACCTTTGTTGGTCCAATAACTGAACAA
TCACGAGGTGACGAAAACATCAGTAGAAGGATAAGATGGACCTCACACATTTTTGATCAA
TCTGAAATTGTGGGGTTATCAGAAGATACAAGAAAAATCAAAGAATGGATCCTTTCTCAT
AGCGATTCATTACATCGCGTTGGCATTGTAGGTATGGGCGGTTTGGGTAAAACCACAATC
GCGCAAAAGGTGTACCATGACAGACAAGTGAATGTGAGATTTCAAAAGAAAGTTTGGGTT
TCTGTATCTCAAACTTATGATGAGCTTCTCATCATGAAGGGTATTTTGAAACAGTTGAAT
GGAGATGATAGTGGAACTGACAAAGGAGATTTGCTTAACAGAATTCTTGAAGCACTTTCA
CATAAGTCATACTTGATTGTCTTGGATGATGTATGGAGCATTGATGATGGATGGTGGGAT
AGAATATCAAGGGGATTACCAAAGTTTGTAGAGCACAATTGTTGTATTATAATTACATCA
AGAAATGATGATGTTGTTAAGAGGATGGGAGCAACAGAATCAAGAATTCATCGACCAAGA
TTGCTCGATGATGAAGAGAGTTGGTCATTGTTCTGTAAATTTGCATTTTTGTCAACTAAA
GGGAAGTGCAATACTCAATTGGAAGAAGTTGGAAGAGAGATCGTGCGCAAATGTCATGGT
CTTCCTCTAGCCATCAAGACCACAGGTGGGATGTTATCATCAAAACCACATTCACTCGGG
GAGTGGACAAGGATATGTGAAAACTTTCGAGAGAAATTGGTATCGGATAGTGAAAGCAAT
ATCTCTGTAATGGCTTCTTTGCAACTAAGTTATGATGAGCTTCCTGCTCATCTAAAACAG
TGTATGTTATGCTTCTCAATCTATCCAGATGACCATGAAATTGAGGCGGAACAATTGGTT
CGTTGGTGGGTAGGGGAAGGATTAGTCCGTGGTAATGGCACAGAAACTGCAACAGATGTA
GCTTTTGGTTATTTGTCTGAACTCGTAAGTCGGTGCTTGGTTGAAGCTGTCCAAAGAAGA
AGCTTTGATGGCAAAGTTTATAGTTGCAAGGTGCATGATATGGTTAGAGACATGACAATT
CTCGTTGCAGAAGACGAGAAATTTTGCAGCTTCAATCGAGGCAGGAACATAGCCACAGTT
AACTCTAGGCACTTGGGGGTCACAAGGGAAACAACTTTTCAGTCCTTATATGGGAACTCA
AAGCTAAGAGCACTTCTTCTCACTACAACAAATTACATCGGCTTCAACAGGAGAATCGCT
CTGGCTGAAATCAAGACTCTCAGGGTCTTGGACTTGTCATGTGTCAAGCTAGATAAAATC
TGTATGATTGATCTATGGCAATGGATCACATCACTAAAGCGACTAGCTTATTTAAATCTG
AGAAATGTTGCAAATTTGGACGAGATTTCAGACTCCGTAAGGAAGTTATGGGGCCTTCAA
ATACTAGTCCTTAGAGAATGCAAGGAACTGAAAATGCTACCAACATCAATCACAACACTT
CCAAGATTGGCAATTCTTGATGTTGGAAGCTGTCCATCCTTGTCATGCTTACCACAAGGT
CTCTCGAGGCTTTCCAATCTTGAAGAGCTGTACGGGTTCAAGATACCGAGTCCAGCAACA
ACAGAAGCTTGTCGCCTGAGTGAAATCGTTGCACTGACTCAACTTCGGGTACTGCACTTA
GACATAATGGAGGAAAGCATGATAGATGACAAGGAATTGGCTGCATTGAAACAACTTGAA
CTACTAAGGGTGTTATCAATCAATGCAGGGGACTGTGAAAACAAGGACATCATAAGGAAG
CTGGATAACTTGTCACCACCAACGCGCGTTGAAGAGTTATATCTAAGGCACTACCTCGGA
GAAACCACACCAGCATGGATAAACCCCATTTCACTTCCCCAACTGCAGTACCTTTGCATC
GAAGATTCAAGAGTGCTTAACCACATGAGTGAAATTTTTTGGGGAGATAATGAGGATAAC
TGGAATGTTGAAGGACTGTGCTTGAAATTCTTGCCAAGGCTGGAGGAAACATGGGAAACA
TTCCAAAGTGCAATGCCATCCCTCAAATACTTAGAAGTCGGCCACTGCAATTCACTGAAA
AATTTCAGATGTAACGTTGAGGGTTTAGGATATTGGACAAAGCCAGAGGAAGAGGAGCAA
AACAAGGGAGATCAAGACGTGATTTCGTGCAACGAAGGAGTTAATGAAGGAGAATTTGAT
GACATGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400045394
PEP Infomation

pacid=37431410 transcript=PGSC0003DMT400067281 locus=PGSC0003DMG400026161 ID=PGSC0003DMT400067281.v4.03 annot-version=v4.03
Sequence

MGEAIMEAVAELIVKDLSKQVNIHAQYAIQFESEFEVMKRELNLMRSYLTEANRLKGNNN
SVKTTLSELQELIYEADNVVTDCQIREDHLRMKGNPSCLLPSPREISFRYITGKKLTGLN
KKILKMHQKLRTFVGPITEQSRGDENISRRIRWTSHIFDQSEIVGLSEDTRKIKEWILSH
SDSLHRVGIVGMGGLGKTTIAQKVYHDRQVNVRFQKKVWVSVSQTYDELLIMKGILKQLN
GDDSGTDKGDLLNRILEALSHKSYLIVLDDVWSIDDGWWDRISRGLPKFVEHNCCIIITS
RNDDVVKRMGATESRIHRPRLLDDEESWSLFCKFAFLSTKGKCNTQLEEVGREIVRKCHG
LPLAIKTTGGMLSSKPHSLGEWTRICENFREKLVSDSESNISVMASLQLSYDELPAHLKQ
CMLCFSIYPDDHEIEAEQLVRWWVGEGLVRGNGTETATDVAFGYLSELVSRCLVEAVQRR
SFDGKVYSCKVHDMVRDMTILVAEDEKFCSFNRGRNIATVNSRHLGVTRETTFQSLYGNS
KLRALLLTTTNYIGFNRRIALAEIKTLRVLDLSCVKLDKICMIDLWQWITSLKRLAYLNL
RNVANLDEISDSVRKLWGLQILVLRECKELKMLPTSITTLPRLAILDVGSCPSLSCLPQG
LSRLSNLEELYGFKIPSPATTEACRLSEIVALTQLRVLHLDIMEESMIDDKELAALKQLE
LLRVLSINAGDCENKDIIRKLDNLSPPTRVEELYLRHYLGETTPAWINPISLPQLQYLCI
EDSRVLNHMSEIFWGDNEDNWNVEGLCLKFLPRLEETWETFQSAMPSLKYLEVGHCNSLK
NFRCNVEGLGYWTKPEEEEQNKGDQDVISCNEGVNEGEFDDMH*

Transcript Sequence

Transcript ID

PGSC0003DMT400067281
Transcript Infomation

pacid=37431410 locus=PGSC0003DMG400026161 ID=PGSC0003DMT400067281.v4.03 annot-version=v4.03
Sequence

ATGGGAGAGGCAATCATGGAAGCTGTAGCCGAGCTCATCGTAAAGGACTTGTCAAAGCAA
GTGAACATACATGCTCAGTACGCAATACAATTTGAAAGTGAGTTTGAGGTGATGAAGAGA
GAGCTGAATCTCATGCGTTCGTATCTCACTGAAGCAAACAGGCTGAAAGGAAACAATAAC
TCTGTCAAGACTACCTTATCTGAACTTCAAGAACTAATTTATGAAGCAGATAATGTGGTC
ACAGATTGCCAAATCCGCGAAGATCATCTAAGGATGAAAGGGAATCCATCTTGCTTGCTT
CCGTCTCCGAGGGAGATATCTTTCAGATATATCACTGGAAAGAAACTGACAGGACTTAAC
AAGAAGATATTGAAAATGCATCAGAAGCTGAGGACCTTTGTTGGTCCAATAACTGAACAA
TCACGAGGTGACGAAAACATCAGTAGAAGGATAAGATGGACCTCACACATTTTTGATCAA
TCTGAAATTGTGGGGTTATCAGAAGATACAAGAAAAATCAAAGAATGGATCCTTTCTCAT
AGCGATTCATTACATCGCGTTGGCATTGTAGGTATGGGCGGTTTGGGTAAAACCACAATC
GCGCAAAAGGTGTACCATGACAGACAAGTGAATGTGAGATTTCAAAAGAAAGTTTGGGTT
TCTGTATCTCAAACTTATGATGAGCTTCTCATCATGAAGGGTATTTTGAAACAGTTGAAT
GGAGATGATAGTGGAACTGACAAAGGAGATTTGCTTAACAGAATTCTTGAAGCACTTTCA
CATAAGTCATACTTGATTGTCTTGGATGATGTATGGAGCATTGATGATGGATGGTGGGAT
AGAATATCAAGGGGATTACCAAAGTTTGTAGAGCACAATTGTTGTATTATAATTACATCA
AGAAATGATGATGTTGTTAAGAGGATGGGAGCAACAGAATCAAGAATTCATCGACCAAGA
TTGCTCGATGATGAAGAGAGTTGGTCATTGTTCTGTAAATTTGCATTTTTGTCAACTAAA
GGGAAGTGCAATACTCAATTGGAAGAAGTTGGAAGAGAGATCGTGCGCAAATGTCATGGT
CTTCCTCTAGCCATCAAGACCACAGGTGGGATGTTATCATCAAAACCACATTCACTCGGG
GAGTGGACAAGGATATGTGAAAACTTTCGAGAGAAATTGGTATCGGATAGTGAAAGCAAT
ATCTCTGTAATGGCTTCTTTGCAACTAAGTTATGATGAGCTTCCTGCTCATCTAAAACAG
TGTATGTTATGCTTCTCAATCTATCCAGATGACCATGAAATTGAGGCGGAACAATTGGTT
CGTTGGTGGGTAGGGGAAGGATTAGTCCGTGGTAATGGCACAGAAACTGCAACAGATGTA
GCTTTTGGTTATTTGTCTGAACTCGTAAGTCGGTGCTTGGTTGAAGCTGTCCAAAGAAGA
AGCTTTGATGGCAAAGTTTATAGTTGCAAGGTGCATGATATGGTTAGAGACATGACAATT
CTCGTTGCAGAAGACGAGAAATTTTGCAGCTTCAATCGAGGCAGGAACATAGCCACAGTT
AACTCTAGGCACTTGGGGGTCACAAGGGAAACAACTTTTCAGTCCTTATATGGGAACTCA
AAGCTAAGAGCACTTCTTCTCACTACAACAAATTACATCGGCTTCAACAGGAGAATCGCT
CTGGCTGAAATCAAGACTCTCAGGGTCTTGGACTTGTCATGTGTCAAGCTAGATAAAATC
TGTATGATTGATCTATGGCAATGGATCACATCACTAAAGCGACTAGCTTATTTAAATCTG
AGAAATGTTGCAAATTTGGACGAGATTTCAGACTCCGTAAGGAAGTTATGGGGCCTTCAA
ATACTAGTCCTTAGAGAATGCAAGGAACTGAAAATGCTACCAACATCAATCACAACACTT
CCAAGATTGGCAATTCTTGATGTTGGAAGCTGTCCATCCTTGTCATGCTTACCACAAGGT
CTCTCGAGGCTTTCCAATCTTGAAGAGCTGTACGGGTTCAAGATACCGAGTCCAGCAACA
ACAGAAGCTTGTCGCCTGAGTGAAATCGTTGCACTGACTCAACTTCGGGTACTGCACTTA
GACATAATGGAGGAAAGCATGATAGATGACAAGGAATTGGCTGCATTGAAACAACTTGAA
CTACTAAGGGTGTTATCAATCAATGCAGGGGACTGTGAAAACAAGGACATCATAAGGAAG
CTGGATAACTTGTCACCACCAACGCGCGTTGAAGAGTTATATCTAAGGCACTACCTCGGA
GAAACCACACCAGCATGGATAAACCCCATTTCACTTCCCCAACTGCAGTACCTTTGCATC
GAAGATTCAAGAGTGCTTAACCACATGAGTGAAATTTTTTGGGGAGATAATGAGGATAAC
TGGAATGTTGAAGGACTGTGCTTGAAATTCTTGCCAAGGCTGGAGGAAACATGGGAAACA
TTCCAAAGTGCAATGCCATCCCTCAAATACTTAGAAGTCGGCCACTGCAATTCACTGAAA
AATTTCAGATGTAACGTTGAGGGTTTAGGATATTGGACAAAGCCAGAGGAAGAGGAGCAA
AACAAGGGAGATCAAGACGTGATTTCGTGCAACGAAGGAGTTAATGAAGGAGAATTTGAT
GACATGCACTGA